tRNADB-CE: Statistics to Identical Sequence Groups

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tRNADB-CE

: tRNA gene database curated manually by experts

Takashi Abe¹, Toshimichi Ikemura², Junichi Sugahara³, Akio Kanai³, Yasuo Ohara², Hiroshi Uehara², Makoto Kinouchi⁴,

Shigehiko Kanaya⁵, Yuko Yamada², Akira Muto⁶, Hachiro Inokuchi²

¹. Niigata Univ., ². Nagahama Inst. of Bio-Sci. and Tech., ³. Keio Univ., ⁴. Yamagata Univ., ⁵. NAIST, ⁶. Hirosaki Univ.

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The tRNA list of Cluster_58084.

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Cluster ID	Phylum/Class	Species	Amino Acid	Anticodon
C007846	Gammaproteobacteria	Dichelobacter nodosus VCS1703A	Gly	GCC
C009601	Gammaproteobacteria	Francisella tularensis subsp. tularensis FSC 198	Gly	GCC
C009610	Gammaproteobacteria	Francisella tularensis subsp. tularensis FSC 198	Gly	GCC
C009658	Gammaproteobacteria	Francisella tularensis subsp. holarctica LVS	Gly	GCC
C009695	Gammaproteobacteria	Francisella tularensis subsp. holarctica OSU18 (CP000437)	Gly	GCC
C009713	Gammaproteobacteria	Francisella tularensis subsp. tularensis SCHU S4	Gly	GCC
C009722	Gammaproteobacteria	Francisella tularensis subsp. tularensis SCHU S4	Gly	GCC
C009746	Gammaproteobacteria	Francisella tularensis subsp. novicida U112	Gly	GCC
C009759	Gammaproteobacteria	Francisella tularensis subsp. novicida U112	Gly	GCC
C009781	Gammaproteobacteria	Francisella tularensis subsp. tularensis WY96-3418	Gly	GCC
C009804	Gammaproteobacteria	Francisella tularensis subsp. tularensis WY96-3418	Gly	GCC
C013026	Gammaproteobacteria	Marinomonas sp. MWYL1	Gly	GCC
C013049	Gammaproteobacteria	Marinomonas sp. MWYL1	Gly	GCC
C013051	Gammaproteobacteria	Marinomonas sp. MWYL1	Gly	GCC
C013053	Gammaproteobacteria	Marinomonas sp. MWYL1	Gly	GCC
C013055	Gammaproteobacteria	Marinomonas sp. MWYL1	Gly	GCC
C013058	Gammaproteobacteria	Marinomonas sp. MWYL1	Gly	GCC
C015151	Betaproteobacteria	Nitrosospira multiformis ATCC 25196	Gly	GCC
C020873	Gammaproteobacteria	Saccharophagus degradans 2-40	Gly	GCC
C022085	Gammaproteobacteria	Sodalis glossinidius str. 'morsitans'	Gly	GCC
C022086	Gammaproteobacteria	Sodalis glossinidius str. 'morsitans'	Gly	GCC
C022087	Gammaproteobacteria	Sodalis glossinidius str. 'morsitans'	Gly	GCC
C08000402	Gammaproteobacteria	Acidithiobacillus ferrooxidans ATCC 53993	Gly	GCC
C08005025	Gammaproteobacteria	Francisella philomiragia subsp. philomiragia ATCC 25017	Gly	GCC
C08005040	Gammaproteobacteria	Francisella philomiragia subsp. philomiragia ATCC 25017	Gly	GCC
C08005109	Gammaproteobacteria	Francisella tularensis subsp. mediasiatica FSC147	Gly	GCC
C08005132	Gammaproteobacteria	Francisella tularensis subsp. mediasiatica FSC147	Gly	GCC
C08005171	Gammaproteobacteria	Francisella tularensis subsp. holarctica FTNF002-00	Gly	GCC
C09100355	Gammaproteobacteria	Acidithiobacillus ferrooxidans ATCC 23270	Gly	GCC
C10106987	Gammaproteobacteria	Francisella tularensis subsp. tularensis NE061598	Gly	GCC
C10107001	Gammaproteobacteria	Francisella tularensis subsp. tularensis NE061598	Gly	GCC
C10107044	Gammaproteobacteria	Francisella tularensis subsp. holarctica OSU18 (BK006741)	Gly	GCC
C11100511	Gammaproteobacteria	Acidithiobacillus caldus SM-1	Gly	GCC
C11100722	Gammaproteobacteria	Acidithiobacillus ferrivorans SS3	Gly	GCC
C11109162	Gammaproteobacteria	Francisella cf. novicida 3523	Gly	GCC
C11109175	Gammaproteobacteria	Francisella cf. novicida 3523	Gly	GCC
C11109243	Gammaproteobacteria	Francisella cf. novicida Fx1	Gly	GCC
C11109256	Gammaproteobacteria	Francisella cf. novicida Fx1	Gly	GCC
C11109283	Gammaproteobacteria	Francisella sp. TX077308	Gly	GCC
C11109305	Gammaproteobacteria	Francisella sp. TX077308	Gly	GCC
C11114683	Gammaproteobacteria	Marinomonas mediterranea MMB-1	Gly	GCC
C11114686	Gammaproteobacteria	Marinomonas mediterranea MMB-1	Gly	GCC
C11114698	Gammaproteobacteria	Marinomonas mediterranea MMB-1	Gly	GCC
C11114700	Gammaproteobacteria	Marinomonas mediterranea MMB-1	Gly	GCC
C11114995	Gammaproteobacteria	Marinomonas posidonica IVIA-Po-181	Gly	GCC
C11115015	Gammaproteobacteria	Marinomonas posidonica IVIA-Po-181	Gly	GCC
C11115017	Gammaproteobacteria	Marinomonas posidonica IVIA-Po-181	Gly	GCC
C11115019	Gammaproteobacteria	Marinomonas posidonica IVIA-Po-181	Gly	GCC
C11115021	Gammaproteobacteria	Marinomonas posidonica IVIA-Po-181	Gly	GCC
C11115024	Gammaproteobacteria	Marinomonas posidonica IVIA-Po-181	Gly	GCC
C11115644	Betaproteobacteria	Nitrosomonas sp. AL212	Gly	GCC
C11115684	Betaproteobacteria	Nitrosomonas sp. Is79A3	Gly	GCC
C121004624	Gammaproteobacteria	Francisella tularensis subsp. tularensis TIGB03	Gly	GCC
C121004633	Gammaproteobacteria	Francisella tularensis subsp. tularensis TIGB03	Gly	GCC
C121004662	Gammaproteobacteria	Francisella tularensis subsp. tularensis TI0902	Gly	GCC
C121004671	Gammaproteobacteria	Francisella tularensis subsp. tularensis TI0902	Gly	GCC
C121007003	Gammaproteobacteria	Thiocystis violascens DSM 198	Gly	GCC
C121012426	Gammaproteobacteria	Francisella noatunensis subsp. orientalis str. Toba 04	Gly	GCC
C121012444	Gammaproteobacteria	Francisella noatunensis subsp. orientalis str. Toba 04	Gly	GCC
C121014450	Gammaproteobacteria	secondary endosymbiont of Ctenarytaina eucalypti	Gly	GCC
C131008444	Gammaproteobacteria	Francisella tularensis subsp. holarctica FSC200	Gly	GCC
C131010026	Gammaproteobacteria	Francisella tularensis subsp. holarctica F92	Gly	GCC
C141001574	Gammaproteobacteria	secondary endosymbiont of Heteropsylla cubana	Gly	GCC
C141010045	Gammaproteobacteria	Francisella noatunensis subsp. orientalis LADL--07-285A	Gly	GCC
C141010054	Gammaproteobacteria	Francisella noatunensis subsp. orientalis LADL--07-285A	Gly	GCC
C151007968	Gammaproteobacteria	Acidithiobacillus caldus ATCC 51756	Gly	GCC
C151009220	Gammaproteobacteria	Candidatus Sodalis pierantonius str. SOPE	Gly	GCC
C151009276	Gammaproteobacteria	Sodalis praecaptivus HS1	Gly	GCC
C151009277	Gammaproteobacteria	Sodalis praecaptivus HS1	Gly	GCC
C151009278	Gammaproteobacteria	Sodalis praecaptivus HS1	Gly	GCC
C151009294	Gammaproteobacteria	Sodalis praecaptivus HS1	Gly	GCC
C151017490	Gammaproteobacteria	Francisella tularensis subsp. holarctica PHIT-FT049	Gly	GCC
C151049521	Gammaproteobacteria	Francisella philomiragia O#319-029	Gly	GCC
C151049534	Gammaproteobacteria	Francisella philomiragia O#319-029	Gly	GCC
C151049676	Gammaproteobacteria	Francisella tularensis subsp. novicida F6168	Gly	GCC
C151049691	Gammaproteobacteria	Francisella tularensis subsp. novicida F6168	Gly	GCC
C151050958	Gammaproteobacteria	Francisella philomiragia O#319-067	Gly	GCC
C151050973	Gammaproteobacteria	Francisella philomiragia O#319-067	Gly	GCC
C151051073	Gammaproteobacteria	Francisella philomiragia GA01-2794	Gly	GCC
C151051086	Gammaproteobacteria	Francisella philomiragia GA01-2794	Gly	GCC
C151051105	Gammaproteobacteria	Francisella philomiragia O#319-036 [FSC 153]	Gly	GCC
C151051126	Gammaproteobacteria	Francisella philomiragia O#319-036 [FSC 153]	Gly	GCC
C151051145	Gammaproteobacteria	Francisella philomiragia GA01-2801	Gly	GCC
C151051167	Gammaproteobacteria	Francisella philomiragia GA01-2801	Gly	GCC
C151054385	Gammaproteobacteria	Francisella sp. FSC1006	Gly	GCC
C151054395	Gammaproteobacteria	Francisella sp. FSC1006	Gly	GCC
C151055371	Gammaproteobacteria	Francisella tularensis subsp. novicida D9876	Gly	GCC
C151055384	Gammaproteobacteria	Francisella tularensis subsp. novicida D9876	Gly	GCC
C151056308	Gammaproteobacteria	Francisella tularensis subsp. novicida U112 (CP009633)	Gly	GCC
C151056332	Gammaproteobacteria	Francisella tularensis subsp. novicida U112 (CP009633)	Gly	GCC
C151057394	Gammaproteobacteria	Francisella tularensis subsp. holarctica FTT_1	Gly	GCC
C151057449	Gammaproteobacteria	Francisella tularensis subsp. holarctica LVS (CP009694)	Gly	GCC
C151058741	Gammaproteobacteria	Francisella tularensis subsp. tularensis WY-00W4114	Gly	GCC
C151058764	Gammaproteobacteria	Francisella tularensis subsp. tularensis WY-00W4114	Gly	GCC
C151063454	Gammaproteobacteria	Francisella philomiragia subsp. philomiragia ATCC 25015 O#319L	Gly	GCC
C151063478	Gammaproteobacteria	Francisella philomiragia subsp. philomiragia ATCC 25015 O#319L	Gly	GCC
C151064555	Gammaproteobacteria	Francisella tularensis subsp. tularensis WY96	Gly	GCC
C151064580	Gammaproteobacteria	Francisella tularensis subsp. tularensis WY96	Gly	GCC
C151064808	Gammaproteobacteria	Francisella tularensis subsp. tularensis NIH B-38	Gly	GCC
C151064822	Gammaproteobacteria	Francisella tularensis subsp. tularensis NIH B-38	Gly	GCC
C151065688	Gammaproteobacteria	Francisella tularensis subsp. holarctica VT68	Gly	GCC
C151065733	Gammaproteobacteria	Francisella tularensis subsp. holarctica 425	Gly	GCC
C151065741	Gammaproteobacteria	Francisella tularensis subsp. tularensis SCHU S4 SHU-S4	Gly	GCC
C151065760	Gammaproteobacteria	Francisella tularensis subsp. tularensis SCHU S4 SHU-S4	Gly	GCC
C151068575	Gammaproteobacteria	Francisella guangzhouensis 08HL01032	Gly	GCC
C151068596	Gammaproteobacteria	Francisella guangzhouensis 08HL01032	Gly	GCC
C151069716	Gammaproteobacteria	Francisella tularensis subsp. tularensis str. SCHU S4 substr.	Gly	GCC
C151069725	Gammaproteobacteria	Francisella tularensis subsp. tularensis str. SCHU S4 substr.	Gly	GCC
C151082862	Betaproteobacteria	Nitrosomonas communis Nm2	Gly	GCC
C151087374	Gammaproteobacteria	Francisella noatunensis subsp. orientalis FNO12	Gly	GCC
C151087387	Gammaproteobacteria	Francisella noatunensis subsp. orientalis FNO12	Gly	GCC
C151087411	Gammaproteobacteria	Francisella noatunensis subsp. orientalis FNO24	Gly	GCC
C151087423	Gammaproteobacteria	Francisella noatunensis subsp. orientalis FNO24	Gly	GCC
C151087447	Gammaproteobacteria	Francisella noatunensis subsp. orientalis FNO190	Gly	GCC
C151087459	Gammaproteobacteria	Francisella noatunensis subsp. orientalis FNO190	Gly	GCC
C151089968	Gammaproteobacteria	Francisella tularensis subsp. novicida DPG 3A-IS	Gly	GCC
C151089984	Gammaproteobacteria	Francisella tularensis subsp. novicida DPG 3A-IS	Gly	GCC
C151091883	Gammaproteobacteria	Francisella noatunensis subsp. orientalis FNO01	Gly	GCC
C151091895	Gammaproteobacteria	Francisella noatunensis subsp. orientalis FNO01	Gly	GCC
C151094437	Betaproteobacteria	Nitrosospira briensis C-128	Gly	GCC
C151094497	Gammaproteobacteria	Francisella tularensis subsp. tularensis MA00-2987	Gly	GCC
C151094506	Gammaproteobacteria	Francisella tularensis subsp. tularensis MA00-2987	Gly	GCC
C161024567	Gammaproteobacteria	Francisella tularensis subsp. tularensis Scherm	Gly	GCC
C161024580	Gammaproteobacteria	Francisella tularensis subsp. tularensis Scherm	Gly	GCC
C161036240	Gammaproteobacteria	Francisella tularensis subsp. holarctica OR96-0246	Gly	GCC
C161039275	Gammaproteobacteria	Francisella tularensis T01	Gly	GCC
C161042433	Gammaproteobacteria	Francisella persica ATCC VR-331 FSC845	Gly	GCC
C161042462	Gammaproteobacteria	Francisella persica ATCC VR-331 FSC845	Gly	GCC
C161049712	Gammaproteobacteria	Francisella persica ATCC VR-331	Gly	GCC
C161049724	Gammaproteobacteria	Francisella persica ATCC VR-331	Gly	GCC
C161055574	Betaproteobacteria	Nitrosomonas ureae Nm10	Gly	GCC
C161108583	Gammaproteobacteria	Enterobacteriaceae bacterium symbiont of Paracoccus marginatus	Gly	GCC
C161108634	Gammaproteobacteria	Enterobacteriaceae bacterium symbiont of Ferrisia virgata	Gly	GCC
C171002447	Gammaproteobacteria	Francisella tularensis subsp. novicida AL97-2214 (CP009653)	Gly	GCC
C171002460	Gammaproteobacteria	Francisella tularensis subsp. novicida AL97-2214 (CP009653)	Gly	GCC
C171002486	Gammaproteobacteria	Francisella sp. CA97-1460 (CP009654)	Gly	GCC
C171002531	Gammaproteobacteria	Francisella tularensis subsp. novicida AZ06-7470 (CP009682)	Gly	GCC
C171002544	Gammaproteobacteria	Francisella tularensis subsp. novicida AZ06-7470 (CP009682)	Gly	GCC
C171050430	Gammaproteobacteria	Francisella tularensis subsp. novicida PA10-7858 (CP016635)	Gly	GCC
C171050443	Gammaproteobacteria	Francisella tularensis subsp. novicida PA10-7858 (CP016635)	Gly	GCC
C171051163	Gammaproteobacteria	Francisella sp. TX077310 (CP016796)	Gly	GCC
C171051177	Gammaproteobacteria	Francisella sp. TX077310 (CP016796)	Gly	GCC
C171053699	Gammaproteobacteria	Francisella sp. MA067296 (CP016930)	Gly	GCC
C171053733	Gammaproteobacteria	Francisella sp. MA067296 (CP016930)	Gly	GCC
C171058030	Gammaproteobacteria	Francisella tularensis subsp. tularensis NR-21734 (CP017153)	Gly	GCC
C171058039	Gammaproteobacteria	Francisella tularensis subsp. tularensis NR-21734 (CP017153)	Gly	GCC
C171058068	Gammaproteobacteria	Francisella tularensis subsp. tularensis NR-21736 (CP017154)	Gly	GCC
C171058077	Gammaproteobacteria	Francisella tularensis subsp. tularensis NR-21736 (CP017154)	Gly	GCC
C171058106	Gammaproteobacteria	Francisella tularensis subsp. tularensis NR-21737 (CP017155)	Gly	GCC
C171058115	Gammaproteobacteria	Francisella tularensis subsp. tularensis NR-21737 (CP017155)	Gly	GCC
C171071969	Gammaproteobacteria	Francisella noatunensis subsp. orientalis F1 (CP018051)	Gly	GCC
C171071980	Gammaproteobacteria	Francisella noatunensis subsp. orientalis F1 (CP018051)	Gly	GCC
C171072630	Gammaproteobacteria	Francisella hispaniensis FSC454 CCUG 58020 (CP018093)	Gly	GCC
C171072643	Gammaproteobacteria	Francisella hispaniensis FSC454 CCUG 58020 (CP018093)	Gly	GCC