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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180508228
OCAT01047979
345133
Verrucomicrobiota
GAC
Val
>WENV180508121
OCAT01027667
414625
Verrucomicrobiota
CCC
Gly
>WENV180508118
OCAT01027198
46246
Verrucomicrobiota
TGA
Ser
>WENV180508049
OCAT01019238
344841
Verrucomicrobiota
CAC
Val
>WENV180508301
OCAT01073551
344839
Verrucomicrobiota
GTG
His
>WENV180508264
OCAT01058310
7256
Verrucomicrobiota
GCT
Ser
>WENV180508029
OCAT01017572
345115
Verrucomicrobiota
CAT
Met
>WENV180508036
OCAT01018362
246709
Verrucomicrobiota
CAT
Met
>WENV180508201
OCAT01040514
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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