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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181203955
OERX01010365
199329
Bacillota
GAT
Ile
>WENV181203801
OERX01000136
309920
Bacillota
GCC
Gly
>WENV181203931
OERX01008254
350767
Bacillota
GAA
Phe
>WENV181203905
OERX01004929
200088
Bacillota
GAT
Ile
>WENV181204029
OERX01022186
310774
Bacillota
TAC
Val
>WENV181203811
OERX01000425
526647
Bacillota
CTG
Gln
>WENV181204011
OERX01016226
156061
Bacillota
TAG
Leu
>WENV181203910
OERX01006036
318486
Bacillota
TGC
Ala
>WENV181203820
OERX01000598
197113
Bacillota
TCT
Arg
>WENV181203837
OERX01000953
195429
Bacillota
GTT
Asn
>WENV181203798
OERX01000131
195430
Bacillota
TCT
Arg
>WENV181204022
OERX01020529
527584
Bacillota
GCA
Cys
>WENV181203843
OERX01001155
52608
Bacillota
TAA
Leu
>WENV181203930
OERX01008254
225943
Bacillota
>WENV181203904
OERX01004929
344326
Bacillota
TGC
Ala
>WENV181203963
OERX01011607
251662
Bacillota
GTC
Asp
>WENV181203900
OERX01004659
10135
Bacillota
GGA
Ser
>WENV181203802
OERX01000153
81363
Bacillota
TAA
Leu
>WENV181203983
OERX01012904
196152
Bacillota
GAT
Ile
>WENV181203880
OERX01003100
323270
Bacillota
CGC
Ala
>WENV181203895
OERX01004374
321561
Bacillota
GGC
Ala
>WENV181203996
OERX01013816
325916
Bacillota
TGC
Ala
>WENV181203796
OERX01000083
309917
Bacillota
TGG
Pro
>WENV181203934
OERX01008531
526740
Bacillota
CCA
Trp
>WENV181203911
OERX01006036
203285
Bacillota
GAT
Ile
>WENV181203939
OERX01008682
195555
Bacillota
GAT
Ile
>WENV181203861
OERX01001991
379828
Bacillota
CCA
Trp
>WENV181203842
OERX01001069
195427
Bacillota
CAC
Val
>WENV181203805
OERX01000161
438691
Bacillota
TGT
Thr
>WENV181203979
OERX01012603
309929
Bacillota
CGT
Thr
>WENV181203957
OERX01010545
323546
Bacillota
TGC
Ala
>WENV181204005
OERX01015712
310805
Bacillota
GGT
Thr
>WENV181203867
OERX01002325
310223
Bacillota
CCG
Arg
>WENV181203975
OERX01012143
134172
Bacillota
GTA
Tyr
>WENV181204021
OERX01020529
438734
Bacillota
TTC
Glu
>WENV181203853
OERX01001581
81364
Bacillota
CAG
Leu
>WENV181203994
OERX01013799
195554
Bacillota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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