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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180559731
OCKD01000077
158583
Actinomycetota
GTC
Asp
>WENV180559658
OCKD01000028
257209
Actinomycetota
CTC
Glu
>WENV180559610
OCKD01000011
291148
Actinomycetota
TGC
Ala
>WENV180559715
OCKD01000053
257224
Actinomycetota
CTT
Lys
>WENV180559711
OCKD01000050
257222
Actinomycetota
GGT
Thr
>WENV180559657
OCKD01000028
383365
Actinomycetota
CTG
Gln
>WENV180559799
OCKD01000152
257438
Actinomycetota
TAA
Leu
>WENV180559733
OCKD01000077
178959
Actinomycetota
TTT
Lys
>WENV180559732
OCKD01000077
181635
Actinomycetota
GAA
Phe
>WENV180559792
OCKD01000135
41178
Actinomycetota
GAG
Leu
>WENV180559712
OCKD01000050
368995
Actinomycetota
CAT
Met
>WENV180559798
OCKD01000152
133378
Actinomycetota
TTG
Gln
>WENV180559760
OCKD01000095
49711
Actinomycetota
CGA
Ser
>WENV180559710
OCKD01000050
124588
Actinomycetota
GTA
Tyr
>WENV180559656
OCKD01000028
158580
Actinomycetota
TAC
Val
>WENV180559759
OCKD01000095
282070
Actinomycetota
ACG
Arg
>WENV180559813
OCKD01000173
88642
Actinomycetota
CAG
Leu
>WENV180559665
OCKD01000031
257215
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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