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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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HOW TO USE
tRNA gene List
Caldisericota
HIT:
93 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>W131157728
AQSQ01000007
Caldisericota
Caldiserica bacterium JGI 0000059-M03 [AQSQ]
5891
5966
+
Arg
TCG
[ENA]
¡û
>W131157729
AQSQ01000007
Caldisericota
Caldiserica bacterium JGI 0000059-M03 [AQSQ]
7293
7367
+
Lys
CTT
[ENA]
¡û
>W131157730
AQSQ01000007
Caldisericota
Caldiserica bacterium JGI 0000059-M03 [AQSQ]
7385
7459
+
Gly
GCC
[ENA]
¡û
>W131157731
AQSQ01000007
Caldisericota
Caldiserica bacterium JGI 0000059-M03 [AQSQ]
7471
7552
+
Leu
TAG
[ENA]
¡û
>W131157734
AQSQ01000027
Caldisericota
Caldiserica bacterium JGI 0000059-M03 [AQSQ]
12692
12766
+
Asn
GTT
[ENA]
¡û
>W131157738
AQSQ01000028
Caldisericota
Caldiserica bacterium JGI 0000059-M03 [AQSQ]
14158
14074
-
Leu
TAA
[ENA]
¡û
>W131157733
AQSQ01000026
Caldisericota
Caldiserica bacterium JGI 0000059-M03 [AQSQ]
14944
14870
-
Glu
TTC
[ENA]
¡û
>W131157732
AQSQ01000026
Caldisericota
Caldiserica bacterium JGI 0000059-M03 [AQSQ]
15021
14947
-
Lys
TTT
[ENA]
¡û
>W131157737
AQSQ01000028
Caldisericota
Caldiserica bacterium JGI 0000059-M03 [AQSQ]
15481
15409
-
Cys
GCA
[ENA]
¡û
>W131157736
AQSQ01000028
Caldisericota
Caldiserica bacterium JGI 0000059-M03 [AQSQ]
15567
15493
-
Gly
CCC
[ENA]
¡û
>W133003040
AQSQ01000019
Caldisericota
Caldiserica bacterium JGI 0000059-M03 [AQSQ]
16815
16908
+
Ser
GGA
[ENA]
¡û
>W131157735
AQSQ01000028
Caldisericota
Caldiserica bacterium JGI 0000059-M03 [AQSQ]
24313
24229
-
Leu
CAG
[ENA]
¡û
>C121000406
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
319816
319890
+
Gly
CCC
[Ensembl]
¡û
>C121000407
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
319892
319966
+
Cys
GCA
[Ensembl]
¡û
>C121000408
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
319975
320061
+
Leu
TAA
[Ensembl]
¡û
>C121000451
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
325767
325693
-
Thr
CGT
[Ensembl]
¡û
>C121000450
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
325868
325794
-
Gly
GCC
[Ensembl]
¡û
>C121000449
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
325968
325892
-
Asp
GTC
[Ensembl]
¡û
>C121000448
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
326089
326015
-
Val
CAC
[Ensembl]
¡û
>C121000447
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
326183
326109
-
Glu
TTC
[Ensembl]
¡û
>C121000446
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
326263
326188
-
Lys
TTT
[Ensembl]
¡û
>C121000445
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
358824
358750
-
Glu
CTC
[Ensembl]
¡û
>C121000444
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
358901
358828
-
Gln
CTG
[Ensembl]
¡û
>C121000443
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
553202
553127
-
Ala
GGC
[Ensembl]
¡û
>C121000442
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
585103
585029
-
Gln
TTG
[Ensembl]
¡û
>C121000409
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
586813
586896
+
Leu
CAG
[Ensembl]
¡û
>C121000410
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
628375
628459
+
Leu
GAG
[Ensembl]
¡û
>C121000411
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
628463
628537
+
Val
TAC
[Ensembl]
¡û
>C121000412
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
628541
628616
+
Phe
GAA
[Ensembl]
¡û
>C121000441
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
656715
656640
-
Met
CAT
[Ensembl]
¡û
>C121000413
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
697861
697938
+
Pro
TGG
[Ensembl]
¡û
>C121000414
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
697945
698021
+
Arg
TCT
[Ensembl]
¡û
>C121000415
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
698028
698104
+
His
GTG
[Ensembl]
¡û
>C121000416
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
698107
698183
+
Arg
CCT
[Ensembl]
¡û
>C121000417
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
698187
698263
+
Arg
TCG
[Ensembl]
¡û
>C121000418
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
698277
698352
+
Lys
CTT
[Ensembl]
¡û
>C121000419
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
698376
698460
+
Leu
TAG
[Ensembl]
¡û
>C121000420
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
738999
739075
+
Arg
ACG
[Ensembl]
¡û
>C121000421
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
798355
798445
+
Ser
GGA
[Ensembl]
¡û
>C121000440
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
866899
866825
-
Ala
TGC
[Ensembl]
¡û
>C121000439
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
866981
866905
-
Ile
GAT
[Ensembl]
¡û
>C121000438
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
926043
925968
-
Asn
GTT
[Ensembl]
¡û
>C121000437
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
958354
958265
-
Ser
CGA
[Ensembl]
¡û
>C121000422
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
1052530
1052616
+
Ser
TGA
[Ensembl]
¡û
>C121000436
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
1071015
1070940
-
Trp
CCA
[Ensembl]
¡û
>C121000435
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
1072520
1072445
-
Thr
GGT
[Ensembl]
¡û
>C121000434
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
1072623
1072547
-
Met
CAT
[Ensembl]
¡û
>C121000433
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
1072701
1072627
-
Gly
TCC
[Ensembl]
¡û
>C121000432
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
1072791
1072705
-
Tyr
GTA
[Ensembl]
¡û
>C121000431
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
1072869
1072794
-
Thr
TGT
[Ensembl]
¡û
>C121000430
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
1126072
1125995
-
Pro
CGG
[Ensembl]
¡û
>C121000429
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
1126153
1126076
-
Pro
GGG
[Ensembl]
¡û
>C121000428
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
1127362
1127288
-
Met
CAT
[Ensembl]
¡û
>C121000427
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
1227605
1227531
-
Val
GAC
[Ensembl]
¡û
>C121000423
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
1250764
1250853
+
Leu
CAA
[Ensembl]
¡û
>C121000424
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
1284764
1284857
+
Ser
GCT
[Ensembl]
¡û
>C121000426
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
1306194
1306120
-
Arg
CCG
[Ensembl]
¡û
>C121000425
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
1423147
1423073
-
Ala
CGC
[Ensembl]
¡û
>W1711583922
MNXV01000045
Caldisericota
Caldisericum sp. CG2_30_36_11 [MNXV]
92
18
-
Ala
CGC
[ENA]
¡û
>W1711583920
MNXV01000024
Caldisericota
Caldisericum sp. CG2_30_36_11 [MNXV]
310
235
-
Phe
GAA
[ENA]
¡û
>W1711583921
MNXV01000026
Caldisericota
Caldisericum sp. CG2_30_36_11 [MNXV]
392
467
+
Trp
CCA
[ENA]
¡û
>W1711583919
MNXV01000024
Caldisericota
Caldisericum sp. CG2_30_36_11 [MNXV]
394
320
-
Val
TAC
[ENA]
¡û
>W1711583918
MNXV01000024
Caldisericota
Caldisericum sp. CG2_30_36_11 [MNXV]
490
406
-
Leu
AAG
[ENA]
¡û
>W1711583929
MNXV01000070
Caldisericota
Caldisericum sp. CG2_30_36_11 [MNXV]
547
458
-
Leu
CAA
[ENA]
¡û
>W1711583931
MNXV01000073
Caldisericota
Caldisericum sp. CG2_30_36_11 [MNXV]
685
611
-
Ala
TGC
[ENA]
¡û
>W1711583930
MNXV01000073
Caldisericota
Caldisericum sp. CG2_30_36_11 [MNXV]
767
691
-
Ile
GAT
[ENA]
¡û
>W1711583909
MNXV01000002
Caldisericota
Caldisericum sp. CG2_30_36_11 [MNXV]
2226
2134
-
Ser
GCT
[ENA]
¡û
>W1711583927
MNXV01000056
Caldisericota
Caldisericum sp. CG2_30_36_11 [MNXV]
3003
3093
+
Ser
CGA
[ENA]
¡û
>W1711583926
MNXV01000055
Caldisericota
Caldisericum sp. CG2_30_36_11 [MNXV]
3272
3187
-
Leu
CAG
[ENA]
¡û
>W1711583925
MNXV01000055
Caldisericota
Caldisericum sp. CG2_30_36_11 [MNXV]
4987
5061
+
Gln
TTG
[ENA]
¡û
>W1711583923
MNXV01000051
Caldisericota
Caldisericum sp. CG2_30_36_11 [MNXV]
6099
6175
+
Arg
ACG
[ENA]
¡û
>W1711583928
MNXV01000056
Caldisericota
Caldisericum sp. CG2_30_36_11 [MNXV]
8053
8128
+
Asn
GTT
[ENA]
¡û
>W1711583943
MNXV01000087
Caldisericota
Caldisericum sp. CG2_30_36_11 [MNXV]
9005
8931
-
Glu
CTC
[ENA]
¡û
>W1711583942
MNXV01000087
Caldisericota
Caldisericum sp. CG2_30_36_11 [MNXV]
9084
9011
-
Gln
CTG
[ENA]
¡û
>W1711583924
MNXV01000054
Caldisericota
Caldisericum sp. CG2_30_36_11 [MNXV]
9572
9647
+
Met
CAT
[ENA]
¡û
>W1711583932
MNXV01000075
Caldisericota
Caldisericum sp. CG2_30_36_11 [MNXV]
11586
11496
-
Ser
GGA
[ENA]
¡û
>W1711583910
MNXV01000010
Caldisericota
Caldisericum sp. CG2_30_36_11 [MNXV]
13396
13470
+
Val
GAC
[ENA]
¡û
>W1711583933
MNXV01000083
Caldisericota
Caldisericum sp. CG2_30_36_11 [MNXV]
16302
16376
+
Gly
CCC
[ENA]
¡û
>W1711583934
MNXV01000083
Caldisericota
Caldisericum sp. CG2_30_36_11 [MNXV]
16379
16453
+
Cys
GCA
[ENA]
¡û
>W1711583935
MNXV01000083
Caldisericota
Caldisericum sp. CG2_30_36_11 [MNXV]
16464
16550
+
Leu
TAA
[ENA]
¡û
>W1711583941
MNXV01000083
Caldisericota
Caldisericum sp. CG2_30_36_11 [MNXV]
19808
19734
-
Thr
CGT
[ENA]
¡û
>W1711583940
MNXV01000083
Caldisericota
Caldisericum sp. CG2_30_36_11 [MNXV]
19904
19830
-
Gly
GCC
[ENA]
¡û
>W1711583939
MNXV01000083
Caldisericota
Caldisericum sp. CG2_30_36_11 [MNXV]
19988
19912
-
Asp
GTC
[ENA]
¡û
>W1711583938
MNXV01000083
Caldisericota
Caldisericum sp. CG2_30_36_11 [MNXV]
20119
20045
-
Val
CAC
[ENA]
¡û
>W1711583937
MNXV01000083
Caldisericota
Caldisericum sp. CG2_30_36_11 [MNXV]
20198
20124
-
Glu
TTC
[ENA]
¡û
>W1711583936
MNXV01000083
Caldisericota
Caldisericum sp. CG2_30_36_11 [MNXV]
20277
20202
-
Lys
TTT
[ENA]
¡û
>W1711583917
MNXV01000023
Caldisericota
Caldisericum sp. CG2_30_36_11 [MNXV]
35595
35512
-
Leu
TAG
[ENA]
¡û
>W1711583916
MNXV01000023
Caldisericota
Caldisericum sp. CG2_30_36_11 [MNXV]
35690
35615
-
Lys
CTT
[ENA]
¡û
>W1711583915
MNXV01000023
Caldisericota
Caldisericum sp. CG2_30_36_11 [MNXV]
35775
35699
-
Arg
TCG
[ENA]
¡û
>W1711583914
MNXV01000023
Caldisericota
Caldisericum sp. CG2_30_36_11 [MNXV]
35855
35779
-
Arg
CCT
[ENA]
¡û
>W1711583913
MNXV01000023
Caldisericota
Caldisericum sp. CG2_30_36_11 [MNXV]
35950
35875
-
His
GTG
[ENA]
¡û
>W1711583912
MNXV01000023
Caldisericota
Caldisericum sp. CG2_30_36_11 [MNXV]
36031
35955
-
Arg
TCT
[ENA]
¡û
>W1711583911
MNXV01000023
Caldisericota
Caldisericum sp. CG2_30_36_11 [MNXV]
36110
36034
-
Pro
TGG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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