This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1014217
SRR023845.43259
159341
Gammaproteobacteria
GAT
Ile
>SRA1015987
SRR023846.294980
159341
Gammaproteobacteria
GAT
Ile
>SRA1015010
SRR023845.421798
66953
Gammaproteobacteria
CAG
Leu
>SRA1015256
SRR023845.522697
66953
Gammaproteobacteria
CAG
Leu
>SRA1015204
SRR023845.498016
51272
Gammaproteobacteria
TGA
Ser
>SRA1014567
SRR023845.203139
368889
Gammaproteobacteria
>SRA1014452
SRR023845.146929
407385
Gammaproteobacteria
CCT
Arg
>SRA1014690
SRR023845.264894
407385
Gammaproteobacteria
CCT
Arg
>SRA1014899
SRR023845.370052
64679
Gammaproteobacteria
CAG
Leu
>SRA1014828
SRR023845.332947
465569
Gammaproteobacteria
CTG
Gln
>SRA1015916
SRR023846.260232
169397
Gammaproteobacteria
CGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK