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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180566278
OCLI01000002
270475
Bacillota
GAA
Phe
>WENV180566423
OCLI01018951
254421
Bacillota
TAC
Val
>WENV180566393
OCLI01002782
239876
Bacillota
CCT
Arg
>WENV180566402
OCLI01005537
145056
Bacillota
ACG
Arg
>WENV180566421
OCLI01013962
243332
Bacillota
CTT
Lys
>WENV180566424
OCLI01020054
338395
Bacillota
>WENV180566390
OCLI01002004
338391
Bacillota
TTG
Gln
>WENV180566383
OCLI01001866
264264
Bacillota
TGC
Ala
>WENV180566395
OCLI01003265
10771
Bacillota
GGA
Ser
>WENV180566407
OCLI01006765
235622
Bacillota
CGT
Thr
>WENV180566285
OCLI01000002
150517
Bacillota
CAT
Met
>WENV180566259
OCLI01000001
359258
Bacillota
TTG
Gln
>WENV180566254
OCLI01000001
359258
Bacillota
TTG
Gln
>WENV180566415
OCLI01009248
235621
Bacillota
GTT
Asn
>WENV180566401
OCLI01005537
58783
Bacillota
TAA
Leu
>WENV180566389
OCLI01002004
80642
Bacillota
GTA
Tyr
>WENV180566422
OCLI01018811
175660
Bacillota
GTC
Asp
>WENV180566404
OCLI01005537
146741
Bacillota
CAT
Met
>WENV180566409
OCLI01007990
338393
Bacillota
TTC
Glu
>WENV180566267
OCLI01000002
174818
Bacillota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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