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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180540242
OCHQ01008014
82054
Verrucomicrobiota
GTA
Tyr
>WENV180540616
OCHQ01085223
246677
Verrucomicrobiota
CTT
Lys
>WENV180540678
OCHQ01111186
347038
Verrucomicrobiota
GCC
Gly
>WENV180540679
OCHQ01112846
246687
Verrucomicrobiota
CGC
Ala
>WENV180540375
OCHQ01030608
345110
Verrucomicrobiota
CCT
Arg
>WENV180540354
OCHQ01026789
82181
Verrucomicrobiota
AAG
Leu
>WENV180540773
OCHQ01188858
246728
Verrucomicrobiota
GAA
Phe
>WENV180540195
OCHQ01002299
345119
Verrucomicrobiota
TAC
Val
>WENV180540290
OCHQ01016446
17023
Verrucomicrobiota
GGA
Ser
>WENV180540252
OCHQ01010750
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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