tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.243803 (115 seq.)
>W1710868115 LMIV01000001 Alphaproteobacteria Sphingomonas sp. Root241 [LMIV] 1647017 1646942 - Met CAT [ENA] ¡û
>W1710869800 LMJZ01000024 Alphaproteobacteria Sphingomonas sp. Leaf5 [LMJZ] 187426 187501 + Met CAT [ENA] ¡û
>W1710870021 LMKE01000006 Alphaproteobacteria Sphingomonas sp. Leaf10 [LMKE] 48097 48022 - Met CAT [ENA] ¡û
>W1710870712 LMKS01000022 Alphaproteobacteria Sphingomonas sp. Leaf24 [LMKS] 187426 187501 + Met CAT [ENA] ¡û
>W1710871009 LMKY01000010 Alphaproteobacteria Sphingomonas sp. Leaf29 [LMKY] 156530 156455 - Met CAT [ENA] ¡û
>W1710871926 LMLP01000001 Alphaproteobacteria Sphingomonas sp. Leaf67 [LMLP] 385647 385572 - Met CAT [ENA] ¡û
>W1710913027 LNSC01000048 Alphaproteobacteria Sphingopyxis sp. HXXIV [LNSC] 16850 16775 - Met CAT [ENA] ¡û
>W1710913079 LNSD01000015 Alphaproteobacteria Sphingopyxis sp. H057 [LNSD] 82782 82857 + Met CAT [ENA] ¡û
>W1710997865 LQCK02000001 Alphaproteobacteria Sphingomonas melonis TY [LQCK] 346911 346836 - Met CAT [ENA] ¡û
>W1711009256 LQQO01000045 Alphaproteobacteria Sphingomonas hankookensis [LQQO] 41784 41709 - Met CAT [ENA] ¡û
>W1711127873 LURB01000010 Alphaproteobacteria Sphingopyxis sp. REDSEA-S23_B6 [LURB] 21486 21561 + Met CAT [ENA] ¡û
>W1711146782 LVJD01000264 Alphaproteobacteria Sphingobium yanoikuyae [LVJD] 14353 14428 + Met CAT [ENA] ¡û
>W1711227825 LXVY01000012 Alphaproteobacteria Sphingomonas sp. TDK1 [LXVY] 17812 17737 - Met CAT [ENA] ¡û
>W1711386977 MEGC01000004 Alphaproteobacteria Novosphingobium sp. SCN 63-17 [MEGC] 41766 41841 + Met CAT [ENA] ¡û
>W1712105826 NISK01000003 Alphaproteobacteria Sphingopyxis bauzanensis [NISK] 321635 321710 + Met CAT [ENA] ¡û
>W131002980 AGZU01000005 Alphaproteobacteria Sphingobium yanoikuyae ATCC 51230 [AGZU] 308816 308741 - Met CAT [ENA] ¡û
>W131196360 ASTG01000013 Alphaproteobacteria Sphingobium bisphenolivorans YL23 [ASTG] 78390 78315 - Met CAT [ENA] ¡û
>C019756 CP000356 Alphaproteobacteria Sphingopyxis alaskensis RB2256 [CP000356] 1343549 1343474 - Met CAT [Ensembl] ¡û
>C024968 CP000699 Alphaproteobacteria Rhizorhabdus wittichii RW1 [CP000699] 5028397 5028472 + Met CAT [Ensembl] ¡û
>C171030400 CP014168 Alphaproteobacteria Sphingomonas panacis DCY99 [CP014168] 3968336 3968261 - Met CAT - ¡û
>C171075864 CP018221 Alphaproteobacteria Tardibacter chloracetimidivorans JJ-A5 [CP018221] 200928 201003 + Met CAT - ¡û
>C171094554 CP019449 Alphaproteobacteria Sphingopyxis sp. QXT-31 [CP019449] 1072163 1072238 + Met CAT - ¡û
>C171128434 LT598653 Alphaproteobacteria uncultured Sphingopyxis sp. [LT598653] 2133333 2133258 - Met CAT - ¡û
>WENV180298067 OBJA01159285 [OBJA] soil metagenome; sediment, water from around vicinity 60 135 + Ile2 CAT [ENA] ¢þ
>WENV181167248 OEIU01015637 [OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 1633 1708 + Ile2 CAT [ENA] ¢þ
>WENV181370915 OFQU01000481 [OFQU] wastewater metagenome; Exp Tend CN 90WW 7773 7698 - Ile2 CAT [ENA] ¢þ
>WENV181385354 OFRI01071945 [OFRI] wastewater metagenome; Exp Tend VB 90WW 521 596 + Ile2 CAT [ENA] ¢þ
>WENV181401347 OFTX01000024 [OFTX] sludge metagenome; sludge 39905 39830 - Ile2 CAT [ENA] ¢þ
>WENV181402230 OFTY01000274 [OFTY] sludge metagenome; sludge 22221 22146 - Ile2 CAT [ENA] ¢þ
>WENV181402342 OFTY01000723 [OFTY] sludge metagenome; sludge 12138 12063 - Ile2 CAT [ENA] ¢þ
>W141237824 BBJS01000014 Alphaproteobacteria Sphingomonas paucimobilis NBRC 13935 [BBJS] 211013 211088 + Met CAT [ENA] ¡û
>WENV183727449 PJTP01000002 [PJTP] soil metagenome; Soil (3) enriched on wood chips: alkali lignin treatment 280061 280136 + Ile2 CAT [ENA] ¢þ
>WENV183727938 PJTP01007774 [PJTP] soil metagenome; Soil (3) enriched on wood chips: alkali lignin treatment 642 567 - Ile2 CAT [ENA] ¢þ
>WENV183732580 PJTX01002717 [PJTX] soil metagenome; Soil enriched (2) on filter paper: beechwood xylan treatment 205 280 + Ile2 CAT [ENA] ¢þ
>WENV183732967 PJTY01000009 [PJTY] soil metagenome; Soil enriched (2) on filter paper: alkali lignin treatment 358331 358406 + Ile2 CAT [ENA] ¢þ
>WENV183749753 PPFU01209249 [PPFU] hypolithon metagenome; Antarctic Hypolithon 1735 1660 - Ile2 CAT [ENA] ¢þ
>WENV170011208 APMI01049951 [APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater 536 461 - Met CAT [ENA] ¢þ
>WENV170012071 APMI01116839 [APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater 603 528 - Met CAT [ENA] ¢þ
>WENV170229954 CEQG01249814 [CEQG] marine metagenome genome assembly TARA_076_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 857 932 + Met CAT [ENA] ¢þ
>WENV170232963 CEQI01173106 [CEQI] marine metagenome genome assembly TARA_076_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 639 714 + Met CAT [ENA] ¢þ
>WENV170265459 CERD01186251 [CERD] marine metagenome genome assembly TARA_070_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 102 27 - Met CAT [ENA] ¢þ
>WENV170377745 CETU01204423 [CETU] marine metagenome genome assembly TARA_142_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 450 375 - Met CAT [ENA] ¢þ
>WENV170594834 FUFK011497286 [FUFK] metagenome; unknown 237 162 - Met CAT [ENA] ¢þ
>WENV170653274 JRYI01042384 [JRYI] activated sludge metagenome; activated biomass in a lab-scale reactor treating industrial wastewater at 1 ppm DO 208 283 + Met CAT [ENA] ¢þ
>WENV170709317 LNFM01000257 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 89574 89649 + Met CAT [ENA] ¢þ
>WENV170711717 LNFM01006724 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 1165 1091 - Met CAT [ENA] ¢þ
>WENV170712570 LNFM01015001 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 17871 17945 + Met CAT [ENA] ¢þ
>WENV170759519 LUMT01000002 [LUMT] marine metagenome; Red Sea water column Station 192 - depth 50m 1006260 1006185 - Met CAT [ENA] ¢þ
>WENV170761494 LUMV01000626 [LUMV] marine metagenome; Red Sea water column Station 192 - depth 200m 12861 12786 - Met CAT [ENA] ¢þ
>W141462286 JFHR01000006 Alphaproteobacteria Sphingobium chlorophenolicum [JFHR] 100046 99971 - Met CAT [ENA] ¡û
>WENV170830022 MDSZ01019406 [MDSZ] marine metagenome; seawater 6889 6814 - Met CAT [ENA] ¢þ
>WENV170974374 MTKY01059140 [MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 433 358 - Met CAT [ENA] ¢þ
>WENV170981468 MWVT01101914 [MWVT] soil metagenome; TG5-1 sample; Antarctic (ecotone) soil 160 235 + Met CAT [ENA] ¢þ
>C181003271 AP017655 Alphaproteobacteria Sphingobium cloacae JCM 10874 [AP017655] 862379 862304 - Met CAT - ¡û
>C181108616 CP024923 Alphaproteobacteria Sphingomonas psychrotolerans Cra20 [CP024923] 866562 866637 + Met CAT - ¡û
>C181133087 CP026381 Alphaproteobacteria Sphingopyxis sp. MG [CP026381] 1729759 1729684 - Met CAT - ¡û
>C181186372 CP029985 Alphaproteobacteria Sphingomonas sp. FARSPH [CP029985] 3164969 3165044 + Met CAT - ¡û
>C191000590 AP017898 Alphaproteobacteria Sphingopyxis sp. FD7 [AP017898] 1294564 1294489 - Met CAT - ¡û
>C191004257 AP018711 Alphaproteobacteria Sphingosinicella microcystinivorans B9 [AP018711] 3005624 3005549 - Met CAT - ¡û
>C191146327 CP035765 Alphaproteobacteria Sphingomonas paucimobilis AIMST S2 [CP035765] 825719 825794 + Met CAT - ¡û
>C191163817 CP039250 Alphaproteobacteria Sphingopyxis sp. PAMC25046 [CP039250] 2534289 2534214 - Met CAT - ¡û
>C191185530 CP041016 Alphaproteobacteria Sphingobium fuliginis ATCC 27551 [CP041016, CP041017] 1243267 1243342 + Met CAT - ¡û
>W141713957 JMUB01000063 Alphaproteobacteria Rhizorhabdus wittichii DC-6 [JMUB] 5150 5225 + Met CAT [ENA] ¡û
>W141819159 JQMC01000001 Alphaproteobacteria Rhizorhabdus wittichii [JQMC] 130220 130295 + Met CAT [ENA] ¡û
>W09106536 AAVK01000013 Alphaproteobacteria Rhizorhabdus wittichii RW1 [AAVK] 31654 31729 + Met CAT [ENA] ¡û
>C141006129 CP006644 Alphaproteobacteria Sphingomonas sanxanigenens DSM 19645 = NX02 [CP006644] 3209671 3209596 - Met CAT [Ensembl] ¡û
>W1910501784 FYAT01000017 Alphaproteobacteria Sphingopyxis sp. P1IMeth2 [FYAT] 161577 161652 + Met CAT [ENA] ¡û
>W1910548719 FZOS01000008 Alphaproteobacteria Sphingomonas laterariae LNB2 [FZOS] 145689 145614 - Met CAT [ENA] ¡û
>W1910549100 FZPA01000001 Alphaproteobacteria Sphingopyxis indica DS15 [FZPA] 850098 850023 - Met CAT [ENA] ¡û
>W1910744379 MIAM01000015 Alphaproteobacteria Sphingopyxis sp. RIFCSPHIGHO2_12_FULL_65_19 [MIAM] 30014 30089 + Met CAT [ENA] ¡û
>W1911139261 NOXT01000080 Alphaproteobacteria Sandarakinorhabdus cyanobacteriorum TH057 [NOXT] 37000 37074 + Met CAT [ENA] ¡û
>W1911391066 NWBU01000010 Alphaproteobacteria Sphingomonas oleivorans FW-11 [NWBU] 585555 585630 + Met CAT [ENA] ¡û
>W1911398114 NWMW01000001 Alphaproteobacteria Sphingomonas spermidinifaciens 9NM-10 [NWMW] 729857 729782 - Met CAT [ENA] ¡û
>W1911411904 NWVC01000001 Alphaproteobacteria Sphingomonas adhaesiva DSM 7418 [NWVC] 419428 419354 - Met CAT [ENA] ¡û
>W1911688139 QLJH01000002 Alphaproteobacteria Sphingomonas sp. S-NIH.Pt15_0812 [QLJH] 1967 2042 + Met CAT [ENA] ¡û
>W1911719137 QQWX01000028 Alphaproteobacteria Sphingomonas sp. ABOLF ABOLF S-NIH.Pt19_1214 [QQWX] 12542 12617 + Met CAT [ENA] ¡û
>W1911719238 QQWZ01000064 Alphaproteobacteria Sphingomonas sp. ABOLD ABOLD S-NIH.Pt20_1215 [QQWZ] 186 111 - Met CAT [ENA] ¡û
>W1911722452 QRAL01000039 Alphaproteobacteria Sphingobium yanoikuyae SK-NIH.Env6_1116 [QRAL] 2862 2787 - Met CAT [ENA] ¡û
>W1810000470 BEWI01000031 Alphaproteobacteria Sphingobium fuliginis OMI [BEWI] 839904 839829 - Met CAT [ENA] ¡û
>W1810090346 PGFU01000006 Alphaproteobacteria Sphingomonas carotinifaciens B093034 [PGFU] 182333 182408 + Met CAT [ENA] ¡û
>W1810537934 QDFN01000001 Alphaproteobacteria Sphingomonas sp. TPD3009 [QDFN] 1670389 1670464 + Met CAT [ENA] ¡û
>W1810538308 QDFS01000002 Alphaproteobacteria Sphingomonas melonis TPD3008 [QDFS] 985 910 - Met CAT [ENA] ¡û
>W1810605119 QGNA01000001 Alphaproteobacteria Falsiroseomonas bella CQN31 [QGNA] 473566 473638 + Met CAT [ENA] ¡û
>SRA1014795 SRR023845.317725 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 129 204 + Met CAT [SRA]
>C151051501 CP009452 Alphaproteobacteria Sphingopyxis sp. 113P3 [CP009452] 2019056 2019131 + Met CAT - ¡û
>W1511511950 JXTP01000018 Alphaproteobacteria Sphingomonas melonis 30a [JXTP] 38230 38305 + Met CAT [ENA] ¡û
>W1511592090 LBIC01000003 Alphaproteobacteria Sphingobium chungbukense DJ77 [LBIC] 114352 114427 + Met CAT [ENA] ¡û
>W1511633056 LDES01000074 Alphaproteobacteria Sphingomonas sp. Y57 [LDES] 7790 7715 - Met CAT [ENA] ¡û
>W1511640331 LDUA01000003 Alphaproteobacteria Sphingomonas paucimobilis LCT-SP1 [LDUA] 165449 165374 - Met CAT [ENA] ¡û
>W11167368 AFMP01000057 Alphaproteobacteria Sphingomonas sp. KC8 [AFMP] 6072 6147 + Met CAT [ENA] ¡û
>W11179049 AGFU01000009 Alphaproteobacteria Sphingomonas elodea ATCC 31461 [AGFU] 16949 16874 - Met CAT [ENA] ¡û
>C161043676 CP012700 Alphaproteobacteria Sphingopyxis macrogoltabida EY-1 [CP012700] 1932307 1932232 - Met CAT [Ensembl] ¡û
>C161054551 CP013264 Alphaproteobacteria Sphingobium baderi DE-13 [CP013264] 2875644 2875569 - Met CAT [Ensembl] ¡û
>C161055611 CP013342 Alphaproteobacteria Sphingopyxis terrae subsp. terrae NBRC 15098 203-1 [CP013342] 3236555 3236630 + Met CAT [Ensembl] ¡û
>W1610071363 BCUA01000015 Alphaproteobacteria Sphingopyxis granuli NBRC 100800 [BCUA] 46672 46597 - Met CAT [ENA] ¡û
>W1610072029 BCUN01000023 Alphaproteobacteria Sphingobium amiense NBRC 102518 [BCUN] 37243 37168 - Met CAT [ENA] ¡û
>W1610074520 BCWT01000025 Alphaproteobacteria Sphingomonas adhaesiva NBRC 15099 [BCWT] 22144 22219 + Met CAT [ENA] ¡û
>W1610730461 LMIV01000001 Alphaproteobacteria Sphingomonas sp. Root241 [LMIV] 1647017 1646942 - Met CAT [ENA] ¡û
>W1610732146 LMJZ01000024 Alphaproteobacteria Sphingomonas sp. Leaf5 [LMJZ] 187426 187501 + Met CAT [ENA] ¡û
>W1610732367 LMKE01000006 Alphaproteobacteria Sphingomonas sp. Leaf10 [LMKE] 48097 48022 - Met CAT [ENA] ¡û
>W1610733058 LMKS01000022 Alphaproteobacteria Sphingomonas sp. Leaf24 [LMKS] 187426 187501 + Met CAT [ENA] ¡û
>W1610733355 LMKY01000010 Alphaproteobacteria Sphingomonas sp. Leaf29 [LMKY] 156530 156455 - Met CAT [ENA] ¡û
>W1610734272 LMLP01000001 Alphaproteobacteria Sphingomonas sp. Leaf67 [LMLP] 385647 385572 - Met CAT [ENA] ¡û
>W1610771386 LNSC01000048 Alphaproteobacteria Sphingopyxis sp. HXXIV [LNSC] 16850 16775 - Met CAT [ENA] ¡û
>W1610771438 LNSD01000015 Alphaproteobacteria Sphingopyxis sp. H057 [LNSD] 82782 82857 + Met CAT [ENA] ¡û
>W1610852594 LQCK02000001 Alphaproteobacteria Sphingomonas melonis TY [LQCK] 346911 346836 - Met CAT [ENA] ¡û
>W1610857776 LQQO01000045 Alphaproteobacteria Sphingomonas hankookensis [LQQO] 41784 41709 - Met CAT [ENA] ¡û
>W1610938987 LURB01000010 Alphaproteobacteria Sphingopyxis sp. REDSEA-S23_B6 [LURB] 21486 21561 + Met CAT [ENA] ¡û
>W1611011789 LXVY01000012 Alphaproteobacteria Sphingomonas sp. TDK1 [LXVY] 17812 17737 - Met CAT [ENA] ¡û
>W1710068728 BCUA01000015 Alphaproteobacteria Sphingopyxis granuli NBRC 100800 [BCUA] 46672 46597 - Met CAT [ENA] ¡û
>W1710069231 BCUN01000023 Alphaproteobacteria Sphingobium amiense NBRC 102518 [BCUN] 37243 37168 - Met CAT [ENA] ¡û
>W1710071638 BCWT01000025 Alphaproteobacteria Sphingomonas adhaesiva NBRC 15099 [BCWT] 22144 22219 + Met CAT [ENA] ¡û
>W1710512366 FMZJ01000001 Alphaproteobacteria Sphingomonas sp. YR710 [FMZJ] 388763 388838 + Met CAT [ENA] ¡û
>W1710573601 FOXP01000004 Alphaproteobacteria Sphingomonas rubra [FOXP] 174060 173985 - Met CAT [ENA] ¡û
>W1710592178 FRCG01000009 Alphaproteobacteria Sphingobium sp. YR657 [FRCG] 94235 94310 + Met CAT [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK