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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
CandidatusAcetothermia
HIT:
92 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>W1610612989
LGFI01000001
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
54487
54399
-
Leu
TAA
[ENA]
¡û
>W1710734271
LGFI01000001
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
54487
54399
-
Leu
TAA
[ENA]
¡û
>W1610612994
LGFI01000004
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
93344
93257
-
Ser
CGA
[ENA]
¡û
>W1710734276
LGFI01000004
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
93344
93257
-
Ser
CGA
[ENA]
¡û
>W1610613006
LGFI01000009
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
82574
82488
-
Leu
GAG
[ENA]
¡û
>W1710734296
LGFI01000018
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
25838
25752
-
Tyr
GTA
[ENA]
¡û
>W1710734288
LGFI01000009
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
82574
82488
-
Leu
GAG
[ENA]
¡û
>W1610613014
LGFI01000018
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
25838
25752
-
Tyr
GTA
[ENA]
¡û
>W1710734294
LGFI01000018
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
34267
34182
-
Leu
CAA
[ENA]
¡û
>W1610613012
LGFI01000018
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
34267
34182
-
Leu
CAA
[ENA]
¡û
>W1710734269
LGFI01000001
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
54695
54611
-
Leu
TAG
[ENA]
¡û
>W1610612987
LGFI01000001
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
54695
54611
-
Leu
TAG
[ENA]
¡û
>W1710734266
LGFI01000001
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
59145
59068
-
Arg
TCT
[ENA]
¡û
>W1610612986
LGFI01000001
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
58862
58785
-
Arg
TCG
[ENA]
¡û
>W1610612982
LGFI01000001
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
59486
59409
-
Pro
CGG
[ENA]
¡û
>W1710734264
LGFI01000001
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
59486
59409
-
Pro
CGG
[ENA]
¡û
>W1710734268
LGFI01000001
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
58862
58785
-
Arg
TCG
[ENA]
¡û
>W1610612984
LGFI01000001
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
59145
59068
-
Arg
TCT
[ENA]
¡û
>W1610612990
LGFI01000001
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
54353
54277
-
Met
CAT
[ENA]
¡û
>W1610612992
LGFI01000001
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
29510
29434
-
Ile
GAT
[ENA]
¡û
>W1710734289
LGFI01000010
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
8972
8896
-
Pro
TGG
[ENA]
¡û
>W1610613007
LGFI01000010
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
8972
8896
-
Pro
TGG
[ENA]
¡û
>W1710734274
LGFI01000001
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
29510
29434
-
Ile
GAT
[ENA]
¡û
>W1710734272
LGFI01000001
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
54353
54277
-
Met
CAT
[ENA]
¡û
>W1610613021
LGFI01000021
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
24600
24524
-
Ala
TGC
[ENA]
¡û
>W1710734303
LGFI01000021
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
24600
24524
-
Ala
TGC
[ENA]
¡û
>W1710734297
LGFI01000018
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
25708
25633
-
Thr
GGT
[ENA]
¡û
>W1710734273
LGFI01000001
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
54074
53999
-
Ala
CGC
[ENA]
¡û
>W1610613015
LGFI01000018
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
25708
25633
-
Thr
GGT
[ENA]
¡û
>W1610613016
LGFI01000018
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
24143
24068
-
Trp
CCA
[ENA]
¡û
>W1610612995
LGFI01000004
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
93197
93122
-
Arg
GCG
[ENA]
¡û
>W1710734277
LGFI01000004
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
93197
93122
-
Arg
GCG
[ENA]
¡û
>W1610612991
LGFI01000001
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
54074
53999
-
Ala
CGC
[ENA]
¡û
>W1710734298
LGFI01000018
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
24143
24068
-
Trp
CCA
[ENA]
¡û
>W1710734295
LGFI01000018
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
25997
25923
-
Thr
TGT
[ENA]
¡û
>W1710734267
LGFI01000001
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
59021
58947
-
His
GTG
[ENA]
¡û
>W1610613013
LGFI01000018
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
25997
25923
-
Thr
TGT
[ENA]
¡û
>W1610612985
LGFI01000001
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
59021
58947
-
His
GTG
[ENA]
¡û
>W1630010664
LGFI01000001
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
54228
54154
-
Met
CAT
[ENA]
¡û
>W1730012971
LGFI01000001
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
54228
54154
-
Met
CAT
[ENA]
¡û
>W1710734263
LGFI01000001
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
159537
159464
-
Gln
CTG
[ENA]
¡û
>W1610612983
LGFI01000001
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
59302
59229
-
Gly
TCC
[ENA]
¡û
>W1610612981
LGFI01000001
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
159537
159464
-
Gln
CTG
[ENA]
¡û
>W1710734265
LGFI01000001
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
59302
59229
-
Gly
TCC
[ENA]
¡û
>W1710734299
LGFI01000019
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
12297
12224
-
Thr
CGT
[ENA]
¡û
>W1610612988
LGFI01000001
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
54568
54495
-
Gly
GCC
[ENA]
¡û
>W1710734270
LGFI01000001
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
54568
54495
-
Gly
GCC
[ENA]
¡û
>W1610613017
LGFI01000019
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
12297
12224
-
Thr
CGT
[ENA]
¡û
>W1610613004
LGFI01000007
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
12708
12636
-
Val
CAC
[ENA]
¡û
>W1710734286
LGFI01000007
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
12708
12636
-
Val
CAC
[ENA]
¡û
>W1610613011
LGFI01000016
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
102
30
-
Cys
GCA
[ENA]
¡û
>W1710734293
LGFI01000016
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
102
30
-
Cys
GCA
[ENA]
¡û
>W1610613005
LGFI01000008
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
34554
34483
-
Met
CAT
[ENA]
¡û
>W1710734287
LGFI01000008
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
34554
34483
-
Met
CAT
[ENA]
¡û
>W1610612978
LGFI01000001
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
37390
37462
+
Ala
GGC
[ENA]
¡û
>W1710734260
LGFI01000001
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
37390
37462
+
Ala
GGC
[ENA]
¡û
>W1610612998
LGFI01000006
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
38117
38190
+
Lys
CTT
[ENA]
¡û
>W1610612980
LGFI01000001
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
205208
205281
+
Gln
TTG
[ENA]
¡û
>W1710734280
LGFI01000006
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
38117
38190
+
Lys
CTT
[ENA]
¡û
>W1710734262
LGFI01000001
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
205208
205281
+
Gln
TTG
[ENA]
¡û
>W1610613001
LGFI01000006
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
38471
38545
+
Val
TAC
[ENA]
¡û
>W1710734283
LGFI01000006
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
38471
38545
+
Val
TAC
[ENA]
¡û
>W1710734304
LGFI01000022
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
7476
7551
+
Glu
CTC
[ENA]
¡û
>W1610613022
LGFI01000022
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
7476
7551
+
Glu
CTC
[ENA]
¡û
>W1610613020
LGFI01000021
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
23463
23538
+
Arg
CCG
[ENA]
¡û
>W1610613018
LGFI01000021
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
20355
20430
+
Gly
CCC
[ENA]
¡û
>W1610613009
LGFI01000011
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
69882
69957
+
Asn
GTT
[ENA]
¡û
>W1710734281
LGFI01000006
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
38254
38329
+
Lys
TTT
[ENA]
¡û
>W1710734285
LGFI01000006
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
38812
38887
+
Phe
GAA
[ENA]
¡û
>W1610613008
LGFI01000011
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
29
104
+
Val
GAC
[ENA]
¡û
>W1610613003
LGFI01000006
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
38812
38887
+
Phe
GAA
[ENA]
¡û
>W1710734290
LGFI01000011
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
29
104
+
Val
GAC
[ENA]
¡û
>W1710734291
LGFI01000011
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
69882
69957
+
Asn
GTT
[ENA]
¡û
>W1610612999
LGFI01000006
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
38254
38329
+
Lys
TTT
[ENA]
¡û
>W1710734300
LGFI01000021
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
20355
20430
+
Gly
CCC
[ENA]
¡û
>W1710734302
LGFI01000021
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
23463
23538
+
Arg
CCG
[ENA]
¡û
>W1610612979
LGFI01000001
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
62680
62756
+
Pro
GGG
[ENA]
¡û
>W1710734261
LGFI01000001
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
62680
62756
+
Pro
GGG
[ENA]
¡û
>W1710734282
LGFI01000006
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
38330
38407
+
Glu
TTC
[ENA]
¡û
>W1610613000
LGFI01000006
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
38330
38407
+
Glu
TTC
[ENA]
¡û
>W1610612996
LGFI01000005
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
50972
51049
+
Arg
CCT
[ENA]
¡û
>W1710734278
LGFI01000005
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
50972
51049
+
Arg
CCT
[ENA]
¡û
>W1610613002
LGFI01000006
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
38639
38717
+
Asp
GTC
[ENA]
¡û
>W1710734284
LGFI01000006
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
38639
38717
+
Asp
GTC
[ENA]
¡û
>W1710734275
LGFI01000004
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
14571
14657
+
Ser
TGA
[ENA]
¡û
>W1610612993
LGFI01000004
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
14571
14657
+
Ser
TGA
[ENA]
¡û
>W1610613010
LGFI01000014
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
48808
48897
+
Leu
CAG
[ENA]
¡û
>W1710734292
LGFI01000014
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
48808
48897
+
Leu
CAG
[ENA]
¡û
>W1610612997
LGFI01000005
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
52077
52167
+
Ser
GGA
[ENA]
¡û
>W1710734279
LGFI01000005
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
52077
52167
+
Ser
GGA
[ENA]
¡û
>W1610613019
LGFI01000021
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
23311
23405
+
Ser
GCT
[ENA]
¡û
>W1710734301
LGFI01000021
CandidatusAcetothermia
Acetothermia bacterium 64_32 (LGFI)
23311
23405
+
Ser
GCT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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