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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.20564 (235 seq.)
>W1711174300
LWED01000016
Gammaproteobacteria
Shewanella baltica [LWED]
85247
85337
+
Ser
TGA
[ENA]
¡û
>W1711174306
LWED01000017
Gammaproteobacteria
Shewanella baltica [LWED]
3548
3458
-
Ser
TGA
[ENA]
¡û
>W1711174307
LWED01000017
Gammaproteobacteria
Shewanella baltica [LWED]
714
624
-
Ser
TGA
[ENA]
¡û
>W1711174308
LWED01000017
Gammaproteobacteria
Shewanella baltica [LWED]
92
2
-
Ser
TGA
[ENA]
¡û
>W1711174354
LWED01000067
Gammaproteobacteria
Shewanella baltica [LWED]
4232
4142
-
Ser
TGA
[ENA]
¡û
>W1711361056
MDKE01000008
Gammaproteobacteria
Oceanisphaera psychrotolerans [MDKE]
41986
41896
-
Ser
TGA
[ENA]
¡û
>W1711621588
MPDG02000001
Gammaproteobacteria
Shewanella sp. SACH [MPDG]
1731402
1731312
-
Ser
TGA
[ENA]
¡û
>W1711621589
MPDG02000001
Gammaproteobacteria
Shewanella sp. SACH [MPDG]
1728354
1728264
-
Ser
TGA
[ENA]
¡û
>W1711621595
MPDG02000001
Gammaproteobacteria
Shewanella sp. SACH [MPDG]
1293891
1293801
-
Ser
TGA
[ENA]
¡û
>W1711621644
MPDG02000017
Gammaproteobacteria
Shewanella sp. SACH [MPDG]
96
6
-
Ser
TGA
[ENA]
¡û
>W1711934410
NAJR01000004
Gammaproteobacteria
Shewanella sp. Shew256 [NAJR]
484519
484429
-
Ser
TGA
[ENA]
¡û
>W1711934411
NAJR01000004
Gammaproteobacteria
Shewanella sp. Shew256 [NAJR]
483783
483693
-
Ser
TGA
[ENA]
¡û
>W1711934438
NAJR01000010
Gammaproteobacteria
Shewanella sp. Shew256 [NAJR]
125055
124965
-
Ser
TGA
[ENA]
¡û
>W1712080460
NGZL01000052
Gammaproteobacteria
Shewanella putrefaciens [NGZL]
28905
28995
+
Ser
TGA
[ENA]
¡û
>W1712080461
NGZL01000052
Gammaproteobacteria
Shewanella putrefaciens [NGZL]
29788
29878
+
Ser
TGA
[ENA]
¡û
>WENV013513
AACY020372021
Marine microbial communities from Global Ocean Sampling (GOS)
22336
22428
+
Ser
TGA
[ENA]
>WENV013514
AACY020372021
Marine microbial communities from Global Ocean Sampling (GOS)
22900
22992
+
Ser
TGA
[ENA]
>C019790
CP000507
Gammaproteobacteria
Shewanella amazonensis SB2B [CP000507]
1963948
1964038
+
Ser
TGA
[Ensembl]
¡û
>C019791
CP000507
Gammaproteobacteria
Shewanella amazonensis SB2B [CP000507]
1964400
1964490
+
Ser
TGA
[Ensembl]
¡û
>C020630
CP000563
Gammaproteobacteria
Shewanella baltica OS155 [CP000563]
2512085
2512175
+
Ser
TGA
[Ensembl]
¡û
>C020698
CP000563
Gammaproteobacteria
Shewanella baltica OS155 [CP000563]
3005870
3005780
-
Ser
TGA
[Ensembl]
¡û
>C020699
CP000563
Gammaproteobacteria
Shewanella baltica OS155 [CP000563]
3002868
3002778
-
Ser
TGA
[Ensembl]
¡û
>C020700
CP000563
Gammaproteobacteria
Shewanella baltica OS155 [CP000563]
3002224
3002134
-
Ser
TGA
[Ensembl]
¡û
>C022245
CP000469
Gammaproteobacteria
Shewanella sp. ANA-3 [CP000469]
1887764
1887854
+
Ser
TGA
[Ensembl]
¡û
>C022246
CP000469
Gammaproteobacteria
Shewanella sp. ANA-3 [CP000469]
1888524
1888614
+
Ser
TGA
[Ensembl]
¡û
>C022252
CP000469
Gammaproteobacteria
Shewanella sp. ANA-3 [CP000469]
2469304
2469394
+
Ser
TGA
[Ensembl]
¡û
>C022347
CP000446
Gammaproteobacteria
Shewanella sp. MR-4 [CP000446]
1825840
1825930
+
Ser
TGA
[Ensembl]
¡û
>C022348
CP000446
Gammaproteobacteria
Shewanella sp. MR-4 [CP000446]
1826727
1826817
+
Ser
TGA
[Ensembl]
¡û
>C022354
CP000446
Gammaproteobacteria
Shewanella sp. MR-4 [CP000446]
2350019
2350109
+
Ser
TGA
[Ensembl]
¡û
>C022443
CP000444
Gammaproteobacteria
Shewanella sp. MR-7 [CP000444]
1897331
1897421
+
Ser
TGA
[Ensembl]
¡û
>C022444
CP000444
Gammaproteobacteria
Shewanella sp. MR-7 [CP000444]
1898054
1898144
+
Ser
TGA
[Ensembl]
¡û
>C022481
CP000444
Gammaproteobacteria
Shewanella sp. MR-7 [CP000444]
2365643
2365553
-
Ser
TGA
[Ensembl]
¡û
>C022547
CP000503
Gammaproteobacteria
Shewanella sp. W3-18-1 [CP000503]
2328430
2328520
+
Ser
TGA
[Ensembl]
¡û
>C022582
CP000503
Gammaproteobacteria
Shewanella sp. W3-18-1 [CP000503]
2751514
2751424
-
Ser
TGA
[Ensembl]
¡û
>C022583
CP000503
Gammaproteobacteria
Shewanella sp. W3-18-1 [CP000503]
2751079
2750989
-
Ser
TGA
[Ensembl]
¡û
>C022931
AE014299
Gammaproteobacteria
Shewanella oneidensis MR-1 [AE014299]
1950041
1950131
+
Ser
TGA
[Ensembl]
¡û
>C022932
AE014299
Gammaproteobacteria
Shewanella oneidensis MR-1 [AE014299]
1951113
1951203
+
Ser
TGA
[Ensembl]
¡û
>C022998
AE014299
Gammaproteobacteria
Shewanella oneidensis MR-1 [AE014299]
2477660
2477570
-
Ser
TGA
[Ensembl]
¡û
>C023242
CP000681
Gammaproteobacteria
Shewanella putrefaciens [CP000681]
1868188
1868278
+
Ser
TGA
[Ensembl]
¡û
>C023243
CP000681
Gammaproteobacteria
Shewanella putrefaciens [CP000681]
1868623
1868713
+
Ser
TGA
[Ensembl]
¡û
>C023311
CP000681
Gammaproteobacteria
Shewanella putrefaciens [CP000681]
2285047
2284957
-
Ser
TGA
[Ensembl]
¡û
>w026346
ABAU01000105
Gammaproteobacteria
Shewanella baltica OS223 [ABAU]
4926
5018
+
Ser
TGA
[ENA]
¡û
>w026345
ABAU01000105
Gammaproteobacteria
Shewanella baltica OS223 [ABAU]
4283
4375
+
Ser
TGA
[ENA]
¡û
>w026344
ABAU01000105
Gammaproteobacteria
Shewanella baltica OS223 [ABAU]
1635
1727
+
Ser
TGA
[ENA]
¡û
>w026331
ABAU01000073
Gammaproteobacteria
Shewanella baltica OS223 [ABAU]
2838
2930
+
Ser
TGA
[ENA]
¡û
>w024937
AAZC01000093
Gammaproteobacteria
Shewanella baltica OS185 [AAZC]
1682
1590
-
Ser
TGA
[ENA]
¡û
>w024936
AAZC01000093
Gammaproteobacteria
Shewanella baltica OS185 [AAZC]
2305
2213
-
Ser
TGA
[ENA]
¡û
>w024935
AAZC01000093
Gammaproteobacteria
Shewanella baltica OS185 [AAZC]
6599
6512
-
Ser
TGA
[ENA]
¡û
>w024899
AAZC01000044
Gammaproteobacteria
Shewanella baltica OS185 [AAZC]
34762
34670
-
Ser
TGA
[ENA]
¡û
>w022926
AAWY01000081
Gammaproteobacteria
Shewanella putrefaciens 200 [AAWY]
1642
1550
-
Ser
TGA
[ENA]
¡û
>w022870
AAWY01000016
Gammaproteobacteria
Shewanella putrefaciens 200 [AAWY]
42385
42477
+
Ser
TGA
[ENA]
¡û
>w022869
AAWY01000016
Gammaproteobacteria
Shewanella putrefaciens 200 [AAWY]
41950
42042
+
Ser
TGA
[ENA]
¡û
>w018688
AATK01000133
Gammaproteobacteria
Shewanella baltica OS195 [AATK]
2636
2728
+
Ser
TGA
[ENA]
¡û
>w018687
AATK01000111
Gammaproteobacteria
Shewanella baltica OS195 [AATK]
2264
2356
+
Ser
TGA
[ENA]
¡û
>w018686
AATK01000111
Gammaproteobacteria
Shewanella baltica OS195 [AATK]
1618
1710
+
Ser
TGA
[ENA]
¡û
>w018650
AATK01000060
Gammaproteobacteria
Shewanella baltica OS195 [AATK]
2983
3075
+
Ser
TGA
[ENA]
¡û
>WENV180310936
OBJT01060573
[OBJT] soil metagenome; soil
205
115
-
Ser
TGA
[ENA]
¢þ
>W141171190
AXZL01000045
Gammaproteobacteria
Shewanella decolorationis S12 [AXZL]
9863
9953
+
Ser
TGA
[ENA]
¡û
>W141171191
AXZL01000045
Gammaproteobacteria
Shewanella decolorationis S12 [AXZL]
10592
10682
+
Ser
TGA
[ENA]
¡û
>C08008683
CP000753
Gammaproteobacteria
Shewanella baltica OS185 [CP000753]
3107616
3107529
-
Ser
TGA
[Ensembl]
¡û
>C08008684
CP000753
Gammaproteobacteria
Shewanella baltica OS185 [CP000753]
3103321
3103234
-
Ser
TGA
[Ensembl]
¡û
>C08008685
CP000753
Gammaproteobacteria
Shewanella baltica OS185 [CP000753]
3102698
3102611
-
Ser
TGA
[Ensembl]
¡û
>C08008691
CP000753
Gammaproteobacteria
Shewanella baltica OS185 [CP000753]
2629605
2629518
-
Ser
TGA
[Ensembl]
¡û
>W141227884
BALN01000003
Gammaproteobacteria
Shewanella putrefaciens JCM 20190 [BALN]
85899
85809
-
Ser
TGA
[ENA]
¡û
>W141227929
BALN01000032
Gammaproteobacteria
Shewanella putrefaciens JCM 20190 [BALN]
4300
4210
-
Ser
TGA
[ENA]
¡û
>W141227930
BALN01000032
Gammaproteobacteria
Shewanella putrefaciens JCM 20190 [BALN]
3865
3775
-
Ser
TGA
[ENA]
¡û
>C08008787
CP000891
Gammaproteobacteria
Shewanella baltica OS195 [CP000891]
3181478
3181391
-
Ser
TGA
[Ensembl]
¡û
>C08008788
CP000891
Gammaproteobacteria
Shewanella baltica OS195 [CP000891]
3178640
3178553
-
Ser
TGA
[Ensembl]
¡û
>C08008789
CP000891
Gammaproteobacteria
Shewanella baltica OS195 [CP000891]
3177994
3177907
-
Ser
TGA
[Ensembl]
¡û
>C08008795
CP000891
Gammaproteobacteria
Shewanella baltica OS195 [CP000891]
2731272
2731185
-
Ser
TGA
[Ensembl]
¡û
>W141277679
JAEU01000002
Gammaproteobacteria
Shewanella putrefaciens HRCR-6 [JAEU]
9623
9712
+
Ser
TGA
[ENA]
¡û
>W141277681
JAEU01000003
Gammaproteobacteria
Shewanella putrefaciens HRCR-6 [JAEU]
2597
2687
+
Ser
TGA
[ENA]
¡û
>W141277682
JAEU01000003
Gammaproteobacteria
Shewanella putrefaciens HRCR-6 [JAEU]
3345
3435
+
Ser
TGA
[ENA]
¡û
>W141277689
JAEU01000006
Gammaproteobacteria
Shewanella putrefaciens HRCR-6 [JAEU]
370608
370698
+
Ser
TGA
[ENA]
¡û
>ENV08001567
ABNJ01011845
mosquito metagenome; viral fraction from mixed species mosquitoes collected at Buena Vista Lagoon in Oceanside, CA
92
2
-
Ser
TGA
[ENA]
¡û
>ENV08001569
ABNJ01014397
mosquito metagenome; viral fraction from mixed species mosquitoes collected at Buena Vista Lagoon in Oceanside, CA
108
18
-
Ser
TGA
[ENA]
¡û
>ENV08001576
ABNJ01024515
mosquito metagenome; viral fraction from mixed species mosquitoes collected at Buena Vista Lagoon in Oceanside, CA
109
19
-
Ser
TGA
[ENA]
¡û
>WENV020713
AACY020557501
Marine microbial communities from Global Ocean Sampling (GOS)
3888
3796
-
Ser
TGA
[ENA]
>WENV020714
AACY020557501
Marine microbial communities from Global Ocean Sampling (GOS)
4933
4841
-
Ser
TGA
[ENA]
>WENV020871
AACY020560048
Marine microbial communities from Global Ocean Sampling (GOS)
27668
27760
+
Ser
TGA
[ENA]
>WENV020880
AACY020560156
Marine microbial communities from Global Ocean Sampling (GOS)
6778
6686
-
Ser
TGA
[ENA]
>C181016871
CP015194
Gammaproteobacteria
Shewanella sp. Pdp11 [CP015194]
3500029
3499939
-
Ser
TGA
-
¡û
>C181016872
CP015194
Gammaproteobacteria
Shewanella sp. Pdp11 [CP015194]
3497382
3497292
-
Ser
TGA
-
¡û
>C181016873
CP015194
Gammaproteobacteria
Shewanella sp. Pdp11 [CP015194]
3496901
3496811
-
Ser
TGA
-
¡û
>C181016879
CP015194
Gammaproteobacteria
Shewanella sp. Pdp11 [CP015194]
3026449
3026359
-
Ser
TGA
-
¡û
>C181057592
CP022089
Gammaproteobacteria
Shewanella sp. FDAARGOS_354 [CP022089]
1536280
1536190
-
Ser
TGA
-
¡û
>C181057593
CP022089
Gammaproteobacteria
Shewanella sp. FDAARGOS_354 [CP022089]
1535715
1535625
-
Ser
TGA
-
¡û
>C181057600
CP022089
Gammaproteobacteria
Shewanella sp. FDAARGOS_354 [CP022089]
1024761
1024671
-
Ser
TGA
-
¡û
>C181063014
CP022358
Gammaproteobacteria
Shewanella bicestrii JAB-1 [CP022358]
2921255
2921165
-
Ser
TGA
-
¡û
>C181063015
CP022358
Gammaproteobacteria
Shewanella bicestrii JAB-1 [CP022358]
2920370
2920280
-
Ser
TGA
-
¡û
>C181063021
CP022358
Gammaproteobacteria
Shewanella bicestrii JAB-1 [CP022358]
2375746
2375656
-
Ser
TGA
-
¡û
>C181075032
CP023019
Gammaproteobacteria
Shewanella sp. WE21 [CP023019]
3953633
3953723
+
Ser
TGA
-
¡û
>C181075033
CP023019
Gammaproteobacteria
Shewanella sp. WE21 [CP023019]
3956445
3956535
+
Ser
TGA
-
¡û
>C181075034
CP023019
Gammaproteobacteria
Shewanella sp. WE21 [CP023019]
3956726
3956816
+
Ser
TGA
-
¡û
>C181075057
CP023019
Gammaproteobacteria
Shewanella sp. WE21 [CP023019]
4450924
4450834
-
Ser
TGA
-
¡û
>C181164508
CP028355
Gammaproteobacteria
Shewanella baltica CW2 [CP028355]
3866755
3866845
+
Ser
TGA
-
¡û
>C181164509
CP028355
Gammaproteobacteria
Shewanella baltica CW2 [CP028355]
3869776
3869866
+
Ser
TGA
-
¡û
>C181164510
CP028355
Gammaproteobacteria
Shewanella baltica CW2 [CP028355]
3870434
3870524
+
Ser
TGA
-
¡û
>C181164530
CP028355
Gammaproteobacteria
Shewanella baltica CW2 [CP028355]
4281294
4281204
-
Ser
TGA
-
¡û
>C181165378
CP028435
Gammaproteobacteria
Shewanella putrefaciens WS13 [CP028435]
416595
416685
+
Ser
TGA
-
¡û
>C181165462
CP028435
Gammaproteobacteria
Shewanella putrefaciens WS13 [CP028435]
814063
813973
-
Ser
TGA
-
¡û
>C181165463
CP028435
Gammaproteobacteria
Shewanella putrefaciens WS13 [CP028435]
813628
813538
-
Ser
TGA
-
¡û
>C181167949
CP028730
Gammaproteobacteria
Shewanella baltica 128 [CP028730]
2857194
2857104
-
Ser
TGA
-
¡û
>C181167950
CP028730
Gammaproteobacteria
Shewanella baltica 128 [CP028730]
2854262
2854172
-
Ser
TGA
-
¡û
>C181167951
CP028730
Gammaproteobacteria
Shewanella baltica 128 [CP028730]
2852661
2852571
-
Ser
TGA
-
¡û
>C181167957
CP028730
Gammaproteobacteria
Shewanella baltica 128 [CP028730]
2405511
2405421
-
Ser
TGA
-
¡û
>C191017580
CP020373
Gammaproteobacteria
Shewanella khirikhana TH2012 [CP020373]
1452214
1452304
+
Ser
TGA
-
¡û
>C191017581
CP020373
Gammaproteobacteria
Shewanella khirikhana TH2012 [CP020373]
1452703
1452793
+
Ser
TGA
-
¡û
>W141520048
JGVI01000040
Gammaproteobacteria
Shewanella xiamenensis [JGVI]
13959
14049
+
Ser
TGA
[ENA]
¡û
>W141520049
JGVI01000040
Gammaproteobacteria
Shewanella xiamenensis [JGVI]
14524
14614
+
Ser
TGA
[ENA]
¡û
>W141520067
JGVI01000059
Gammaproteobacteria
Shewanella xiamenensis [JGVI]
169328
169418
+
Ser
TGA
[ENA]
¡û
>W09102855
AAIN01000079
Gammaproteobacteria
Shewanella amazonensis SB2B [AAIN]
169
259
+
Ser
TGA
[ENA]
¡û
>W09102901
AAIO01000052
Gammaproteobacteria
Shewanella baltica OS155 [AAIO]
2772
2862
+
Ser
TGA
[ENA]
¡û
>W09102908
AAIO01000111
Gammaproteobacteria
Shewanella baltica OS155 [AAIO]
1664
1754
+
Ser
TGA
[ENA]
¡û
>W09102909
AAIO01000111
Gammaproteobacteria
Shewanella baltica OS155 [AAIO]
4666
4756
+
Ser
TGA
[ENA]
¡û
>W09102910
AAIO01000111
Gammaproteobacteria
Shewanella baltica OS155 [AAIO]
5310
5400
+
Ser
TGA
[ENA]
¡û
>W09103931
AALB01000037
Gammaproteobacteria
Shewanella putrefaciens CN-32 [AALB]
34844
34934
+
Ser
TGA
[ENA]
¡û
>W09103932
AALB01000037
Gammaproteobacteria
Shewanella putrefaciens CN-32 [AALB]
35279
35369
+
Ser
TGA
[ENA]
¡û
>W09103968
AALB01000078
Gammaproteobacteria
Shewanella putrefaciens CN-32 [AALB]
747
837
+
Ser
TGA
[ENA]
¡û
>W09104089
AALH01000082
Gammaproteobacteria
Shewanella sp. ANA-3 [AALH]
6780
6690
-
Ser
TGA
[ENA]
¡û
>W09104095
AALH01000102
Gammaproteobacteria
Shewanella sp. ANA-3 [AALH]
818
908
+
Ser
TGA
[ENA]
¡û
>W09104096
AALH01000102
Gammaproteobacteria
Shewanella sp. ANA-3 [AALH]
1579
1669
+
Ser
TGA
[ENA]
¡û
>W09104279
AALN01000009
Gammaproteobacteria
Shewanella sp. W3-18-1 [AALN]
48369
48279
-
Ser
TGA
[ENA]
¡û
>W09104280
AALN01000009
Gammaproteobacteria
Shewanella sp. W3-18-1 [AALN]
47934
47844
-
Ser
TGA
[ENA]
¡û
>W09104340
AALN01000159
Gammaproteobacteria
Shewanella sp. W3-18-1 [AALN]
5647
5737
+
Ser
TGA
[ENA]
¡û
>W09104583
AALX01000008
Gammaproteobacteria
Shewanella sp. MR-4 [AALX]
29990
30080
+
Ser
TGA
[ENA]
¡û
>W09104584
AALX01000008
Gammaproteobacteria
Shewanella sp. MR-4 [AALX]
30877
30967
+
Ser
TGA
[ENA]
¡û
>W09104635
AALX01000086
Gammaproteobacteria
Shewanella sp. MR-4 [AALX]
2857
2767
-
Ser
TGA
[ENA]
¡û
>C191205245
LR134303
Gammaproteobacteria
Shewanella putrefaciens NCTC12093 [LR134303]
4101694
4101784
+
Ser
TGA
-
¡û
>C191205246
LR134303
Gammaproteobacteria
Shewanella putrefaciens NCTC12093 [LR134303]
4102577
4102667
+
Ser
TGA
-
¡û
>C191205252
LR134303
Gammaproteobacteria
Shewanella putrefaciens NCTC12093 [LR134303]
4698947
4699037
+
Ser
TGA
-
¡û
>C191206434
LR134321
Gammaproteobacteria
Shewanella baltica NCTC10737 [LR134321]
2043125
2043215
+
Ser
TGA
-
¡û
>C191206435
LR134321
Gammaproteobacteria
Shewanella baltica NCTC10737 [LR134321]
2045927
2046017
+
Ser
TGA
-
¡û
>C191206436
LR134321
Gammaproteobacteria
Shewanella baltica NCTC10737 [LR134321]
2046582
2046672
+
Ser
TGA
-
¡û
>C191206442
LR134321
Gammaproteobacteria
Shewanella baltica NCTC10737 [LR134321]
2489173
2489263
+
Ser
TGA
-
¡û
>W143003557
AXZL01000027
Gammaproteobacteria
Shewanella decolorationis S12 [AXZL]
86
-2
-
Ser
TGA
[ENA]
¡û
>C09109169
CP001252
Gammaproteobacteria
Shewanella baltica OS223 [CP001252]
2093977
2094067
+
Ser
TGA
[Ensembl]
¡û
>C09109170
CP001252
Gammaproteobacteria
Shewanella baltica OS223 [CP001252]
2096625
2096715
+
Ser
TGA
[Ensembl]
¡û
>C09109171
CP001252
Gammaproteobacteria
Shewanella baltica OS223 [CP001252]
2097268
2097358
+
Ser
TGA
[Ensembl]
¡û
>C09109177
CP001252
Gammaproteobacteria
Shewanella baltica OS223 [CP001252]
2617333
2617423
+
Ser
TGA
[Ensembl]
¡û
>W1910913747
NHRI01000003
Gammaproteobacteria
Shewanella sp. BC20 [NHRI]
348126
348216
+
Ser
TGA
[ENA]
¡û
>W1910913806
NHRI01000020
Gammaproteobacteria
Shewanella sp. BC20 [NHRI]
29540
29630
+
Ser
TGA
[ENA]
¡û
>W1910913807
NHRI01000020
Gammaproteobacteria
Shewanella sp. BC20 [NHRI]
30322
30412
+
Ser
TGA
[ENA]
¡û
>W1810073367
PEGD01000002
Gammaproteobacteria
Shewanella xiamenensis AS58 [PEGD]
3641197
3641287
+
Ser
TGA
[ENA]
¡û
>W1810073368
PEGD01000002
Gammaproteobacteria
Shewanella xiamenensis AS58 [PEGD]
3641712
3641802
+
Ser
TGA
[ENA]
¡û
>W1810073405
PEGD01000002
Gammaproteobacteria
Shewanella xiamenensis AS58 [PEGD]
3716266
3716176
-
Ser
TGA
[ENA]
¡û
>W1810422970
PYSG01000002
Gammaproteobacteria
Shewanella morhuae CW7 [PYSG]
1110327
1110417
+
Ser
TGA
[ENA]
¡û
>W1810422971
PYSG01000002
Gammaproteobacteria
Shewanella morhuae CW7 [PYSG]
1128033
1128123
+
Ser
TGA
[ENA]
¡û
>W1810422977
PYSG01000002
Gammaproteobacteria
Shewanella morhuae CW7 [PYSG]
1499637
1499727
+
Ser
TGA
[ENA]
¡û
>W1810533071
QCZE01000001
Gammaproteobacteria
Zobellella maritima 102-Py4 [QCZE]
1306587
1306497
-
Ser
TGA
[ENA]
¡û
>W1810533072
QCZE01000001
Gammaproteobacteria
Zobellella maritima 102-Py4 [QCZE]
1300906
1300816
-
Ser
TGA
[ENA]
¡û
>W1810587734
QFLG01000015
Gammaproteobacteria
Shewanella xiamenensis DCB2-1 [QFLG]
62133
62043
-
Ser
TGA
[ENA]
¡û
>W1810587745
QFLG01000026
Gammaproteobacteria
Shewanella xiamenensis DCB2-1 [QFLG]
69229
69319
+
Ser
TGA
[ENA]
¡û
>W1810587746
QFLG01000026
Gammaproteobacteria
Shewanella xiamenensis DCB2-1 [QFLG]
69793
69883
+
Ser
TGA
[ENA]
¡û
>W1810721566
QNSC01000008
Gammaproteobacteria
Shewanella putrefaciens 97 [QNSC]
260149
260239
+
Ser
TGA
[ENA]
¡û
>W1810721582
QNSC01000013
Gammaproteobacteria
Shewanella putrefaciens 97 [QNSC]
35992
35902
-
Ser
TGA
[ENA]
¡û
>W1810721583
QNSC01000013
Gammaproteobacteria
Shewanella putrefaciens 97 [QNSC]
33274
33184
-
Ser
TGA
[ENA]
¡û
>W1810721584
QNSC01000013
Gammaproteobacteria
Shewanella putrefaciens 97 [QNSC]
32527
32437
-
Ser
TGA
[ENA]
¡û
>W10119076
ADVH01000035
Gammaproteobacteria
Shewanella baltica OS678 [ADVH]
47771
47681
-
Ser
TGA
[ENA]
¡û
>W10119077
ADVH01000035
Gammaproteobacteria
Shewanella baltica OS678 [ADVH]
44933
44843
-
Ser
TGA
[ENA]
¡û
>W10119078
ADVH01000035
Gammaproteobacteria
Shewanella baltica OS678 [ADVH]
44287
44197
-
Ser
TGA
[ENA]
¡û
>W10119086
ADVH01000045
Gammaproteobacteria
Shewanella baltica OS678 [ADVH]
4649
4559
-
Ser
TGA
[ENA]
¡û
>W10126014
AECY01000001
Gammaproteobacteria
Shewanella baltica OS183 [AECY]
771612
771522
-
Ser
TGA
[ENA]
¡û
>W10126015
AECY01000001
Gammaproteobacteria
Shewanella baltica OS183 [AECY]
768448
768358
-
Ser
TGA
[ENA]
¡û
>W10126016
AECY01000001
Gammaproteobacteria
Shewanella baltica OS183 [AECY]
767804
767714
-
Ser
TGA
[ENA]
¡û
>W10126022
AECY01000001
Gammaproteobacteria
Shewanella baltica OS183 [AECY]
252638
252548
-
Ser
TGA
[ENA]
¡û
>W10126384
AEDE01000002
Gammaproteobacteria
Shewanella baltica BA175 [AEDE]
537169
537079
-
Ser
TGA
[ENA]
¡û
>W10126385
AEDE01000002
Gammaproteobacteria
Shewanella baltica BA175 [AEDE]
534005
533915
-
Ser
TGA
[ENA]
¡û
>W10126386
AEDE01000002
Gammaproteobacteria
Shewanella baltica BA175 [AEDE]
533361
533271
-
Ser
TGA
[ENA]
¡û
>W10126392
AEDE01000002
Gammaproteobacteria
Shewanella baltica BA175 [AEDE]
18184
18094
-
Ser
TGA
[ENA]
¡û
>C11119402
CP002767
Gammaproteobacteria
Shewanella baltica BA175 [CP002767]
2098951
2099041
+
Ser
TGA
[Ensembl]
¡û
>C11119403
CP002767
Gammaproteobacteria
Shewanella baltica BA175 [CP002767]
2102115
2102205
+
Ser
TGA
[Ensembl]
¡û
>C11119404
CP002767
Gammaproteobacteria
Shewanella baltica BA175 [CP002767]
2102759
2102849
+
Ser
TGA
[Ensembl]
¡û
>C11119410
CP002767
Gammaproteobacteria
Shewanella baltica BA175 [CP002767]
2617937
2618027
+
Ser
TGA
[Ensembl]
¡û
>C11119484
CP002811
Gammaproteobacteria
Shewanella baltica OS117 [CP002811]
2611006
2611096
+
Ser
TGA
[Ensembl]
¡û
>C11119542
CP002811
Gammaproteobacteria
Shewanella baltica OS117 [CP002811]
3103284
3103194
-
Ser
TGA
[Ensembl]
¡û
>C11119543
CP002811
Gammaproteobacteria
Shewanella baltica OS117 [CP002811]
3100282
3100192
-
Ser
TGA
[Ensembl]
¡û
>C11119544
CP002811
Gammaproteobacteria
Shewanella baltica OS117 [CP002811]
3099638
3099548
-
Ser
TGA
[Ensembl]
¡û
>C11119641
CP002383
Gammaproteobacteria
Shewanella baltica OS678 [CP002383]
3130945
3130855
-
Ser
TGA
[Ensembl]
¡û
>C11119642
CP002383
Gammaproteobacteria
Shewanella baltica OS678 [CP002383]
3128107
3128017
-
Ser
TGA
[Ensembl]
¡û
>C11119643
CP002383
Gammaproteobacteria
Shewanella baltica OS678 [CP002383]
3127461
3127371
-
Ser
TGA
[Ensembl]
¡û
>C11119649
CP002383
Gammaproteobacteria
Shewanella baltica OS678 [CP002383]
2680824
2680734
-
Ser
TGA
[Ensembl]
¡û
>W1511403500
JTLE01000038
Gammaproteobacteria
Shewanella sp. ZOR0012 [JTLE]
934
844
-
Ser
TGA
[ENA]
¡û
>W1511403501
JTLE01000038
Gammaproteobacteria
Shewanella sp. ZOR0012 [JTLE]
369
279
-
Ser
TGA
[ENA]
¡û
>C11121513
CP002457
Gammaproteobacteria
Shewanella putrefaciens [CP002457]
1880903
1880993
+
Ser
TGA
[Ensembl]
¡û
>C11121514
CP002457
Gammaproteobacteria
Shewanella putrefaciens [CP002457]
1881338
1881428
+
Ser
TGA
[Ensembl]
¡û
>C11121521
CP002457
Gammaproteobacteria
Shewanella putrefaciens [CP002457]
2290145
2290235
+
Ser
TGA
[Ensembl]
¡û
>W11125248
ADVH01000035
Gammaproteobacteria
Shewanella baltica OS678 [ADVH]
47771
47681
-
Ser
TGA
[ENA]
¡û
>W11125249
ADVH01000035
Gammaproteobacteria
Shewanella baltica OS678 [ADVH]
44933
44843
-
Ser
TGA
[ENA]
¡û
>W11125250
ADVH01000035
Gammaproteobacteria
Shewanella baltica OS678 [ADVH]
44287
44197
-
Ser
TGA
[ENA]
¡û
>W11125258
ADVH01000045
Gammaproteobacteria
Shewanella baltica OS678 [ADVH]
4649
4559
-
Ser
TGA
[ENA]
¡û
>W11133275
AECY01000001
Gammaproteobacteria
Shewanella baltica OS183 [AECY]
771612
771522
-
Ser
TGA
[ENA]
¡û
>W11133276
AECY01000001
Gammaproteobacteria
Shewanella baltica OS183 [AECY]
768448
768358
-
Ser
TGA
[ENA]
¡û
>W11133277
AECY01000001
Gammaproteobacteria
Shewanella baltica OS183 [AECY]
767804
767714
-
Ser
TGA
[ENA]
¡û
>W11133283
AECY01000001
Gammaproteobacteria
Shewanella baltica OS183 [AECY]
252638
252548
-
Ser
TGA
[ENA]
¡û
>W11133645
AEDE01000002
Gammaproteobacteria
Shewanella baltica BA175 [AEDE]
537169
537079
-
Ser
TGA
[ENA]
¡û
>W11133646
AEDE01000002
Gammaproteobacteria
Shewanella baltica BA175 [AEDE]
534005
533915
-
Ser
TGA
[ENA]
¡û
>W11133647
AEDE01000002
Gammaproteobacteria
Shewanella baltica BA175 [AEDE]
533361
533271
-
Ser
TGA
[ENA]
¡û
>W11133653
AEDE01000002
Gammaproteobacteria
Shewanella baltica BA175 [AEDE]
18184
18094
-
Ser
TGA
[ENA]
¡û
>W11169890
AFOZ01000019
Gammaproteobacteria
Shewanella sp. HN-41 [AFOZ]
131486
131576
+
Ser
TGA
[ENA]
¡û
>W11169894
AFOZ01000022
Gammaproteobacteria
Shewanella sp. HN-41 [AFOZ]
15800
15710
-
Ser
TGA
[ENA]
¡û
>W11169910
AFOZ01000029
Gammaproteobacteria
Shewanella sp. HN-41 [AFOZ]
11339
11249
-
Ser
TGA
[ENA]
¡û
>W11178453
AGEX01000006
Gammaproteobacteria
Shewanella baltica OS625 [AGEX]
77611
77701
+
Ser
TGA
[ENA]
¡û
>W11178454
AGEX01000006
Gammaproteobacteria
Shewanella baltica OS625 [AGEX]
80449
80539
+
Ser
TGA
[ENA]
¡û
>W11178455
AGEX01000006
Gammaproteobacteria
Shewanella baltica OS625 [AGEX]
81143
81233
+
Ser
TGA
[ENA]
¡û
>W11178498
AGEX01000018
Gammaproteobacteria
Shewanella baltica OS625 [AGEX]
22901
22991
+
Ser
TGA
[ENA]
¡û
>W121103320
AKZL01000031
Gammaproteobacteria
Shewanella sp. POL2 [AKZL]
3437
3347
-
Ser
TGA
[ENA]
¡û
>W121103343
AKZL01000136
Gammaproteobacteria
Shewanella sp. POL2 [AKZL]
4929
4839
-
Ser
TGA
[ENA]
¡û
>W121103344
AKZL01000136
Gammaproteobacteria
Shewanella sp. POL2 [AKZL]
4365
4275
-
Ser
TGA
[ENA]
¡û
>W1610072089
BCUO01000011
Gammaproteobacteria
Shewanella putrefaciens JCM 20190 = NBRC 3908 [BCUO]
117829
117739
-
Ser
TGA
[ENA]
¡û
>W1610072090
BCUO01000011
Gammaproteobacteria
Shewanella putrefaciens JCM 20190 = NBRC 3908 [BCUO]
117394
117304
-
Ser
TGA
[ENA]
¡û
>W1610072115
BCUO01000028
Gammaproteobacteria
Shewanella putrefaciens JCM 20190 = NBRC 3908 [BCUO]
195
105
-
Ser
TGA
[ENA]
¡û
>W1610617837
LGYY01000097
Gammaproteobacteria
Shewanella sp. Sh95 [LGYY]
11582
11492
-
Ser
TGA
[ENA]
¡û
>W1610617880
LGYY01000203
Gammaproteobacteria
Shewanella sp. Sh95 [LGYY]
10319
10409
+
Ser
TGA
[ENA]
¡û
>W1610617881
LGYY01000203
Gammaproteobacteria
Shewanella sp. Sh95 [LGYY]
10883
10973
+
Ser
TGA
[ENA]
¡û
>W1610982613
LWED01000016
Gammaproteobacteria
Shewanella baltica [LWED]
85247
85337
+
Ser
TGA
[ENA]
¡û
>W1610982619
LWED01000017
Gammaproteobacteria
Shewanella baltica [LWED]
3548
3458
-
Ser
TGA
[ENA]
¡û
>W1610982620
LWED01000017
Gammaproteobacteria
Shewanella baltica [LWED]
714
624
-
Ser
TGA
[ENA]
¡û
>W1610982621
LWED01000017
Gammaproteobacteria
Shewanella baltica [LWED]
92
2
-
Ser
TGA
[ENA]
¡û
>W1610982667
LWED01000067
Gammaproteobacteria
Shewanella baltica [LWED]
4232
4142
-
Ser
TGA
[ENA]
¡û
>W1710069291
BCUO01000011
Gammaproteobacteria
Shewanella putrefaciens JCM 20190 = NBRC 3908 [BCUO]
117829
117739
-
Ser
TGA
[ENA]
¡û
>W1710069292
BCUO01000011
Gammaproteobacteria
Shewanella putrefaciens JCM 20190 = NBRC 3908 [BCUO]
117394
117304
-
Ser
TGA
[ENA]
¡û
>W1710069317
BCUO01000028
Gammaproteobacteria
Shewanella putrefaciens JCM 20190 = NBRC 3908 [BCUO]
195
105
-
Ser
TGA
[ENA]
¡û
>W1710597962
FTNN01000019
Gammaproteobacteria
Shewanella morhuae [FTNN]
18862
18952
+
Ser
TGA
[ENA]
¡û
>W1710597967
FTNN01000022
Gammaproteobacteria
Shewanella morhuae [FTNN]
36023
36113
+
Ser
TGA
[ENA]
¡û
>W1710597968
FTNN01000026
Gammaproteobacteria
Shewanella morhuae [FTNN]
9634
9724
+
Ser
TGA
[ENA]
¡û
>W1710692481
JZWJ01000130
Gammaproteobacteria
Shewanella xiamenensis [JZWJ]
44317
44227
-
Ser
TGA
[ENA]
¡û
>W1710692482
JZWJ01000130
Gammaproteobacteria
Shewanella xiamenensis [JZWJ]
43753
43663
-
Ser
TGA
[ENA]
¡û
>W1710692519
JZWJ01000193
Gammaproteobacteria
Shewanella xiamenensis [JZWJ]
10870
10780
-
Ser
TGA
[ENA]
¡û
>W1710706621
LDOA01000001
Gammaproteobacteria
Shewanella xiamenensis [LDOA]
3705273
3705363
+
Ser
TGA
[ENA]
¡û
>W1710706622
LDOA01000001
Gammaproteobacteria
Shewanella xiamenensis [LDOA]
3705837
3705927
+
Ser
TGA
[ENA]
¡û
>W1710706667
LDOA01000001
Gammaproteobacteria
Shewanella xiamenensis [LDOA]
4234957
4234867
-
Ser
TGA
[ENA]
¡û
>W1710744012
LGYY01000097
Gammaproteobacteria
Shewanella sp. Sh95 [LGYY]
11582
11492
-
Ser
TGA
[ENA]
¡û
>W1710744055
LGYY01000203
Gammaproteobacteria
Shewanella sp. Sh95 [LGYY]
10319
10409
+
Ser
TGA
[ENA]
¡û
>W1710744056
LGYY01000203
Gammaproteobacteria
Shewanella sp. Sh95 [LGYY]
10883
10973
+
Ser
TGA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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