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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180495500
OCAB01000029
235097
Bacteroidota
TTT
Lys
>WENV180495519
OCAB01000042
235097
Bacteroidota
TTT
Lys
>WENV180495480
OCAB01000018
235102
Bacteroidota
CGT
Thr
>WENV180495789
OCAB01013388
58715
Bacteroidota
GAG
Leu
>WENV180495739
OCAB01002378
338486
Bacteroidota
CAT
Met
>WENV180495452
OCAB01000005
48053
Bacteroidota
TGA
Ser
>WENV180495597
OCAB01000115
48053
Bacteroidota
TGA
Ser
>WENV180495629
OCAB01000149
415410
Bacteroidota
TTG
Gln
>WENV180495495
OCAB01000026
338124
Bacteroidota
CCG
Arg
>WENV180495531
OCAB01000049
338132
Bacteroidota
GCA
Cys
>WENV180495453
OCAB01000005
144656
Bacteroidota
GTG
His
>WENV180495460
OCAB01000006
235207
Bacteroidota
CAT
Met
>WENV180495661
OCAB01000202
80607
Bacteroidota
GTA
Tyr
>WENV180495447
OCAB01000004
80607
Bacteroidota
GTA
Tyr
>WENV180495580
OCAB01000080
113604
Bacteroidota
>WENV180495577
OCAB01000080
113604
Bacteroidota
>WENV180495741
OCAB01002534
80614
Bacteroidota
>WENV180495439
OCAB01000001
144590
Bacteroidota
GTT
Asn
>WENV180495438
OCAB01000001
144590
Bacteroidota
GTT
Asn
>WENV180495640
OCAB01000165
95559
Bacteroidota
TAG
Leu
>WENV180495601
OCAB01000120
419272
Bacteroidota
CTG
Gln
>WENV180495530
OCAB01000048
144655
Bacteroidota
GGC
Ala
>WENV180495790
OCAB01014036
338164
Bacteroidota
TTC
Glu
>WENV180495735
OCAB01002007
95875
Bacteroidota
TAG
Leu
>WENV180495442
OCAB01000001
44852
Bacteroidota
TAA
Leu
>WENV180495454
OCAB01000005
16224
Bacteroidota
GGA
Ser
>WENV180495575
OCAB01000078
16220
Bacteroidota
GGA
Ser
>WENV180495751
OCAB01003803
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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