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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180487164
OBZO01000019
338155
Bacteroidota
CTC
Glu
>WENV180487311
OBZO01000154
95618
Bacteroidota
TAG
Leu
>WENV180487139
OBZO01000009
411543
Bacteroidota
CTG
Gln
>WENV180487126
OBZO01000007
235182
Bacteroidota
>WENV180487177
OBZO01000031
338132
Bacteroidota
GCA
Cys
>WENV180487119
OBZO01000006
144688
Bacteroidota
CAT
Met
>WENV180487184
OBZO01000037
144933
Bacteroidota
TCT
Arg
>WENV180487118
OBZO01000006
149691
Bacteroidota
GTT
Asn
>WENV180487117
OBZO01000006
149691
Bacteroidota
GTT
Asn
>WENV180487209
OBZO01000051
235207
Bacteroidota
CAT
Met
>WENV180487158
OBZO01000016
144596
Bacteroidota
GGC
Ala
>WENV180487275
OBZO01000094
80607
Bacteroidota
GTA
Tyr
>WENV180487182
OBZO01000033
338165
Bacteroidota
GGT
Thr
>WENV180487318
OBZO01000165
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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