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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
164 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180563269
OCLC01008420
257966
Bacillota
CCA
Trp
>WENV180563499
OCLC01049434
41450
Bacillota
TAA
Leu
>WENV180563447
OCLC01035411
258855
Bacillota
CTT
Lys
>WENV180563401
OCLC01024060
257969
Bacillota
TAC
Val
>WENV180563602
OCLC01129757
257969
Bacillota
TAC
Val
>WENV180562850
OCLC01000014
261392
Bacillota
GAA
Phe
>WENV180563140
OCLC01002628
261392
Bacillota
GAA
Phe
>WENV180563115
OCLC01001811
371877
Bacillota
CTG
Gln
>WENV180562937
OCLC01000085
387058
Bacillota
CCT
Arg
>WENV180563565
OCLC01092640
371352
Bacillota
CTC
Glu
>WENV180563198
OCLC01004207
159235
Bacillota
GTC
Asp
>WENV180563265
OCLC01008078
159235
Bacillota
GTC
Asp
>WENV180563270
OCLC01008420
159235
Bacillota
GTC
Asp
>WENV180563609
OCLC01131975
159235
Bacillota
GTC
Asp
>WENV180562818
OCLC01000002
261394
Bacillota
CCG
Arg
>WENV180563371
OCLC01019254
261391
Bacillota
GTT
Asn
>WENV180562976
OCLC01000177
162485
Bacillota
CAT
Met
>WENV180563590
OCLC01126810
26185
Bacillota
TAA
Leu
>WENV180562825
OCLC01000003
261452
Bacillota
GCC
Gly
>WENV180562843
OCLC01000009
261452
Bacillota
GCC
Gly
>WENV180562847
OCLC01000009
261452
Bacillota
GCC
Gly
>WENV180563390
OCLC01023246
272190
Bacillota
TGC
Ala
>WENV180563106
OCLC01001601
257968
Bacillota
GCC
Gly
>WENV180563230
OCLC01005876
257968
Bacillota
GCC
Gly
>WENV180563355
OCLC01017557
257968
Bacillota
GCC
Gly
>WENV180563400
OCLC01024060
257968
Bacillota
GCC
Gly
>WENV180563437
OCLC01032990
257968
Bacillota
GCC
Gly
>WENV180563594
OCLC01129313
257968
Bacillota
GCC
Gly
>WENV180562916
OCLC01000057
162480
Bacillota
ACG
Arg
>WENV180562918
OCLC01000058
162480
Bacillota
ACG
Arg
>WENV180563267
OCLC01008176
151240
Bacillota
TGG
Pro
>WENV180563213
OCLC01004826
88717
Bacillota
GTA
Tyr
>WENV180563225
OCLC01005484
88717
Bacillota
GTA
Tyr
>WENV180563237
OCLC01006112
88717
Bacillota
GTA
Tyr
>WENV180563607
OCLC01131644
88717
Bacillota
GTA
Tyr
>WENV180563419
OCLC01027660
488
Bacillota
>WENV180562977
OCLC01000177
369774
Bacillota
GGT
Thr
>WENV180563386
OCLC01021567
449081
Bacillota
GCA
Cys
>WENV180563105
OCLC01001601
257970
Bacillota
GAA
Phe
>WENV180563286
OCLC01010029
159454
Bacillota
GGG
Pro
>WENV180563260
OCLC01007448
257963
Bacillota
>WENV180563534
OCLC01071610
162458
Bacillota
CAT
Met
>WENV180562815
OCLC01000002
393129
Bacillota
CTC
Glu
>WENV180562848
OCLC01000010
393129
Bacillota
CTC
Glu
>WENV180562923
OCLC01000069
393129
Bacillota
CTC
Glu
>WENV180563264
OCLC01008078
319387
Bacillota
CCA
Trp
>WENV180563025
OCLC01000493
159242
Bacillota
CCG
Arg
>WENV180563127
OCLC01002322
159242
Bacillota
CCG
Arg
>WENV180563130
OCLC01002533
159242
Bacillota
CCG
Arg
>WENV180563273
OCLC01008768
159242
Bacillota
CCG
Arg
>WENV180563451
OCLC01035979
131004
Bacillota
TAG
Leu
>WENV180563374
OCLC01019719
258854
Bacillota
TGC
Ala
>WENV180563122
OCLC01002057
257972
Bacillota
CGG
Pro
>WENV180563283
OCLC01009640
257972
Bacillota
CGG
Pro
>WENV180563287
OCLC01010096
159318
Bacillota
CGG
Pro
>WENV180563274
OCLC01008850
64854
Bacillota
TAA
Leu
>WENV180563191
OCLC01003887
124618
Bacillota
GAG
Leu
>WENV180563206
OCLC01004580
124618
Bacillota
GAG
Leu
>WENV180563211
OCLC01004764
124618
Bacillota
GAG
Leu
>WENV180562914
OCLC01000056
449103
Bacillota
GCA
Cys
>WENV180563350
OCLC01016871
286917
Bacillota
TGC
Ala
>WENV180563063
OCLC01000823
448255
Bacillota
CTG
Gln
>WENV180563121
OCLC01002057
448255
Bacillota
CTG
Gln
>WENV180563187
OCLC01003777
448255
Bacillota
CTG
Gln
>WENV180563282
OCLC01009640
448255
Bacillota
CTG
Gln
>WENV180563050
OCLC01000601
159234
Bacillota
CAC
Val
>WENV180563194
OCLC01004025
159234
Bacillota
CAC
Val
>WENV180562829
OCLC01000004
269973
Bacillota
CCA
Trp
>WENV180563349
OCLC01016871
159433
Bacillota
GAT
Ile
>WENV180563320
OCLC01013974
162688
Bacillota
GAT
Ile
>WENV180563337
OCLC01015834
162688
Bacillota
GAT
Ile
>WENV180562866
OCLC01000024
162487
Bacillota
CGG
Pro
>WENV180563102
OCLC01001560
133221
Bacillota
CAA
Leu
>WENV180563443
OCLC01033648
106802
Bacillota
GTA
Tyr
>WENV180563571
OCLC01101373
159237
Bacillota
TCT
Arg
>WENV180563089
OCLC01001219
257977
Bacillota
CGT
Thr
>WENV180563440
OCLC01033325
374673
Bacillota
CTC
Glu
>WENV180563484
OCLC01043577
374673
Bacillota
CTC
Glu
>WENV180563474
OCLC01042611
258249
Bacillota
CGT
Thr
>WENV180562904
OCLC01000042
261284
Bacillota
CTT
Lys
>WENV180562967
OCLC01000160
261284
Bacillota
CTT
Lys
>WENV180562881
OCLC01000027
371263
Bacillota
TTG
Gln
>WENV180563328
OCLC01014392
261489
Bacillota
TGC
Ala
>WENV180563239
OCLC01006147
189541
Bacillota
GTC
Asp
>WENV180563581
OCLC01114336
105931
Bacillota
GTA
Tyr
>WENV180563051
OCLC01000604
158271
Bacillota
CCT
Arg
>WENV180563539
OCLC01073486
369393
Bacillota
TTC
Glu
>WENV180563067
OCLC01000895
293959
Bacillota
GGC
Ala
>WENV180563176
OCLC01003389
64857
Bacillota
TAA
Leu
>WENV180562853
OCLC01000014
41269
Bacillota
TGA
Ser
>WENV180562902
OCLC01000041
41269
Bacillota
TGA
Ser
>WENV180563251
OCLC01006265
56553
Bacillota
CAG
Leu
>WENV180562919
OCLC01000061
50190
Bacillota
AAG
Leu
>WENV180562941
OCLC01000102
50190
Bacillota
AAG
Leu
>WENV180563212
OCLC01004826
369390
Bacillota
TGT
Thr
>WENV180563236
OCLC01006112
369390
Bacillota
TGT
Thr
>WENV180563414
OCLC01026453
369390
Bacillota
TGT
Thr
>WENV180563460
OCLC01038030
371071
Bacillota
GCC
Gly
>WENV180563248
OCLC01006214
166292
Bacillota
GAT
Ile
>WENV180563272
OCLC01008621
11993
Bacillota
GGA
Ser
>WENV180563417
OCLC01026953
11993
Bacillota
GGA
Ser
>WENV180563505
OCLC01052006
370126
Bacillota
CTC
Glu
>WENV180562852
OCLC01000014
369776
Bacillota
CTG
Gln
>WENV180563278
OCLC01008901
64856
Bacillota
CAA
Leu
>WENV180563298
OCLC01011390
131055
Bacillota
TAG
Leu
>WENV180563097
OCLC01001392
159246
Bacillota
CGC
Ala
>WENV180563132
OCLC01002599
49796
Bacillota
TGA
Ser
>WENV180563146
OCLC01002704
49796
Bacillota
TGA
Ser
>WENV180563166
OCLC01003264
49796
Bacillota
TGA
Ser
>WENV180562816
OCLC01000002
261393
Bacillota
CGT
Thr
>WENV180563133
OCLC01002599
5393
Bacillota
GCT
Ser
>WENV180563147
OCLC01002704
5393
Bacillota
GCT
Ser
>WENV180563167
OCLC01003264
5393
Bacillota
GCT
Ser
>WENV180563007
OCLC01000349
67413
Bacillota
CAG
Leu
>WENV180563396
OCLC01023450
67413
Bacillota
CAG
Leu
>WENV180563305
OCLC01012463
58231
Bacillota
AAG
Leu
>WENV180563247
OCLC01006214
320672
Bacillota
TGC
Ala
>WENV180563059
OCLC01000771
448256
Bacillota
TTG
Gln
>WENV180563304
OCLC01011854
448256
Bacillota
TTG
Gln
>WENV180563399
OCLC01023928
448256
Bacillota
TTG
Gln
>WENV180562907
OCLC01000044
296620
Bacillota
GAA
Phe
>WENV180563532
OCLC01066931
50166
Bacillota
AAG
Leu
>WENV180563313
OCLC01013390
65533
Bacillota
CAG
Leu
>WENV180563544
OCLC01076502
283213
Bacillota
CTT
Lys
>WENV180562817
OCLC01000002
449102
Bacillota
CCA
Trp
>WENV180563023
OCLC01000477
18326
Bacillota
CGA
Ser
>WENV180563548
OCLC01079785
258102
Bacillota
TGC
Ala
>WENV180563410
OCLC01025918
131046
Bacillota
TAG
Leu
>WENV180563053
OCLC01000650
166295
Bacillota
GTT
Asn
>WENV180563135
OCLC01002628
162489
Bacillota
GTC
Asp
>WENV180563509
OCLC01054935
162489
Bacillota
GTC
Asp
>WENV180563567
OCLC01093913
93380
Bacillota
CAG
Leu
>WENV180563055
OCLC01000716
159236
Bacillota
GTT
Asn
>WENV180563079
OCLC01000971
159236
Bacillota
GTT
Asn
>WENV180563120
OCLC01002017
159236
Bacillota
GTT
Asn
>WENV180563178
OCLC01003440
159236
Bacillota
GTT
Asn
>WENV180563504
OCLC01051435
159236
Bacillota
GTT
Asn
>WENV180563445
OCLC01034520
257976
Bacillota
CCC
Gly
>WENV180563019
OCLC01000429
276063
Bacillota
CTC
Glu
>WENV180562876
OCLC01000027
162486
Bacillota
GAT
Ile
>WENV180563549
OCLC01079785
159345
Bacillota
GAT
Ile
>WENV180563442
OCLC01033648
258131
Bacillota
TGT
Thr
>WENV180562958
OCLC01000143
89161
Bacillota
CAA
Leu
>WENV180563231
OCLC01005876
369392
Bacillota
GCA
Cys
>WENV180563297
OCLC01011190
369392
Bacillota
GCA
Cys
>WENV180562903
OCLC01000041
390939
Bacillota
CTG
Gln
>WENV180563479
OCLC01042920
112135
Bacillota
GTA
Tyr
>WENV180563094
OCLC01001314
257965
Bacillota
TGG
Pro
>WENV180563124
OCLC01002112
257965
Bacillota
TGG
Pro
>WENV180563368
OCLC01018999
257965
Bacillota
TGG
Pro
>WENV180563110
OCLC01001716
64855
Bacillota
CAG
Leu
>WENV180563259
OCLC01007435
64855
Bacillota
CAG
Leu
>WENV180563498
OCLC01046672
64855
Bacillota
CAG
Leu
>WENV180563605
OCLC01131088
64855
Bacillota
CAG
Leu
>WENV180562879
OCLC01000027
162488
Bacillota
TCT
Arg
>WENV180562828
OCLC01000004
105955
Bacillota
TAG
Leu
>WENV180563574
OCLC01105048
65531
Bacillota
CAG
Leu
>WENV180563595
OCLC01129342
159816
Bacillota
CAT
Met
>WENV180563310
OCLC01013114
369391
Bacillota
TCC
Gly
>WENV180563156
OCLC01003051
414080
Bacillota
TTG
Gln
>WENV180562823
OCLC01000003
222762
Bacillota
GTC
Asp
>WENV180562841
OCLC01000009
222762
Bacillota
GTC
Asp
>WENV180562845
OCLC01000009
222762
Bacillota
GTC
Asp
>WENV180562883
OCLC01000027
131078
Bacillota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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