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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
7 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1042969
SRR035092.9957
62694
Actinomycetota
GGA
Ser
>SRA1043830
SRR035092.181569
312281
Actinomycetota
TGC
Ala
>SRA1043864
SRR035092.187694
62645
Actinomycetota
GGA
Ser
>SRA1044430
SRR035092.278795
317635
Actinomycetota
TGC
Ala
>SRA1044821
SRR035092.352014
317635
Actinomycetota
TGC
Ala
>SRA1044826
SRR035092.353139
81194
Actinomycetota
GAG
Leu
>SRA1045082
SRR035092.407165
439915
Actinomycetota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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