tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.176256 (83 seq.)
>W1711029642 LRFI01000070 Gammaproteobacteria Idiomarina sp. WRN-38 [LRFI] 273 197 - Ile GAT [ENA] ¡û
>W1711029644 LRFI01000076 Gammaproteobacteria Idiomarina sp. WRN-38 [LRFI] 275 199 - Ile GAT [ENA] ¡û
>W1711029658 LRFI01000092 Gammaproteobacteria Idiomarina sp. WRN-38 [LRFI] 5 81 + Ile GAT [ENA] ¡û
>W1711029660 LRFI01000094 Gammaproteobacteria Idiomarina sp. WRN-38 [LRFI] 80 4 - Ile GAT [ENA] ¡û
>W1711029661 LRFI01000126 Gammaproteobacteria Idiomarina sp. WRN-38 [LRFI] 142 218 + Ile GAT [ENA] ¡û
>W1711625350 MPIO01000025 Gammaproteobacteria Atopomonas hussainii [MPIO] 3613 3537 - Ile GAT [ENA] ¡û
>WENV180096643 MTBK01140723 [MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge 105 29 - Ile GAT [ENA] ¢þ
>WENV170012492 ASRK01007291 [ASRK] bioreactor metagenome; day 48 sample from continuous culture bioreactor inoculated with sediment from the German Wadden 78 2 - Ile GAT [ENA] ¢þ
>WENV170012576 ASRL01003705 [ASRL] bioreactor metagenome; day 67 sample from continuous culture bioreactor inoculated with sediment from the German Wadden 246 322 + Ile GAT [ENA] ¢þ
>WENV170012797 ASRO01002651 [ASRO] bioreactor metagenome; day 119 sample from continuous culture bioreactor inoculated with sediment from the German Wadden 813 889 + Ile GAT [ENA] ¢þ
>WENV170014489 AYRG01002634 [AYRG] bioreactor metagenome; day 33 sample from continuous culture bioreactor with low C:N ratio inoculated with sediment 813 889 + Ile GAT [ENA] ¢þ
>WENV170635453 JDSF01025794 [JDSF] bioreactor metagenome; continuous culture bioreactor denitrification-DNRA 227 151 - Ile GAT [ENA] ¢þ
>WENV170646441 JQGR01004464 [JQGR] bioreactor metagenome; continuous culture inoculated with microbial biomass from the upper 2 cm of a marine 480 556 + Ile GAT [ENA] ¢þ
>WENV170685929 LFRM01116352 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 1844 1768 - Ile GAT [ENA] ¢þ
>WENV170689308 LFRM01288383 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 90 166 + Ile GAT [ENA] ¢þ
>WENV170690157 LFRM01327619 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 445 521 + Ile GAT [ENA] ¢þ
>WENV170704253 LLEJ01000628 [LLEJ] bioreactor metagenome; day101 10degC chemostat 2011 inoculated with Wadden Sea sediment taken from the upper 2 cm of the 883 959 + Ile GAT [ENA] ¢þ
>WENV170704655 LLEL01023449 [LLEL] bioreactor metagenome; day35 10degC chemostat 2012 inoculated with Wadden Sea sediment taken from the upper 2 cm of the 2 78 + Ile GAT [ENA] ¢þ
>WENV170704729 LLEM01001052 [LLEM] bioreactor metagenome; day64 10degC chemostat 2012 inoculated with Wadden Sea sediment taken from the upper 2 cm of the 197 121 - Ile GAT [ENA] ¢þ
>WENV170719453 LSQX01115316 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 1120 1044 - Ile GAT [ENA] ¢þ
>SRA1008762 SRR020491.17375 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 83 7 - Ile GAT [SRA]
>C151022930 CP007399 Gammaproteobacteria Pseudomonas aeruginosa F22031 [CP007399] 3251287 3251363 + Ile GAT [Ensembl] ¡û
>C151022966 CP007399 Gammaproteobacteria Pseudomonas aeruginosa F22031 [CP007399] 2310852 2310776 - Ile GAT [Ensembl] ¡û
>C151022971 CP007399 Gammaproteobacteria Pseudomonas aeruginosa F22031 [CP007399] 1525003 1524927 - Ile GAT [Ensembl] ¡û
>C151022977 CP007399 Gammaproteobacteria Pseudomonas aeruginosa F22031 [CP007399] 1032288 1032212 - Ile GAT [Ensembl] ¡û
>C151025984 CP007509 Gammaproteobacteria Stutzerimonas stutzeri 19SMN4 [CP007509] 2187898 2187974 + Ile GAT [Ensembl] ¡û
>C151025994 CP007509 Gammaproteobacteria Stutzerimonas stutzeri 19SMN4 [CP007509] 3871140 3871064 - Ile GAT [Ensembl] ¡û
>C151026002 CP007509 Gammaproteobacteria Stutzerimonas stutzeri 19SMN4 [CP007509] 3544909 3544833 - Ile GAT [Ensembl] ¡û
>C151026010 CP007509 Gammaproteobacteria Stutzerimonas stutzeri 19SMN4 [CP007509] 2918123 2918047 - Ile GAT [Ensembl] ¡û
>C151035490 CP008696 Gammaproteobacteria Pseudomonas chlororaphis PA23 [CP008696] 1596 1672 + Ile GAT [Ensembl] ¡û
>C151035492 CP008696 Gammaproteobacteria Pseudomonas chlororaphis PA23 [CP008696] 710156 710232 + Ile GAT [Ensembl] ¡û
>C151035516 CP008696 Gammaproteobacteria Pseudomonas chlororaphis PA23 [CP008696] 6335137 6335061 - Ile GAT [Ensembl] ¡û
>C151035526 CP008696 Gammaproteobacteria Pseudomonas chlororaphis PA23 [CP008696] 5840482 5840406 - Ile GAT [Ensembl] ¡û
>C151035537 CP008696 Gammaproteobacteria Pseudomonas chlororaphis PA23 [CP008696] 4681635 4681559 - Ile GAT [Ensembl] ¡û
>C151071237 CP010555 Gammaproteobacteria Pseudomonas aeruginosa FRD1 [CP010555] 4522395 4522471 + Ile GAT [Ensembl] ¡û
>C151071242 CP010555 Gammaproteobacteria Pseudomonas aeruginosa FRD1 [CP010555] 5295892 5295968 + Ile GAT [Ensembl] ¡û
>C151071248 CP010555 Gammaproteobacteria Pseudomonas aeruginosa FRD1 [CP010555] 5868797 5868873 + Ile GAT [Ensembl] ¡û
>C151071265 CP010555 Gammaproteobacteria Pseudomonas aeruginosa FRD1 [CP010555] 3510247 3510171 - Ile GAT [Ensembl] ¡û
>C151093907 CP012358 Gammaproteobacteria Thiopseudomonas alkaliphila B4199 [CP012358] 410899 410975 + Ile GAT - ¡û
>C151093920 CP012358 Gammaproteobacteria Thiopseudomonas alkaliphila B4199 [CP012358] 2045103 2045179 + Ile GAT - ¡û
>C151093928 CP012358 Gammaproteobacteria Thiopseudomonas alkaliphila B4199 [CP012358] 2482521 2482597 + Ile GAT - ¡û
>C151093933 CP012358 Gammaproteobacteria Thiopseudomonas alkaliphila B4199 [CP012358] 1817460 1817384 - Ile GAT - ¡û
>C151093943 CP012358 Gammaproteobacteria Thiopseudomonas alkaliphila B4199 [CP012358] 1123138 1123062 - Ile GAT - ¡û
>C151093960 CP012359 Gammaproteobacteria Thiopseudomonas alkaliphila C6819 [CP012359] 390476 390552 + Ile GAT - ¡û
>C151093987 CP012359 Gammaproteobacteria Thiopseudomonas alkaliphila C6819 [CP012359] 1422010 1421934 - Ile GAT - ¡û
>C151093995 CP012359 Gammaproteobacteria Thiopseudomonas alkaliphila C6819 [CP012359] 1034749 1034673 - Ile GAT - ¡û
>C151094012 CP012360 Gammaproteobacteria Thiopseudomonas alkaliphila C6918 [CP012360] 839349 839425 + Ile GAT - ¡û
>C151094020 CP012360 Gammaproteobacteria Thiopseudomonas alkaliphila C6918 [CP012360] 1239076 1239152 + Ile GAT - ¡û
>C151094026 CP012360 Gammaproteobacteria Thiopseudomonas alkaliphila C6918 [CP012360] 1641445 1641521 + Ile GAT - ¡û
>C151094050 CP012360 Gammaproteobacteria Thiopseudomonas alkaliphila C6918 [CP012360] 629291 629215 - Ile GAT - ¡û
>C151094061 CP012360 Gammaproteobacteria Thiopseudomonas alkaliphila C6918 [CP012360] 8329 8253 - Ile GAT - ¡û
>C151094064 CP012361 Gammaproteobacteria Thiopseudomonas alkaliphila D2441 [CP012361] 23774 23850 + Ile GAT - ¡û
>C151094077 CP012361 Gammaproteobacteria Thiopseudomonas alkaliphila D2441 [CP012361] 1284771 1284847 + Ile GAT - ¡û
>C151094087 CP012361 Gammaproteobacteria Thiopseudomonas alkaliphila D2441 [CP012361] 1951599 1951675 + Ile GAT - ¡û
>C151094100 CP012361 Gammaproteobacteria Thiopseudomonas alkaliphila D2441 [CP012361] 673122 673046 - Ile GAT - ¡û
>C151094125 CP012362 Gammaproteobacteria Thiopseudomonas alkaliphila D3318 [CP012362] 1888895 1888971 + Ile GAT - ¡û
>C151094136 CP012362 Gammaproteobacteria Thiopseudomonas alkaliphila D3318 [CP012362] 1672318 1672242 - Ile GAT - ¡û
>C151094146 CP012362 Gammaproteobacteria Thiopseudomonas alkaliphila D3318 [CP012362] 1078985 1078909 - Ile GAT - ¡û
>C151094153 CP012362 Gammaproteobacteria Thiopseudomonas alkaliphila D3318 [CP012362] 646989 646913 - Ile GAT - ¡û
>C151094163 CP012363 Gammaproteobacteria Thiopseudomonas alkaliphila E1086 [CP012363] 24158 24234 + Ile GAT - ¡û
>C151094183 CP012363 Gammaproteobacteria Thiopseudomonas alkaliphila E1086 [CP012363] 2017298 2017374 + Ile GAT - ¡û
>C151094194 CP012363 Gammaproteobacteria Thiopseudomonas alkaliphila E1086 [CP012363] 1185492 1185416 - Ile GAT - ¡û
>C151094202 CP012363 Gammaproteobacteria Thiopseudomonas alkaliphila E1086 [CP012363] 776026 775950 - Ile GAT - ¡û
>C151094215 CP012364 Gammaproteobacteria Thiopseudomonas alkaliphila E1148 [CP012364] 23784 23860 + Ile GAT - ¡û
>C151094226 CP012364 Gammaproteobacteria Thiopseudomonas alkaliphila E1148 [CP012364] 1334545 1334621 + Ile GAT - ¡û
>C151094236 CP012364 Gammaproteobacteria Thiopseudomonas alkaliphila E1148 [CP012364] 1985488 1985564 + Ile GAT - ¡û
>C151094247 CP012364 Gammaproteobacteria Thiopseudomonas alkaliphila E1148 [CP012364] 1104287 1104211 - Ile GAT - ¡û
>C151094255 CP012364 Gammaproteobacteria Thiopseudomonas alkaliphila E1148 [CP012364] 676537 676461 - Ile GAT - ¡û
>W1511652188 LEGV01000050 Gammaproteobacteria Pseudomonas aeruginosa Pae_CF67.08k [LEGV] 40178 40254 + Ile GAT [ENA] ¡û
>C161041348 CP012365 Gammaproteobacteria Thiopseudomonas alkaliphila E5571 [CP012365] 24595 24671 + Ile GAT [Ensembl] ¡û
>C161041361 CP012365 Gammaproteobacteria Thiopseudomonas alkaliphila E5571 [CP012365] 1567017 1567093 + Ile GAT [Ensembl] ¡û
>C161041369 CP012365 Gammaproteobacteria Thiopseudomonas alkaliphila E5571 [CP012365] 1972720 1972796 + Ile GAT [Ensembl] ¡û
>C161041379 CP012365 Gammaproteobacteria Thiopseudomonas alkaliphila E5571 [CP012365] 1337701 1337625 - Ile GAT [Ensembl] ¡û
>C161041389 CP012365 Gammaproteobacteria Thiopseudomonas alkaliphila E5571 [CP012365] 702786 702710 - Ile GAT [Ensembl] ¡û
>W1610585670 LCYB01000001 Gammaproteobacteria Pseudomonas fluorescens [LCYB] 1747 1823 + Ile GAT [ENA] ¡û
>W1610877910 LRFI01000070 Gammaproteobacteria Idiomarina sp. WRN-38 [LRFI] 273 197 - Ile GAT [ENA] ¡û
>W1610877912 LRFI01000076 Gammaproteobacteria Idiomarina sp. WRN-38 [LRFI] 275 199 - Ile GAT [ENA] ¡û
>W1610877926 LRFI01000092 Gammaproteobacteria Idiomarina sp. WRN-38 [LRFI] 5 81 + Ile GAT [ENA] ¡û
>W1610877928 LRFI01000094 Gammaproteobacteria Idiomarina sp. WRN-38 [LRFI] 80 4 - Ile GAT [ENA] ¡û
>W1610877929 LRFI01000126 Gammaproteobacteria Idiomarina sp. WRN-38 [LRFI] 142 218 + Ile GAT [ENA] ¡û
>ENV002835 AY934322 Environmental sample from ENV division of INSDC 95 173 + Ile GAT [ENA]
>W1710544314 FOAS01000032 Gammaproteobacteria Atopomonas hussainii [FOAS] 147 223 + Ile GAT [ENA] ¡û
>W1710544316 FOAS01000045 Gammaproteobacteria Atopomonas hussainii [FOAS] 3613 3537 - Ile GAT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK