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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1014665
SRR023845.250515
51479
Betaproteobacteria
TGA
Ser
>SRA1016263
SRR023846.427371
51479
Betaproteobacteria
TGA
Ser
>SRA1014582
SRR023845.210504
158784
Betaproteobacteria
>SRA1015034
SRR023845.428102
50768
Betaproteobacteria
TGA
Ser
>SRA1014441
SRR023845.144039
306898
Betaproteobacteria
GTT
Asn
>SRA1015268
SRR023845.531398
266641
Betaproteobacteria
CGC
Ala
>SRA1014128
SRR023845.10586
290367
Betaproteobacteria
TTC
Glu
>SRA1014510
SRR023845.173326
162147
Betaproteobacteria
>SRA1014904
SRR023845.375078
162147
Betaproteobacteria
>SRA1014820
SRR023845.326775
50797
Betaproteobacteria
CGA
Ser
>SRA1016032
SRR023846.317459
106935
Betaproteobacteria
GAG
Leu
>SRA1016495
SRR023846.530639
106935
Betaproteobacteria
GAG
Leu
>SRA1014225
SRR023845.45359
106935
Betaproteobacteria
GAG
Leu
>SRA1015689
SRR023846.158871
26431
Betaproteobacteria
TGA
Ser
>SRA1016108
SRR023846.350915
26431
Betaproteobacteria
TGA
Ser
>SRA1016037
SRR023846.319598
407057
Betaproteobacteria
TGC
Ala
>SRA1016494
SRR023846.529544
22269
Betaproteobacteria
GGA
Ser
>SRA1015363
SRR023846.30547
474654
Betaproteobacteria
GCA
Cys
>SRA1015788
SRR023846.200981
218425
Betaproteobacteria
TGG
Pro
>SRA1016479
SRR023846.522768
218425
Betaproteobacteria
TGG
Pro
>SRA1016109
SRR023846.351260
115137
Betaproteobacteria
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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