This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1016464
SRR023846.511820
159380
Actinomycetota
GAT
Ile
>SRA1015395
SRR023846.42063
259479
Actinomycetota
ACG
Arg
>SRA1015834
SRR023846.218497
259479
Actinomycetota
ACG
Arg
>SRA1014413
SRR023845.127366
407382
Actinomycetota
CAC
Val
>SRA1015195
SRR023845.495916
407382
Actinomycetota
CAC
Val
>SRA1015320
SRR023846.15388
407382
Actinomycetota
CAC
Val
>SRA1016342
SRR023846.459416
258147
Actinomycetota
GTG
His
>SRA1014953
SRR023845.395622
166851
Actinomycetota
>SRA1016337
SRR023846.457634
166851
Actinomycetota
>SRA1015909
SRR023846.254414
161361
Actinomycetota
CGG
Pro
>SRA1015990
SRR023846.295660
161361
Actinomycetota
CGG
Pro
>SRA1016118
SRR023846.354320
161361
Actinomycetota
CGG
Pro
>SRA1016552
SRR023846.560909
161361
Actinomycetota
CGG
Pro
>SRA1014595
SRR023845.216358
313010
Actinomycetota
CTT
Lys
>SRA1015421
SRR023846.51608
313010
Actinomycetota
CTT
Lys
>SRA1016045
SRR023846.322849
313010
Actinomycetota
CTT
Lys
>SRA1016500
SRR023846.533581
313010
Actinomycetota
CTT
Lys
>SRA1015938
SRR023846.274176
160677
Actinomycetota
>SRA1016525
SRR023846.543526
258112
Actinomycetota
CCG
Arg
>SRA1015811
SRR023846.208315
270152
Actinomycetota
GTG
His
>SRA1016456
SRR023846.507340
270152
Actinomycetota
GTG
His
>SRA1014223
SRR023845.44619
158778
Actinomycetota
GTC
Asp
>SRA1014348
SRR023845.98686
158778
Actinomycetota
GTC
Asp
>SRA1014770
SRR023845.307508
158778
Actinomycetota
GTC
Asp
>SRA1014987
SRR023845.412025
53796
Actinomycetota
GAG
Leu
>SRA1014651
SRR023845.241331
278268
Actinomycetota
CTC
Glu
>SRA1014667
SRR023845.251124
262385
Actinomycetota
TTT
Lys
>SRA1014746
SRR023845.297246
448302
Actinomycetota
CCC
Gly
>SRA1014399
SRR023845.120783
260290
Actinomycetota
TTT
Lys
>SRA1014827
SRR023845.332730
268525
Actinomycetota
CTT
Lys
>SRA1015022
SRR023845.424983
258113
Actinomycetota
CTT
Lys
>SRA1014765
SRR023845.304271
257001
Actinomycetota
TAC
Val
>SRA1014378
SRR023845.113966
105048
Actinomycetota
TAG
Leu
>SRA1015021
SRR023845.424782
448107
Actinomycetota
CCC
Gly
>SRA1015000
SRR023845.418172
201621
Actinomycetota
TAA
Leu
>SRA1015140
SRR023845.475668
169968
Actinomycetota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK