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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180504704
OCAN01037361
148835
Gammaproteobacteria
CAT
Met
>WENV180504404
OCAN01002336
161963
Gammaproteobacteria
GAC
Val
>WENV180504643
OCAN01019368
339937
Gammaproteobacteria
CTG
Gln
>WENV180504686
OCAN01032465
237462
Gammaproteobacteria
GTG
His
>WENV180504644
OCAN01019368
412407
Gammaproteobacteria
CTG
Gln
>WENV180504591
OCAN01010387
342830
Gammaproteobacteria
>WENV180504592
OCAN01010537
3243
Gammaproteobacteria
>WENV180504617
OCAN01014123
176256
Gammaproteobacteria
GTC
Asp
>WENV180504570
OCAN01007972
176256
Gammaproteobacteria
GTC
Asp
>WENV180504544
OCAN01006507
176256
Gammaproteobacteria
GTC
Asp
>WENV180504535
OCAN01005948
176256
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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