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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180593537
OCOX01070254
183605
Gammaproteobacteria
CCG
Arg
>WENV180593162
OCOX01003310
306171
Gammaproteobacteria
TGC
Ala
>WENV180593261
OCOX01012986
46594
Gammaproteobacteria
GGA
Ser
>WENV180593461
OCOX01047338
147647
Gammaproteobacteria
CAT
Met
>WENV180593298
OCOX01018330
245602
Gammaproteobacteria
TTT
Lys
>WENV180593378
OCOX01031440
148148
Gammaproteobacteria
GAC
Val
>WENV180593497
OCOX01055094
241230
Gammaproteobacteria
GAA
Phe
>WENV180593192
OCOX01005229
247974
Gammaproteobacteria
CCA
Trp
>WENV180593783
OCOX01202147
147118
Gammaproteobacteria
GAC
Val
>WENV180593246
OCOX01010963
250885
Gammaproteobacteria
TGC
Ala
>WENV180593676
OCOX01136990
196013
Gammaproteobacteria
GAT
Ile
>WENV180593249
OCOX01011815
247088
Gammaproteobacteria
CCA
Trp
>WENV180593677
OCOX01136990
301352
Gammaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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