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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180570517
OCLS01000192
359124
Gammaproteobacteria
TTG
Gln
>WENV180571021
OCLS01001560
359124
Gammaproteobacteria
TTG
Gln
>WENV180571077
OCLS01003682
359124
Gammaproteobacteria
TTG
Gln
>WENV180570332
OCLS01000046
235516
Gammaproteobacteria
GTG
His
>WENV180570567
OCLS01000255
195519
Gammaproteobacteria
CAT
Met
>WENV180570222
OCLS01000013
16242
Gammaproteobacteria
GCT
Ser
>WENV180570258
OCLS01000023
144863
Gammaproteobacteria
CAT
Met
>WENV180570166
OCLS01000004
145522
Gammaproteobacteria
CCG
Arg
>WENV180570203
OCLS01000009
80625
Gammaproteobacteria
TAA
Leu
>WENV180570202
OCLS01000009
80625
Gammaproteobacteria
TAA
Leu
>WENV180570164
OCLS01000004
95603
Gammaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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