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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.278261 (5 seq.)
>C181164675
CP028360
Betaproteobacteria
Candidatus Vidania fulgoroideae OLIH [CP028360]
24030
24102
+
Gln
TTG
-
¡û
>C231533717
CP110500
Unclassified
Candidatus Vidania fulgoroideae [CP110500]
120122
120194
+
Gln
TTG
-
¡û
>C231533746
CP110501
Unclassified
Candidatus Vidania fulgoroideae [CP110501]
5099
5027
-
Gln
TTG
-
¡û
>C231533749
CP110502
Unclassified
Candidatus Vidania fulgoroideae [CP110502]
24033
24105
+
Gln
TTG
-
¡û
>C231533770
CP110503
Unclassified
Candidatus Vidania fulgoroideae [CP110503]
107997
108069
+
Gln
TTG
-
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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