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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180909525
ODQM01000316
158583
Actinomycetota
GTC
Asp
>WENV180909549
ODQM01001403
257209
Actinomycetota
CTC
Glu
>WENV180909535
ODQM01000587
158586
Actinomycetota
TTT
Lys
>WENV180909561
ODQM01002917
257224
Actinomycetota
CTT
Lys
>WENV180909543
ODQM01001199
257222
Actinomycetota
GGT
Thr
>WENV180909558
ODQM01002487
50989
Actinomycetota
TGA
Ser
>WENV180909548
ODQM01001403
368991
Actinomycetota
CTG
Gln
>WENV180909526
ODQM01000316
158584
Actinomycetota
GAA
Phe
>WENV180909554
ODQM01001721
257214
Actinomycetota
TGC
Ala
>WENV180909544
ODQM01001199
368995
Actinomycetota
CAT
Met
>WENV180909542
ODQM01001199
105088
Actinomycetota
GTA
Tyr
>WENV180909521
ODQM01000063
49711
Actinomycetota
CGA
Ser
>WENV180909552
ODQM01001582
158580
Actinomycetota
TAC
Val
>WENV180909560
ODQM01002634
282070
Actinomycetota
ACG
Arg
>WENV180909550
ODQM01001408
88642
Actinomycetota
CAG
Leu
>WENV180909524
ODQM01000219
257215
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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