tRNA genes clustered and arranged according to each identical group

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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.180151 (89 seq.)
>W1710944106 LOQE01000001 Betaproteobacteria Tepidimonas taiwanensis [LOQE] 169620 169536 - Leu GAG [ENA] ¡û
>W1711135991 LUZR01000066 Betaproteobacteria Burkholderiales bacterium Beta_02 [LUZR] 19942 19858 - Leu GAG [ENA] ¡û
>W1711268806 LZDH01000056 Betaproteobacteria Tepidimonas fonticaldi [LZDH] 522971 523055 + Leu GAG [ENA] ¡û
>W1711387436 MEGQ01000023 Betaproteobacteria Thiomonas sp. SCN 64-16 [MEGQ] 20643 20727 + Leu GAG [ENA] ¡û
>W1711504511 MKUQ01000010 Betaproteobacteria Burkholderiales bacterium 70-64 [MKUQ] 181614 181530 - Leu GAG [ENA] ¡û
>W131178092 ARLH01000085 Betaproteobacteria Caldimonas manganoxidans ATCC BAA-369 [ARLH] 54377 54293 - Leu GAG [ENA] ¡û
>W1712110544 NJIH01000010 Betaproteobacteria Candidimonas nitroreducens [NJIH] 70768 70684 - Leu GAG [ENA] ¡û
>C171103242 CP020046 Betaproteobacteria Thiomonas intermedia ATCC 15466 [CP020046] 2547860 2547944 + Leu GAG - ¡û
>WENV180103086 OAPA01001601 [OAPA] marine metagenome; ENVO:00002010 910 826 - Leu GAG [ENA] ¢þ
>WENV180114280 OAPS01002566 [OAPS] marine metagenome; sea water 1069 1153 + Leu GAG [ENA] ¢þ
>WENV180209628 OBAL01008593 [OBAL] marine metagenome; ENVO:00002019, 'BRACKISH WATER 99 15 - Leu GAG [ENA] ¢þ
>WENV180360827 OBNU01032777 [OBNU] marine metagenome; ENVO:00000021 'freshwater lake 36 120 + Leu GAG [ENA] ¢þ
>WENV180369101 OBOG01025507 [OBOG] marine metagenome; seawater 488 404 - Leu GAG [ENA] ¢þ
>WENV180377459 OBON01026660 [OBON] marine metagenome; sea water 645 561 - Leu GAG [ENA] ¢þ
>WENV180635438 OCRD01034105 [OCRD] marine metagenome; seawater 371 287 - Leu GAG [ENA] ¢þ
>WENV181231903 OFEK01084741 [OFEK] activated sludge metagenome; Anaerobic digester 320 404 + Leu GAG [ENA] ¢þ
>WENV181411007 OGCI01010407 [OGCI] hot springs metagenome; Hot spring water 1667 1583 - Leu GAG [ENA] ¢þ
>W141139309 AWNL01000051 Betaproteobacteria Bordetella trematum CCUG 13902 [AWNL] 986 902 - Leu GAG [ENA] ¡û
>WENV181414192 OGCL01000088 [OGCL] hot springs metagenome; Hot spring water 84774 84858 + Leu GAG [ENA] ¢þ
>C08001865 AM902716 Betaproteobacteria Bordetella petrii DSM 12804 [AM902716] 1682300 1682384 + Leu GAG [Ensembl] ¡û
>WENV182578770 OJGP01002171 [OJGP] seawater metagenome; Sea water 2428 2344 - Leu GAG [ENA] ¢þ
>W141277148 JAEJ01000018 Betaproteobacteria Bordetella petrii J49 [JAEJ] 19048 18964 - Leu GAG [ENA] ¡û
>W141277445 JAEP01000003 Betaproteobacteria Bordetella petrii J51 [JAEP] 198068 197984 - Leu GAG [ENA] ¡û
>ENV08000754 ABMI01078031 saltern metagenome; microbial fraction from low salinity saltern in San Diego, CA 103 19 - Leu GAG [ENA] ¡û
>WENV183727856 PJTP01001474 [PJTP] soil metagenome; Soil (3) enriched on wood chips: alkali lignin treatment 195 279 + Leu GAG [ENA] ¢þ
>WENV183741211 PJUF01057821 [PJUF] feces metagenome; Chicken feces (3) enriched on wood chips 265 181 - Leu GAG [ENA] ¢þ
>WENV170018719 BBPD01000496 [BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California 47475 47391 - Leu GAG [ENA] ¢þ
>WENV170019808 BBPE01000709 [BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California 24338 24254 - Leu GAG [ENA] ¢þ
>WENV170621066 FUWD013047935 [FUWD] metagenome; unknown 654 570 - Leu GAG [ENA] ¢þ
>WENV170629233 FUWD013264698 [FUWD] metagenome; unknown 654 570 - Leu GAG [ENA] ¢þ
>WENV170652826 JRYH01038928 [JRYH] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater generated at dyes and 959 1043 + Leu GAG [ENA] ¢þ
>WENV170706192 LNAP01001618 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 15145 15061 - Leu GAG [ENA] ¢þ
>WENV170706339 LNAP01002248 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 2941 3025 + Leu GAG [ENA] ¢þ
>WENV170706655 LNAP01005245 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 116 200 + Leu GAG [ENA] ¢þ
>WENV170706838 LNAP01007464 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 9117 9033 - Leu GAG [ENA] ¢þ
>WENV170707512 LNAP01023508 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 373 457 + Leu GAG [ENA] ¢þ
>WENV170708090 LNAP01049337 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 1629 1545 - Leu GAG [ENA] ¢þ
>C181034356 CP018898 Betaproteobacteria Bordetella trematum [CP018898] 3170140 3170056 - Leu GAG - ¡û
>C181169423 CP028901 Betaproteobacteria Orrella marina HZ20 [CP028901] 2326071 2325987 - Leu GAG - ¡û
>C191004286 AP018718 Betaproteobacteria Sulfuricystis multivorans J5B [AP018718] 1216701 1216785 + Leu GAG - ¡û
>C191007515 AP019373 Betaproteobacteria Sulfuricystis thermophila M52 [AP019373] 1185285 1185369 + Leu GAG - ¡û
>C191012245 CP016340 Betaproteobacteria Bordetella trematum F581 [CP016340] 3344392 3344308 - Leu GAG - ¡û
>C191023124 CP022987 Betaproteobacteria Pollutimonas thiosulfatoxidans YE3 [CP022987] 389163 389247 + Leu GAG - ¡û
>W1910890545 NEVI01000005 Betaproteobacteria Bordetella genomosp. 7 7 AU23756 [NEVI] 204868 204952 + Leu GAG [ENA] ¡û
>W1910890639 NEVK01000003 Betaproteobacteria Bordetella genomosp. 7 7 AU18089 [NEVK] 373695 373779 + Leu GAG [ENA] ¡û
>W1910890850 NEVO01000004 Betaproteobacteria Bordetella genomosp. 4 4 AU14378 [NEVO] 240899 240983 + Leu GAG [ENA] ¡û
>W1910890958 NEVQ01000008 Betaproteobacteria Bordetella genomosp. 4 4 AU9919 [NEVQ] 131742 131826 + Leu GAG [ENA] ¡û
>W1910891111 NEVT01000003 Betaproteobacteria Bordetella genomosp. 2 2 AU8256 [NEVT] 679927 680011 + Leu GAG [ENA] ¡û
>W1911636093 PVTV01000014 Betaproteobacteria Jezberella montanilacus MWH-P2sevCIIIb [PVTV] 211202 211118 - Leu GAG [ENA] ¡û
>W1911701428 QNUI01000019 Betaproteobacteria Azohydromonas sediminis YIM 73032 [QNUI] 16926 17010 + Leu GAG [ENA] ¡û
>W1911702176 QOAZ01000005 Betaproteobacteria Azohydromonas sediminis SYSU G00088 [QOAZ] 68896 68980 + Leu GAG [ENA] ¡û
>SRA1000691 SRR001046.92295 Solar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138) 103 19 - Leu GAG [SRA]
>W1810062094 PDNV01000006 Betaproteobacteria Pollutimonas nitritireducens JR1/69-2-13 [PDNV] 327727 327643 - Leu GAG [ENA] ¡û
>W1810062116 PDNW01000001 Betaproteobacteria Pollutimonas subterranea JR1/69-3-13 [PDNW] 207299 207383 + Leu GAG [ENA] ¡û
>W1810273273 PSNX01000009 Betaproteobacteria Caldimonas caldifontis BCRC 80649 [PSNX] 53807 53723 - Leu GAG [ENA] ¡û
>SRA1052245 SRR035098.166590 454 Sequencing (SRP001819) 61 145 + Leu GAG [SRA]
>SRA1052587 SRR035098.232658 454 Sequencing (SRP001819) 61 145 + Leu GAG [SRA]
>SRA1053326 SRR035098.382825 454 Sequencing (SRP001819) 418 502 + Leu GAG [SRA]
>ENV09004077 ADIG01005316 Groundwater metagenome 4000601.lucy.pga.C1 555 639 + Leu GAG [ENA] ¡û
>W10105771 ACXV01000001 Betaproteobacteria Thiomonas intermedia K12 [ACXV] 189575 189659 + Leu GAG [ENA] ¡û
>C10113348 CP002021 Betaproteobacteria Thiomonas intermedia [CP002021] 2428133 2428049 - Leu GAG [Ensembl] ¡û
>W11108091 ACXV01000001 Betaproteobacteria Thiomonas intermedia K12 [ACXV] 189575 189659 + Leu GAG [ENA] ¡û
>W1510741281 CYHF01000006 Betaproteobacteria Thiomonas bhubaneswarensis DSM 18181 [CYHF] 174378 174462 + Leu GAG [ENA] ¡û
>W1511310853 JPQP01000022 Betaproteobacteria Bordetella trematum HR18 [JPQP] 537 453 - Leu GAG [ENA] ¡û
>W1511403227 JTKY01000029 Betaproteobacteria Tepidimonas taiwanensis VT154-175 [JTKY] 55205 55121 - Leu GAG [ENA] ¡û
>C121016364 FP475956 Betaproteobacteria Thiomonas arsenitoxydans 3As [FP475956] 2593899 2593815 - Leu GAG [Ensembl] ¡û
>C161109110 LT546645 Betaproteobacteria Bordetella trematum H044680328 [LT546645] 175609 175525 - Leu GAG [Ensembl] ¡û
>W1610074137 BCWK01000017 Betaproteobacteria Caldimonas taiwanensis NBRC 104434 [BCWK] 18373 18457 + Leu GAG [ENA] ¡û
>W1610085405 CTRI01000027 Betaproteobacteria Thiomonas arsenitoxydans B1 [CTRI] 87467 87383 - Leu GAG [ENA] ¡û
>W1610085434 CTRJ01000012 Betaproteobacteria Thiomonas arsenitoxydans CB6 [CTRJ] 229427 229511 + Leu GAG [ENA] ¡û
>W1610085487 CTRK01000047 Betaproteobacteria Thiomonas arsenitoxydans ACO3 [CTRK] 84824 84740 - Leu GAG [ENA] ¡û
>W1610085528 CTRL01000047 Betaproteobacteria Thiomonas arsenitoxydans ACO7 [CTRL] 84821 84737 - Leu GAG [ENA] ¡û
>W1610085578 CTRM01000059 Betaproteobacteria Thiomonas sp. CB3 [CTRM] 235266 235182 - Leu GAG [ENA] ¡û
>W1610447539 FKBR01000022 Betaproteobacteria Bordetella trematum [FKBR] 33427 33343 - Leu GAG [ENA] ¡û
>W1610447645 FKBT01000025 Betaproteobacteria Bordetella trematum [FKBT] 150193 150277 + Leu GAG [ENA] ¡û
>W1610632422 LIPV01000006 Betaproteobacteria Thiomonas bhubaneswarensis [LIPV] 174378 174462 + Leu GAG [ENA] ¡û
>W1610800406 LOQE01000001 Betaproteobacteria Tepidimonas taiwanensis [LOQE] 169620 169536 - Leu GAG [ENA] ¡û
>W1610947111 LUZR01000066 Betaproteobacteria Burkholderiales bacterium Beta_02 [LUZR] 19942 19858 - Leu GAG [ENA] ¡û
>W1611029618 LZDH01000056 Betaproteobacteria Tepidimonas fonticaldi [LZDH] 522971 523055 + Leu GAG [ENA] ¡û
>W1710071255 BCWK01000017 Betaproteobacteria Caldimonas taiwanensis NBRC 104434 [BCWK] 18373 18457 + Leu GAG [ENA] ¡û
>W1710089994 CTRI01000027 Betaproteobacteria Thiomonas arsenitoxydans B1 [CTRI] 87467 87383 - Leu GAG [ENA] ¡û
>W1710090023 CTRJ01000012 Betaproteobacteria Thiomonas arsenitoxydans CB6 [CTRJ] 229427 229511 + Leu GAG [ENA] ¡û
>W1710090076 CTRK01000047 Betaproteobacteria Thiomonas arsenitoxydans ACO3 [CTRK] 84824 84740 - Leu GAG [ENA] ¡û
>W1710090117 CTRL01000047 Betaproteobacteria Thiomonas arsenitoxydans ACO7 [CTRL] 84821 84737 - Leu GAG [ENA] ¡û
>W1710090167 CTRM01000059 Betaproteobacteria Thiomonas sp. CB3 [CTRM] 235266 235182 - Leu GAG [ENA] ¡û
>W1710447167 FKBR01000022 Betaproteobacteria Bordetella trematum [FKBR] 33427 33343 - Leu GAG [ENA] ¡û
>W1710447273 FKBT01000025 Betaproteobacteria Bordetella trematum [FKBT] 150193 150277 + Leu GAG [ENA] ¡û
>W1710586419 FQXE01000011 Betaproteobacteria Pollutimonas bauzanensis [FQXE] 79746 79830 + Leu GAG [ENA] ¡û
>W1710766808 LIPV01000006 Betaproteobacteria Thiomonas bhubaneswarensis [LIPV] 174378 174462 + Leu GAG [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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