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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180907064
ODPX01000063
49711
Actinomycetota
CGA
Ser
>WENV180907067
ODPX01000219
257215
Actinomycetota
CGT
Thr
>WENV180907068
ODPX01000316
158583
Actinomycetota
GTC
Asp
>WENV180907069
ODPX01000316
158584
Actinomycetota
GAA
Phe
>WENV180907078
ODPX01000587
158586
Actinomycetota
TTT
Lys
>WENV180907085
ODPX01001199
105088
Actinomycetota
GTA
Tyr
>WENV180907086
ODPX01001199
257222
Actinomycetota
GGT
Thr
>WENV180907087
ODPX01001199
368995
Actinomycetota
CAT
Met
>WENV180907091
ODPX01001403
368991
Actinomycetota
CTG
Gln
>WENV180907092
ODPX01001403
257209
Actinomycetota
CTC
Glu
>WENV180907093
ODPX01001408
88642
Actinomycetota
CAG
Leu
>WENV180907095
ODPX01001582
158580
Actinomycetota
TAC
Val
>WENV180907097
ODPX01001721
257214
Actinomycetota
TGC
Ala
>WENV180907101
ODPX01002487
50989
Actinomycetota
TGA
Ser
>WENV180907103
ODPX01002634
282070
Actinomycetota
ACG
Arg
>WENV180907104
ODPX01002917
257224
Actinomycetota
CTT
Lys
>WENV180907117
ODPX01009597
160677
Actinomycetota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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