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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.30526 (223 seq.)
>W1710822199
LKUR01000019
Actinomycetota
Bifidobacterium bifidum [LKUR]
104872
104782
-
Ser
GCT
[ENA]
¡û
>W1711048323
LRPO01000033
Actinomycetota
Bifidobacterium bifidum [LRPO]
105152
105062
-
Ser
GCT
[ENA]
¡û
>W1711082558
LSUI01000028
Actinomycetota
Bifidobacterium bifidum [LSUI]
13225
13135
-
Ser
GCT
[ENA]
¡û
>W1711082683
LSUL01000028
Actinomycetota
Bifidobacterium bifidum [LSUL]
16802
16712
-
Ser
GCT
[ENA]
¡û
>W1711577654
MNQA01000001
Actinomycetota
Bifidobacterium sp. 56_9_plus [MNQA]
17116
17206
+
Ser
GCT
[ENA]
¡û
>W1711938042
NAQK01000009
Actinomycetota
Bifidobacterium bifidum [NAQK]
38620
38710
+
Ser
GCT
[ENA]
¡û
>W1711959089
NBYL01000002
Actinomycetota
Bifidobacterium bifidum [NBYL]
275782
275692
-
Ser
GCT
[ENA]
¡û
>W131043437
AMPL01000007
Actinomycetota
Bifidobacterium bifidum LMG 13195 [AMPL]
21344
21434
+
Ser
GCT
[ENA]
¡û
>W131043492
AMPM01000099
Actinomycetota
Bifidobacterium bifidum IPLA 20015 [AMPM]
20952
20862
-
Ser
GCT
[ENA]
¡û
>WENV180128610
OATB01000422
[OATB] human gut metagenome; faeces
15648
15559
-
Ser
GCT
[ENA]
¢þ
>WENV180136542
OATN01000072
[OATN] human gut metagenome; faeces
1042
1131
+
Ser
GCT
[ENA]
¢þ
>WENV180136947
OATO01000034
[OATO] human gut metagenome; faeces
72316
72405
+
Ser
GCT
[ENA]
¢þ
>WENV180141953
OATV01000233
[OATV] human gut metagenome; faeces
19172
19083
-
Ser
GCT
[ENA]
¢þ
>WENV180147191
OAUG01002144
[OAUG] human gut metagenome; faeces
835
746
-
Ser
GCT
[ENA]
¢þ
>WENV180147604
OAUH01000809
[OAUH] human gut metagenome; faeces
12080
11991
-
Ser
GCT
[ENA]
¢þ
>WENV180151979
OAUP01001242
[OAUP] human gut metagenome; faeces
1538
1449
-
Ser
GCT
[ENA]
¢þ
>WENV180153012
OAUR01000178
[OAUR] human gut metagenome; faeces
17614
17525
-
Ser
GCT
[ENA]
¢þ
>WENV180157512
OAUX01000113
[OAUX] human gut metagenome; faeces
1043
1132
+
Ser
GCT
[ENA]
¢þ
>WENV180163064
OAVH01000808
[OAVH] human gut metagenome; faeces
19717
19628
-
Ser
GCT
[ENA]
¢þ
>WENV180163766
OAVI01000472
[OAVI] human gut metagenome; faeces
1044
1133
+
Ser
GCT
[ENA]
¢þ
>WENV180165349
OAVK01000754
[OAVK] human gut metagenome; faeces
1048
1137
+
Ser
GCT
[ENA]
¢þ
>WENV180165791
OAVL01000039
[OAVL] human gut metagenome; faeces
18753
18842
+
Ser
GCT
[ENA]
¢þ
>WENV180171363
OAVW01000294
[OAVW] human gut metagenome; faeces
15646
15557
-
Ser
GCT
[ENA]
¢þ
>WENV180171989
OAVX01000149
[OAVX] human gut metagenome; faeces
16887
16976
+
Ser
GCT
[ENA]
¢þ
>WENV180172891
OAVY01000087
[OAVY] human gut metagenome; faeces
1043
1132
+
Ser
GCT
[ENA]
¢þ
>WENV180173788
OAWA01000801
[OAWA] human gut metagenome; faeces
14329
14240
-
Ser
GCT
[ENA]
¢þ
>WENV180176608
OAWD01000350
[OAWD] human gut metagenome; faeces
15673
15584
-
Ser
GCT
[ENA]
¢þ
>WENV180177263
OAWE01000151
[OAWE] human gut metagenome; faeces
15707
15618
-
Ser
GCT
[ENA]
¢þ
>WENV180184002
OAWR01000171
[OAWR] human gut metagenome; faeces
15693
15604
-
Ser
GCT
[ENA]
¢þ
>WENV180185811
OAWU01000192
[OAWU] human gut metagenome; faeces
1043
1132
+
Ser
GCT
[ENA]
¢þ
>WENV180187900
OAWW01001532
[OAWW] human gut metagenome; faeces
6813
6724
-
Ser
GCT
[ENA]
¢þ
>WENV180188721
OAWX01001071
[OAWX] human gut metagenome; faeces
1033
1122
+
Ser
GCT
[ENA]
¢þ
>WENV180195885
OAZZ01002489
[OAZZ] human gut metagenome; faeces
1027
1116
+
Ser
GCT
[ENA]
¢þ
>WENV180289660
OBIU01000045
[OBIU] human gut metagenome; human gut
77552
77641
+
Ser
GCT
[ENA]
¢þ
>WENV180409345
OBUU01000645
[OBUU] human gut metagenome; faeces
11479
11390
-
Ser
GCT
[ENA]
¢þ
>WENV180412326
OBVA01000703
[OBVA] human gut metagenome; faeces
12056
11967
-
Ser
GCT
[ENA]
¢þ
>WENV180414884
OBVD01000771
[OBVD] human gut metagenome; faeces
12689
12600
-
Ser
GCT
[ENA]
¢þ
>WENV180419375
OBVM01002295
[OBVM] human gut metagenome; faeces
1005
1094
+
Ser
GCT
[ENA]
¢þ
>WENV180420833
OBVP01000102
[OBVP] human gut metagenome; faeces
15699
15610
-
Ser
GCT
[ENA]
¢þ
>WENV180427849
OBWB01000680
[OBWB] human gut metagenome; faeces
12076
11987
-
Ser
GCT
[ENA]
¢þ
>WENV180437313
OBWO01002621
[OBWO] human gut metagenome; faeces
1040
1129
+
Ser
GCT
[ENA]
¢þ
>WENV180438733
OBWS01000584
[OBWS] human gut metagenome; faeces
19092
19003
-
Ser
GCT
[ENA]
¢þ
>WENV180441385
OBWW01000231
[OBWW] human gut metagenome; faeces
39164
39253
+
Ser
GCT
[ENA]
¢þ
>WENV180451329
OBXI01004797
[OBXI] human gut metagenome; faeces
464
553
+
Ser
GCT
[ENA]
¢þ
>WENV180452547
OBXK01000010
[OBXK] human gut metagenome; faeces
79695
79784
+
Ser
GCT
[ENA]
¢þ
>WENV180455174
OBXO01000484
[OBXO] human gut metagenome; faeces
27366
27277
-
Ser
GCT
[ENA]
¢þ
>WENV180459582
OBXX01000631
[OBXX] human gut metagenome; faeces
12096
12007
-
Ser
GCT
[ENA]
¢þ
>WENV180465039
OBYE01000160
[OBYE] human gut metagenome; faeces
12151
12062
-
Ser
GCT
[ENA]
¢þ
>WENV180473650
OBYR01000796
[OBYR] human gut metagenome; faeces
15694
15605
-
Ser
GCT
[ENA]
¢þ
>WENV180475168
OBYU01000214
[OBYU] human gut metagenome; faeces
15711
15622
-
Ser
GCT
[ENA]
¢þ
>WENV180486383
OBZM01000038
[OBZM] human gut metagenome; faeces
38649
38738
+
Ser
GCT
[ENA]
¢þ
>WENV180487580
OBZP01003200
[OBZP] human gut metagenome; faeces
190
101
-
Ser
GCT
[ENA]
¢þ
>WENV180489336
OBZS01000039
[OBZS] human gut metagenome; faeces
59276
59365
+
Ser
GCT
[ENA]
¢þ
>WENV180490460
OBZU01000885
[OBZU] human gut metagenome; faeces
556
645
+
Ser
GCT
[ENA]
¢þ
>WENV180492199
OBZW01000593
[OBZW] human gut metagenome; faeces
17965
17876
-
Ser
GCT
[ENA]
¢þ
>WENV180492694
OBZX01000134
[OBZX] human gut metagenome; faeces
27424
27335
-
Ser
GCT
[ENA]
¢þ
>WENV180493020
OBZY01000107
[OBZY] human gut metagenome; faeces
1030
1119
+
Ser
GCT
[ENA]
¢þ
>WENV180493442
OBZZ01000010
[OBZZ] human gut metagenome; faeces
120479
120390
-
Ser
GCT
[ENA]
¢þ
>WENV180495023
OCAA01003144
[OCAA] human gut metagenome; faeces
3671
3760
+
Ser
GCT
[ENA]
¢þ
>WENV180495656
OCAB01000193
[OCAB] human gut metagenome; faeces
12079
11990
-
Ser
GCT
[ENA]
¢þ
>WENV180497936
OCAF01000148
[OCAF] human gut metagenome; faeces
15658
15569
-
Ser
GCT
[ENA]
¢þ
>WENV180498495
OCAG01000270
[OCAG] human gut metagenome; faeces
49468
49379
-
Ser
GCT
[ENA]
¢þ
>WENV180499262
OCAH01000478
[OCAH] human gut metagenome; faeces
12095
12006
-
Ser
GCT
[ENA]
¢þ
>WENV180500761
OCAJ01000380
[OCAJ] human gut metagenome; faeces
1040
1129
+
Ser
GCT
[ENA]
¢þ
>WENV180501844
OCAK01008294
[OCAK] human gut metagenome; faeces
749
660
-
Ser
GCT
[ENA]
¢þ
>WENV180505084
OCAO01001727
[OCAO] human gut metagenome; faeces
282
371
+
Ser
GCT
[ENA]
¢þ
>WENV180506023
OCAQ01064323
[OCAQ] human gut metagenome; faeces
157
246
+
Ser
GCT
[ENA]
¢þ
>WENV180513065
OCHA01006462
[OCHA] human gut metagenome; human gut
3183
3094
-
Ser
GCT
[ENA]
¢þ
>WENV180596737
OCPI01000524
[OCPI] human gut metagenome; faeces
1033
1122
+
Ser
GCT
[ENA]
¢þ
>WENV180601468
OCPQ01051125
[OCPQ] human gut metagenome; faeces
300
389
+
Ser
GCT
[ENA]
¢þ
>WENV180607209
OCPU01000411
[OCPU] human gut metagenome; human gut
28184
28273
+
Ser
GCT
[ENA]
¢þ
>WENV181133173
OEGE01084594
[OEGE] human metagenome; G_DNA_Stool
221
132
-
Ser
GCT
[ENA]
¢þ
>WENV181187618
OENZ01000044
[OENZ] human gut metagenome; human gut
46341
46252
-
Ser
GCT
[ENA]
¢þ
>WENV181216801
OFCG01000217
[OFCG] metagenome; Human gut stool
18597
18686
+
Ser
GCT
[ENA]
¢þ
>WENV181217679
OFCL01000008
[OFCL] metagenome; Human gut stool
118602
118513
-
Ser
GCT
[ENA]
¢þ
>WENV181218224
OFCM01000045
[OFCM] metagenome; Human gut stool
59985
59896
-
Ser
GCT
[ENA]
¢þ
>WENV181218699
OFCN01000017
[OFCN] metagenome; Human gut stool
68382
68471
+
Ser
GCT
[ENA]
¢þ
>WENV181219545
OFCP01000067
[OFCP] metagenome; Human gut stool
12081
11992
-
Ser
GCT
[ENA]
¢þ
>WENV181221052
OFCU01000054
[OFCU] metagenome; Human gut stool
56929
57018
+
Ser
GCT
[ENA]
¢þ
>WENV181222041
OFDA01000024
[OFDA] metagenome; Human gut stool
68382
68471
+
Ser
GCT
[ENA]
¢þ
>WENV181330942
OFLZ01000214
[OFLZ] human gut metagenome; human gut
20565
20476
-
Ser
GCT
[ENA]
¢þ
>WENV181345423
OFML01000096
[OFML] human gut metagenome; human gut
19462
19373
-
Ser
GCT
[ENA]
¢þ
>WENV181348205
OFMN01000179
[OFMN] human gut metagenome; human gut
60789
60878
+
Ser
GCT
[ENA]
¢þ
>WENV181353282
OFMR01002092
[OFMR] human gut metagenome; human gut
551
640
+
Ser
GCT
[ENA]
¢þ
>WENV181394831
OFRZ01001017
[OFRZ] human gut metagenome; human gut
3104
3193
+
Ser
GCT
[ENA]
¢þ
>W141143976
AWSW01000040
Actinomycetota
Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456 [AWSW]
51645
51735
+
Ser
GCT
[ENA]
¡û
>WENV181470646
OGEU01010302
[OGEU] metagenome; Human gut stool
2200
2289
+
Ser
GCT
[ENA]
¢þ
>WENV181671825
OGON01006748
[OGON] human gut metagenome; faeces
3662
3751
+
Ser
GCT
[ENA]
¢þ
>WENV181673486
OGOO01003816
[OGOO] human gut metagenome; faeces
5619
5530
-
Ser
GCT
[ENA]
¢þ
>WENV181701347
OGPH01000902
[OGPH] human gut metagenome; faeces
4961
5050
+
Ser
GCT
[ENA]
¢þ
>WENV181714435
OGPR01001969
[OGPR] human gut metagenome; faeces
8531
8620
+
Ser
GCT
[ENA]
¢þ
>WENV181723142
OGPW01001876
[OGPW] human gut metagenome; faeces
12095
12006
-
Ser
GCT
[ENA]
¢þ
>W08010153
ABQP01000021
Actinomycetota
Bifidobacterium bifidum NCIMB 41171 [ABQP]
158148
158238
+
Ser
GCT
[ENA]
¡û
>WENV181780946
OGRJ01006311
[OGRJ] human gut metagenome; faeces
1026
1115
+
Ser
GCT
[ENA]
¢þ
>WENV181786320
OGRN01001545
[OGRN] human gut metagenome; faeces
18387
18298
-
Ser
GCT
[ENA]
¢þ
>WENV181789581
OGRO01025117
[OGRO] human gut metagenome; faeces
1405
1494
+
Ser
GCT
[ENA]
¢þ
>WENV181803579
OGSD01024874
[OGSD] human gut metagenome; faeces
1001
1090
+
Ser
GCT
[ENA]
¢þ
>WENV181898769
OGXT01013565
[OGXT] human gut metagenome; faeces
1464
1553
+
Ser
GCT
[ENA]
¢þ
>WENV182394676
OIEJ01000242
[OIEJ] human gut metagenome; human gut
21770
21681
-
Ser
GCT
[ENA]
¢þ
>WENV182400469
OIEQ01000276
[OIEQ] human gut metagenome; human gut
4987
5076
+
Ser
GCT
[ENA]
¢þ
>WENV182401415
OIER01001698
[OIER] human gut metagenome; human gut
3242
3331
+
Ser
GCT
[ENA]
¢þ
>WENV182403576
OIEU01000009
[OIEU] human gut metagenome; human gut
120435
120346
-
Ser
GCT
[ENA]
¢þ
>WENV182624725
OJKO01015108
[OJKO] metagenome; faeces
148
59
-
Ser
GCT
[ENA]
¢þ
>WENV182771551
OJRX01011972
[OJRX] human gut metagenome; human gut
1786
1875
+
Ser
GCT
[ENA]
¢þ
>WENV182781453
OJSE01004410
[OJSE] human gut metagenome; human gut
4232
4321
+
Ser
GCT
[ENA]
¢þ
>WENV182796497
OJSQ01025665
[OJSQ] human gut metagenome; human gut
739
828
+
Ser
GCT
[ENA]
¢þ
>WENV182805096
OJVC01000044
[OJVC] human gut metagenome; human gut
17788
17877
+
Ser
GCT
[ENA]
¢þ
>WENV182805343
OJVE01000069
[OJVE] human gut metagenome; human gut
43486
43575
+
Ser
GCT
[ENA]
¢þ
>WENV182872337
OKRV01004253
[OKRV] human gut metagenome; faeces
3106
3195
+
Ser
GCT
[ENA]
¢þ
>WENV182875431
OKRX01001157
[OKRX] human gut metagenome; faeces
1484
1573
+
Ser
GCT
[ENA]
¢þ
>WENV182947709
OKVN01000023
[OKVN] human gut metagenome; human gut
49053
49142
+
Ser
GCT
[ENA]
¢þ
>WENV182950773
OKVT01000025
[OKVT] human gut metagenome; human gut
105252
105163
-
Ser
GCT
[ENA]
¢þ
>WENV182954040
OKWA01000001
[OKWA] human gut metagenome; human gut
285758
285847
+
Ser
GCT
[ENA]
¢þ
>WENV182981360
OKYW01001876
[OKYW] human gut metagenome; human gut
302
391
+
Ser
GCT
[ENA]
¢þ
>WENV182997058
OLBO01008093
[OLBO] human gut metagenome; human gut
765
854
+
Ser
GCT
[ENA]
¢þ
>WENV183006262
OLDD01013416
[OLDD] human gut metagenome; human gut
371
282
-
Ser
GCT
[ENA]
¢þ
>WENV183006702
OLDF01004135
[OLDF] human gut metagenome; human gut
1511
1422
-
Ser
GCT
[ENA]
¢þ
>WENV183063129
OLIF01002839
[OLIF] metagenome; faeces
1241
1330
+
Ser
GCT
[ENA]
¢þ
>WENV183096393
OLNE01000004
[OLNE] human gut metagenome; faeces
288357
288446
+
Ser
GCT
[ENA]
¢þ
>WENV183100367
OLNG01000002
[OLNG] human gut metagenome; faeces
304848
304937
+
Ser
GCT
[ENA]
¢þ
>WENV183105968
OLNL01001081
[OLNL] human gut metagenome; faeces
22135
22046
-
Ser
GCT
[ENA]
¢þ
>WENV183118907
OLNT01000754
[OLNT] human gut metagenome; faeces
18098
18009
-
Ser
GCT
[ENA]
¢þ
>WENV183125841
OLNY01002299
[OLNY] human gut metagenome; faeces
1516
1605
+
Ser
GCT
[ENA]
¢þ
>WENV183133792
OLOC01000767
[OLOC] human gut metagenome; faeces
3527
3616
+
Ser
GCT
[ENA]
¢þ
>WENV183167121
OLOZ01000003
[OLOZ] human gut metagenome; faeces
46880
46791
-
Ser
GCT
[ENA]
¢þ
>WENV183182191
OLPK01000050
[OLPK] human gut metagenome; faeces
128259
128348
+
Ser
GCT
[ENA]
¢þ
>WENV183187867
OLPP01000003
[OLPP] human gut metagenome; faeces
23042
22953
-
Ser
GCT
[ENA]
¢þ
>WENV183188971
OLPQ01000145
[OLPQ] human gut metagenome; faeces
51329
51418
+
Ser
GCT
[ENA]
¢þ
>WENV183215293
OLQG01000745
[OLQG] human gut metagenome; faeces
7629
7718
+
Ser
GCT
[ENA]
¢þ
>WENV183227435
OLQQ01000003
[OLQQ] human gut metagenome; faeces
13254
13165
-
Ser
GCT
[ENA]
¢þ
>WENV183231396
OLQU01000041
[OLQU] human gut metagenome; faeces
46805
46894
+
Ser
GCT
[ENA]
¢þ
>WENV183244628
OLRE01000206
[OLRE] human gut metagenome; faeces
12668
12579
-
Ser
GCT
[ENA]
¢þ
>WENV183265032
OLRS01001566
[OLRS] human gut metagenome; faeces
11863
11952
+
Ser
GCT
[ENA]
¢þ
>WENV183270391
OLRV01007152
[OLRV] human gut metagenome; faeces
2897
2808
-
Ser
GCT
[ENA]
¢þ
>WENV183297266
OLSM01001747
[OLSM] human gut metagenome; faeces
1532
1621
+
Ser
GCT
[ENA]
¢þ
>WENV183306723
OLTA01001917
[OLTA] human gut metagenome; faeces
460
371
-
Ser
GCT
[ENA]
¢þ
>WENV183306893
OLTD01000015
[OLTD] human gut metagenome; faeces
68487
68398
-
Ser
GCT
[ENA]
¢þ
>WENV183307339
OLTF01000176
[OLTF] human gut metagenome; faeces
101
190
+
Ser
GCT
[ENA]
¢þ
>WENV183308792
OLUI01002322
[OLUI] human gut metagenome; faeces
698
609
-
Ser
GCT
[ENA]
¢þ
>WENV183314101
OLVR01000697
[OLVR] human gut metagenome; faeces
23811
23900
+
Ser
GCT
[ENA]
¢þ
>WENV183329960
OLWB01001968
[OLWB] human gut metagenome; faeces
12623
12534
-
Ser
GCT
[ENA]
¢þ
>WENV183501564
OMGS01000675
[OMGS] human gut metagenome; human gut
10028
10117
+
Ser
GCT
[ENA]
¢þ
>WENV183522530
ONZR01000165
[ONZR] human gut metagenome; human gut
18322
18411
+
Ser
GCT
[ENA]
¢þ
>WENV183523083
ONZS01000027
[ONZS] human gut metagenome; human gut
120102
120013
-
Ser
GCT
[ENA]
¢þ
>WENV183527578
ONZW01000985
[ONZW] human gut metagenome; human gut
12146
12057
-
Ser
GCT
[ENA]
¢þ
>WENV183528615
ONZX01002353
[ONZX] human gut metagenome; human gut
6372
6283
-
Ser
GCT
[ENA]
¢þ
>WENV183559678
OOBT01000374
[OOBT] human gut metagenome; human gut
644
555
-
Ser
GCT
[ENA]
¢þ
>WENV183567103
OOCB01000171
[OOCB] human gut metagenome; human gut
29238
29149
-
Ser
GCT
[ENA]
¢þ
>WENV183575692
OOCI01005499
[OOCI] human gut metagenome; human gut
2989
3078
+
Ser
GCT
[ENA]
¢þ
>WENV183581046
OOCN01001824
[OOCN] human gut metagenome; human gut
8935
8846
-
Ser
GCT
[ENA]
¢þ
>WENV183590695
OOCX01001953
[OOCX] human gut metagenome; human gut
6793
6704
-
Ser
GCT
[ENA]
¢þ
>WENV183602274
OODJ01027511
[OODJ] human gut metagenome; human gut
609
520
-
Ser
GCT
[ENA]
¢þ
>WENV183608320
OODP01005783
[OODP] human gut metagenome; human gut
3127
3038
-
Ser
GCT
[ENA]
¢þ
>WENV183751463
PPYE01013894
[PPYE] human gut metagenome; stool from patient with ulcerative colitis
92
181
+
Ser
GCT
[ENA]
¢þ
>WENV183774794
PPYF01055751
[PPYF] human gut metagenome; stool from patient with Crohn's disease
1193
1104
-
Ser
GCT
[ENA]
¢þ
>WENV183781463
PPYF01196695
[PPYF] human gut metagenome; stool from patient with Crohn's disease
5057
5146
+
Ser
GCT
[ENA]
¢þ
>WENV183782804
PPYF01220037
[PPYF] human gut metagenome; stool from patient with Crohn's disease
13383
13294
-
Ser
GCT
[ENA]
¢þ
>WENV183787648
PPYF01341747
[PPYF] human gut metagenome; stool from patient with Crohn's disease
1027
938
-
Ser
GCT
[ENA]
¢þ
>WENV183790400
PPYF01411290
[PPYF] human gut metagenome; stool from patient with Crohn's disease
104306
104395
+
Ser
GCT
[ENA]
¢þ
>WENV170540255
CWGX01000041
[CWGX] human gut metagenome; ENVO:feces
189816
189906
+
Ser
GCT
[ENA]
¢þ
>C181033254
CP018757
Actinomycetota
Bifidobacterium bifidum PRI 1 [CP018757]
1683328
1683417
+
Ser
GCT
-
¡û
>C181071730
CP022723
Actinomycetota
Bifidobacterium bifidum S6 [CP022723]
570562
570651
+
Ser
GCT
-
¡û
>C191000953
AP018131
Actinomycetota
Bifidobacterium bifidum LMG 13195 JCM 7004 [AP018131]
566413
566324
-
Ser
GCT
-
¡û
>C191000993
AP018132
Actinomycetota
Bifidobacterium bifidum TMC 3115 [AP018132]
1027757
1027668
-
Ser
GCT
-
¡û
>W141523762
JGYO01000001
Actinomycetota
Bifidobacterium bifidum [JGYO]
276925
276835
-
Ser
GCT
[ENA]
¡û
>C191207974
LR134344
Actinomycetota
Bifidobacterium bifidum NCTC13001 [LR134344]
812693
812782
+
Ser
GCT
-
¡û
>W1910873791
NDXI01000004
Actinomycetota
Bifidobacterium bifidum 1 G1971 [NDXI]
77427
77516
+
Ser
GCT
[ENA]
¡û
>W1810541427
QDIH01000017
Actinomycetota
Bifidobacterium bifidum DS33_23 [QDIH]
54675
54586
-
Ser
GCT
[ENA]
¡û
>W1810541483
QDII01000023
Actinomycetota
Bifidobacterium bifidum DS31_23 [QDII]
51102
51191
+
Ser
GCT
[ENA]
¡û
>W1810541526
QDIJ01000002
Actinomycetota
Bifidobacterium bifidum DS30_23 [QDIJ]
259733
259644
-
Ser
GCT
[ENA]
¡û
>W1810541671
QDIM01000023
Actinomycetota
Bifidobacterium bifidum DS26_23 [QDIM]
33373
33462
+
Ser
GCT
[ENA]
¡û
>W1810542199
QDIX01000001
Actinomycetota
Bifidobacterium bifidum DS32_23 [QDIX]
58853
58942
+
Ser
GCT
[ENA]
¡û
>W1810542367
QDJA01000014
Actinomycetota
Bifidobacterium bifidum DS25_23 [QDJA]
105063
104974
-
Ser
GCT
[ENA]
¡û
>W1810792872
QRJI01000001
Actinomycetota
Bifidobacterium bifidum AM18-29 [QRJI]
300132
300221
+
Ser
GCT
[ENA]
¡û
>W1810793079
QRJM01000001
Actinomycetota
Bifidobacterium bifidum AM18-12AC [QRJM]
300421
300510
+
Ser
GCT
[ENA]
¡û
>W1810793127
QRJN01000001
Actinomycetota
Bifidobacterium bifidum AM18-11 [QRJN]
300281
300370
+
Ser
GCT
[ENA]
¡û
>W1810793229
QRJP01000001
Actinomycetota
Bifidobacterium bifidum AM18-1 [QRJP]
300172
300261
+
Ser
GCT
[ENA]
¡û
>W1810795941
QRLK01000003
Actinomycetota
Bifidobacterium bifidum AM12-9 [QRLK]
77574
77663
+
Ser
GCT
[ENA]
¡û
>W1810796332
QRLR01000002
Actinomycetota
Bifidobacterium bifidum AM12-10 [QRLR]
270045
269956
-
Ser
GCT
[ENA]
¡û
>W1810798785
QRNM01000005
Actinomycetota
Bifidobacterium bifidum AF45-10 [QRNM]
45985
45896
-
Ser
GCT
[ENA]
¡û
>W1810814837
QSAO01000007
Actinomycetota
Bifidobacterium bifidum AF11-25B [QSAO]
40814
40725
-
Ser
GCT
[ENA]
¡û
>W1810822327
QSGB01000002
Actinomycetota
Bifidobacterium bifidum AM42-15AC [QSGB]
268193
268104
-
Ser
GCT
[ENA]
¡û
>W1810824918
QSHW01000002
Actinomycetota
Bifidobacterium bifidum AM36-1AC [QSHW]
327357
327446
+
Ser
GCT
[ENA]
¡û
>W1810832028
QSOS01000002
Actinomycetota
Bifidobacterium bifidum TM07-4AC [QSOS]
287566
287655
+
Ser
GCT
[ENA]
¡û
>W1810832420
QSPA01000002
Actinomycetota
Bifidobacterium bifidum TM06-5 [QSPA]
190297
190208
-
Ser
GCT
[ENA]
¡û
>W1810832821
QSPI01000002
Actinomycetota
Bifidobacterium bifidum TM06-10 [QSPI]
191746
191657
-
Ser
GCT
[ENA]
¡û
>W1810833288
QSPQ01000002
Actinomycetota
Bifidobacterium bifidum TM05-15 [QSPQ]
187640
187551
-
Ser
GCT
[ENA]
¡û
>W1810833875
QSQB01000002
Actinomycetota
Bifidobacterium bifidum TM04-12 [QSQB]
287564
287653
+
Ser
GCT
[ENA]
¡û
>W1810834011
QSQE01000001
Actinomycetota
Bifidobacterium bifidum TM02-17 [QSQE]
71411
71500
+
Ser
GCT
[ENA]
¡û
>W1810834063
QSQF01000001
Actinomycetota
Bifidobacterium bifidum TM02-15 [QSQF]
241190
241101
-
Ser
GCT
[ENA]
¡û
>W1810836185
QSRS01000002
Actinomycetota
Bifidobacterium bifidum TF07-22 [QSRS]
232095
232184
+
Ser
GCT
[ENA]
¡û
>W1810836882
QSSD01000001
Actinomycetota
Bifidobacterium bifidum TF06-14AC [QSSD]
300374
300463
+
Ser
GCT
[ENA]
¡û
>W1810836936
QSSE01000001
Actinomycetota
Bifidobacterium bifidum TF06-13 [QSSE]
263962
263873
-
Ser
GCT
[ENA]
¡û
>W1810837182
QSSI01000002
Actinomycetota
Bifidobacterium bifidum TF05-39 [QSSI]
238115
238204
+
Ser
GCT
[ENA]
¡û
>W1810837698
QSSS01000002
Actinomycetota
Bifidobacterium bifidum TF05-1 [QSSS]
37391
37302
-
Ser
GCT
[ENA]
¡û
>C151000233
AP012323
Actinomycetota
Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456 [AP012323]
1860808
1860718
-
Ser
GCT
[Ensembl]
¡û
>C151068327
CP010412
Actinomycetota
Bifidobacterium bifidum BF3 [CP010412]
1922887
1922797
-
Ser
GCT
-
¡û
>C11102305
CP001840
Actinomycetota
Bifidobacterium bifidum PRL2010 [CP001840]
1856544
1856454
-
Ser
GCT
[Ensembl]
¡û
>C11102352
CP002220
Actinomycetota
Bifidobacterium bifidum S17 [CP002220]
1828927
1828837
-
Ser
GCT
[Ensembl]
¡û
>W1511364969
JSDS01000003
Actinomycetota
Bifidobacterium bifidum 156B [JSDS]
125973
125883
-
Ser
GCT
[ENA]
¡û
>W1511365011
JSDT01000001
Actinomycetota
Bifidobacterium bifidum 324B [JSDT]
288698
288788
+
Ser
GCT
[ENA]
¡û
>W1511365063
JSDU01000001
Actinomycetota
Bifidobacterium bifidum 85B [JSDU]
445712
445622
-
Ser
GCT
[ENA]
¡û
>W1511365115
JSDV01000001
Actinomycetota
Bifidobacterium bifidum A8 [JSDV]
260106
260016
-
Ser
GCT
[ENA]
¡û
>W1511365161
JSDW01000002
Actinomycetota
Bifidobacterium bifidum IPLA 20015 [JSDW]
178476
178386
-
Ser
GCT
[ENA]
¡û
>W1511365214
JSDX01000004
Actinomycetota
Bifidobacterium bifidum IPLA 20017 [JSDX]
45814
45724
-
Ser
GCT
[ENA]
¡û
>W1511365258
JSDY01000001
Actinomycetota
Bifidobacterium bifidum LMG 11582 [JSDY]
442642
442552
-
Ser
GCT
[ENA]
¡û
>W1511365311
JSDZ01000002
Actinomycetota
Bifidobacterium bifidum LMG 11583 [JSDZ]
125402
125312
-
Ser
GCT
[ENA]
¡û
>W1511365361
JSEA01000005
Actinomycetota
Bifidobacterium bifidum LMG 13195 [JSEA]
53978
53888
-
Ser
GCT
[ENA]
¡û
>W1511365406
JSEB01000002
Actinomycetota
Bifidobacterium bifidum LMG 13200 [JSEB]
190143
190053
-
Ser
GCT
[ENA]
¡û
>C121001433
CP001361
Actinomycetota
Bifidobacterium bifidum BGN4 [CP001361]
1848880
1848790
-
Ser
GCT
[Ensembl]
¡û
>W121077172
AKCA01000001
Actinomycetota
Bifidobacterium bifidum NCIMB 41171 [AKCA]
1660195
1660105
-
Ser
GCT
[ENA]
¡û
>W1610045686
BBBT01000024
Actinomycetota
Bifidobacterium bifidum JCM 1254 [BBBT]
1553
1643
+
Ser
GCT
[ENA]
¡û
>W1610074707
BCXK01000020
Actinomycetota
Bifidobacterium bifidum [BCXK]
105175
105085
-
Ser
GCT
[ENA]
¡û
>W1610098198
CYXQ01000003
Actinomycetota
Bifidobacterium bifidum [CYXQ]
94132
94222
+
Ser
GCT
[ENA]
¡û
>W1610519773
JDUM01000006
Actinomycetota
Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456 [JDUM]
115894
115804
-
Ser
GCT
[ENA]
¡û
>W1610686258
LKUR01000019
Actinomycetota
Bifidobacterium bifidum [LKUR]
104872
104782
-
Ser
GCT
[ENA]
¡û
>W1610889452
LRPO01000033
Actinomycetota
Bifidobacterium bifidum [LRPO]
105152
105062
-
Ser
GCT
[ENA]
¡û
>W1610921343
LSUI01000028
Actinomycetota
Bifidobacterium bifidum [LSUI]
13225
13135
-
Ser
GCT
[ENA]
¡û
>W1610921468
LSUL01000028
Actinomycetota
Bifidobacterium bifidum [LSUL]
16802
16712
-
Ser
GCT
[ENA]
¡û
>W1710042527
BBBT01000024
Actinomycetota
Bifidobacterium bifidum JCM 1254 [BBBT]
1553
1643
+
Ser
GCT
[ENA]
¡û
>W1710072522
BCXK01000020
Actinomycetota
Bifidobacterium bifidum [BCXK]
105175
105085
-
Ser
GCT
[ENA]
¡û
>W1710100953
CYXQ01000003
Actinomycetota
Bifidobacterium bifidum [CYXQ]
94132
94222
+
Ser
GCT
[ENA]
¡û
>W1710558358
FOLU01000002
Actinomycetota
Bifidobacterium bifidum [FOLU]
38404
38494
+
Ser
GCT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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