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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180593200
OCOX01006362
165001
Bacteroidota
GTT
Asn
>WENV180593184
OCOX01004839
306609
Bacteroidota
GAA
Phe
>WENV180593612
OCOX01104214
60261
Bacteroidota
TAA
Leu
>WENV180593090
OCOX01000604
364423
Bacteroidota
GGT
Thr
>WENV180593387
OCOX01032177
414401
Bacteroidota
GCA
Cys
>WENV180593239
OCOX01010389
151405
Bacteroidota
TGC
Ala
>WENV180593309
OCOX01019808
60695
Bacteroidota
GCT
Ser
>WENV180593675
OCOX01135944
17987
Bacteroidota
GGA
Ser
>WENV180593088
OCOX01000604
113694
Bacteroidota
GTA
Tyr
>WENV180593280
OCOX01015306
185921
Bacteroidota
GTC
Asp
>WENV180593611
OCOX01104214
342807
Bacteroidota
GCC
Gly
>WENV180593558
OCOX01077382
101289
Bacteroidota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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