tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.328657 (145 seq.)
>W1710808922 LKDZ01000017 Betaproteobacteria Variovorax boronicumulans [LKDZ] 36018 35943 - Val TAC [ENA] ¡û
>W1710859983 LMCN01000003 Betaproteobacteria Rhizobacter sp. Root29 [LMCN] 545379 545454 + Val TAC [ENA] ¡û
>W1710861007 LMDI01000013 Betaproteobacteria Rhizobacter sp. Root1221 [LMDI] 108115 108190 + Val TAC [ENA] ¡û
>W1710861287 LMDM01000023 Betaproteobacteria Rhizobacter sp. Root1238 [LMDM] 310027 310102 + Val TAC [ENA] ¡û
>W1710862472 LMEK01000006 Betaproteobacteria Variovorax sp. Root434 [LMEK] 354076 354151 + Val TAC [ENA] ¡û
>W1710863096 LMEV01000019 Betaproteobacteria Variovorax sp. Root473 [LMEV] 137670 137745 + Val TAC [ENA] ¡û
>W1710870517 LMKO01000025 Betaproteobacteria Xylophilus sp. Leaf220 [LMKO] 59409 59484 + Val TAC [ENA] ¡û
>W1710893614 LNEY01000008 Betaproteobacteria Burkholderiales bacterium Ga0077547 [LNEY] 82824 82899 + Val TAC [ENA] ¡û
>W1711044062 LRMT01000066 Betaproteobacteria Cupriavidus sp. UYMMa02A [LRMT] 39934 39859 - Val TAC [ENA] ¡û
>W1711123801 LUJJ01000002 Betaproteobacteria Variovorax boronicumulans [LUJJ] 82137 82062 - Val TAC [ENA] ¡û
>W1711143361 LVHG01000050 Betaproteobacteria Variovorax paradoxus [LVHG] 108710 108785 + Val TAC [ENA] ¡û
>W1711259815 LYVO01000013 Betaproteobacteria Variovorax sp. KK3 [LYVO] 83772 83697 - Val TAC [ENA] ¡û
>W1711307442 MAOS01000051 Betaproteobacteria Pandoraea sp. ISTKB [MAOS] 56807 56882 + Val TAC [ENA] ¡û
>W1711386500 MEFM01000021 Betaproteobacteria Variovorax sp. SCN 67-85 [MEFM] 193832 193757 - Val TAC [ENA] ¡û
>W1711387454 MEGR01000001 Betaproteobacteria Variovorax sp. SCN 67-20 [MEGR] 368662 368737 + Val TAC [ENA] ¡û
>W1711505730 MKVU01000006 Betaproteobacteria Pandoraea sp. 64-18 [MKVU] 3446 3371 - Val TAC [ENA] ¡û
>W1712077137 NGUQ01000037 Betaproteobacteria Pandoraea sp. PE-S2T-3 [NGUQ] 211398 211473 + Val TAC [ENA] ¡û
>W1712077164 NGUR01000009 Betaproteobacteria Pandoraea sp. PE-S2R-1 [NGUR] 680176 680101 - Val TAC [ENA] ¡û
>C171007365 CP010518 Betaproteobacteria Pandoraea apista TF81F4 [CP010518] 4828262 4828187 - Val TAC - ¡û
>C171035771 CP015118 Betaproteobacteria Piscinibacter gummiphilus NS21 [CP015118] 3687851 3687776 - Val TAC - ¡û
>C171067153 CP017757 Betaproteobacteria Cupriavidus necator NH9 [CP017757, CP017758] 1655002 1655077 + Val TAC - ¡û
>W131066627 ANOY01000221 Betaproteobacteria Pseudacidovorax intermedius NH-1 [ANOY] 2334 2259 - Val TAC [ENA] ¡û
>W131155725 AQOU01000042 Betaproteobacteria Pandoraea sp. SD6-2 [AQOU] 191970 191895 - Val TAC [ENA] ¡û
>W131156221 AQPL01000207 Betaproteobacteria Cupriavidus sp. WS [AQPL] 48501 48426 - Val TAC [ENA] ¡û
>W131164920 ARBE01000345 Betaproteobacteria Cupriavidus sp. UYPR2.512 [ARBE] 70399 70474 + Val TAC [ENA] ¡û
>WENV180026950 FTIV01008109 [FTIV] metagenome; soil 566 641 + Val TAC [ENA] ¢þ
>WENV180099376 NMRC01000315 [NMRC] plant metagenome; fluid collected inside the plant's pitcher 297 222 - Val TAC [ENA] ¢þ
>WENV180271977 OBEQ012335567 [OBEQ] groundwater metagenome; groundwater 562 487 - Val TAC [ENA] ¢þ
>WENV181227705 OFDN01031527 [OFDN] hot springs metagenome; Water 597 522 - Val TAC [ENA] ¢þ
>WENV181304854 OFID01002545 [OFID] marine metagenome; sea ice 696 621 - Val TAC [ENA] ¢þ
>WENV181307953 OFIS01000058 [OFIS] sludge metagenome; sludge 31741 31816 + Val TAC [ENA] ¢þ
>WENV181312132 OFJB01046910 [OFJB] sludge metagenome; sludge 805 880 + Val TAC [ENA] ¢þ
>WENV181364819 OFPD01003835 [OFPD] sediment metagenome; Lake sediment 582 507 - Val TAC [ENA] ¢þ
>WENV181378554 OFRB01019648 [OFRB] wastewater metagenome; Exp Tend CN 0WW 675 750 + Val TAC [ENA] ¢þ
>WENV181384178 OFRH01030588 [OFRH] wastewater metagenome; Exp Tend NO 100WW 508 433 - Val TAC [ENA] ¢þ
>WENV181400067 OFSF01001182 [OFSF] wastewater metagenome; Exp Tend VB 100WW 3940 4015 + Val TAC [ENA] ¢þ
>WENV181401491 OFTX01000421 [OFTX] sludge metagenome; sludge 16914 16989 + Val TAC [ENA] ¢þ
>WENV181402465 OFTY01001950 [OFTY] sludge metagenome; sludge 5004 4929 - Val TAC [ENA] ¢þ
>W141194250 AYSW01000070 Betaproteobacteria Robbsia andropogonis Ba3549 [AYSW] 64819 64744 - Val TAC [ENA] ¡û
>W141212846 AZRA01000050 Betaproteobacteria Sphaerotilus natans subsp. natans DSM 6575 [AZRA] 7576 7651 + Val TAC [ENA] ¡û
>W141223648 BADL01000283 Betaproteobacteria Ideonella sp. B508-1 [BADL] 3777 3702 - Val TAC [ENA] ¡û
>C08005960 CP001013 Betaproteobacteria Leptothrix cholodnii SP-6 [CP001013] 2092288 2092216 - Val TAC [Ensembl] ¡û
>WENV183703485 PDVJ01017600 [PDVJ] alkali sediment metagenome; glacial lake sediment 1307 1382 + Val TAC [ENA] ¢þ
>WENV183731155 PJTS01013982 [PJTS] soil metagenome; Soil (2) enriched on wood chips: alkali lignin treatment 465 540 + Val TAC [ENA] ¢þ
>WENV183735656 PJUB01000344 [PJUB] soil metagenome; Soil enriched on filter paper: alkali lignin treatment 14713 14638 - Val TAC [ENA] ¢þ
>WENV183736291 PJUC01000426 [PJUC] soil metagenome; Soil enriched on filter paper 17061 16986 - Val TAC [ENA] ¢þ
>WENV183741488 PJUG01000029 [PJUG] feces metagenome; Chicken feces (2) enriched on wood chips: beechwood xylan treatment 108496 108421 - Val TAC [ENA] ¢þ
>WENV183741953 PJUH01000015 [PJUH] feces metagenome; Chicken feces (2) enriched on wood chips: alkali lignin treatment 197874 197799 - Val TAC [ENA] ¢þ
>WENV183744443 PJUK01029656 [PJUK] feces metagenome; Chicken feces enriched on filter paper: alkali lignin treatment 52 127 + Val TAC [ENA] ¢þ
>WENV170559085 CXWL01109628 [CXWL] groundwater metagenome; biofilm material 4859 4784 - Val TAC [ENA] ¢þ
>WENV170559284 CXWL01117726 [CXWL] groundwater metagenome; biofilm material 2683 2758 + Val TAC [ENA] ¢þ
>WENV170559668 CXWL01136024 [CXWL] groundwater metagenome; biofilm material 913 838 - Val TAC [ENA] ¢þ
>W141463917 JFJV02000240 Betaproteobacteria Cupriavidus sp. SK-3 [JFJV] 43750 43675 - Val TAC [ENA] ¡û
>W141463963 JFJW01000069 Betaproteobacteria Cupriavidus sp. SK-4 [JFJW] 80828 80903 + Val TAC [ENA] ¡û
>WENV171003358 NNBT01006210 [NNBT] plant metagenome; symbiotic tissue sample KVJ10 427 502 + Val TAC [ENA] ¢þ
>WENV171003613 NNBU01000756 [NNBU] plant metagenome; symbiotic tissue sample KVJ2 405 330 - Val TAC [ENA] ¢þ
>C181008397 CP010518 Betaproteobacteria Pandoraea apista TF81F4 [CP010518] 1433348 1433273 - Val TAC - ¡û
>C181014213 CP014018 Betaproteobacteria Pandoraea apista FDAARGOS_126 [CP014018] 3705558 3705483 - Val TAC - ¡û
>C181064558 CP022423 Betaproteobacteria Vitreoscilla filiformis ATCC 15551 [CP022423] 2486601 2486526 - Val TAC - ¡û
>C181078461 CP023284 Betaproteobacteria Variovorax boronicumulans J1 [CP023284] 2675825 2675900 + Val TAC - ¡û
>C181103515 CP024645 Betaproteobacteria Piscinibacter gummiphilus NBRC 109400 [CP024645] 3687854 3687779 - Val TAC - ¡û
>C181159364 CP027773 Betaproteobacteria Variovorax sp. PMC12 [CP027773, CP027774] 78613 78688 + Val TAC - ¡û
>C181176194 CP029210 Betaproteobacteria Aquabacterium olei NBRC 110486 [CP029210] 1512874 1512949 + Val TAC - ¡û
>C181224160 LT906435 Betaproteobacteria Pandoraea sputorum NCTC13161 [LT906435] 2337416 2337491 + Val TAC - ¡û
>W1910225300 FMSH01000104 Betaproteobacteria Cupriavidus necator B9 [FMSH] 22554 22479 - Val TAC [ENA] ¡û
>C141006456 CP006667 Betaproteobacteria Ralstonia pickettii DTP0602 [CP006667, CP006668, CP006669] 1582809 1582884 + Val TAC [Ensembl] ¡û
>W1910699689 MERU01000002 Betaproteobacteria Burkholderiales bacterium RIFCSPHIGHO2_01_FULL_63_240 [MERU] 30233 30308 + Val TAC [ENA] ¡û
>W1910699908 MESA01000007 Betaproteobacteria Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_63_20 [MESA] 31887 31812 - Val TAC [ENA] ¡û
>W1910700036 MESD01000031 Betaproteobacteria Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_69_20 [MESD] 53855 53780 - Val TAC [ENA] ¡û
>W1910700351 MESK01000110 Betaproteobacteria Burkholderiales bacterium RIFCSPLOWO2_12_FULL_64_99 [MESK] 271352 271427 + Val TAC [ENA] ¡û
>W1910792851 MRCN01000035 Betaproteobacteria Variovorax boronicumulans ACN3 [MRCN] 14129 14054 - Val TAC [ENA] ¡û
>W1910856344 NBTA01000023 Betaproteobacteria Pandoraea apista Pa16226 [NBTA] 409408 409333 - Val TAC [ENA] ¡û
>W1911398058 NWMV01000032 Betaproteobacteria Macromonas nakdongensis BK-30 [NWMV] 22753 22828 + Val TAC [ENA] ¡û
>W1911496686 OCMW01000001 Betaproteobacteria Variovorax sp. YR752 [OCMW] 2784724 2784799 + Val TAC [ENA] ¡û
>W1911551366 OVTA01000002 Betaproteobacteria Cupriavidus taiwanensis [OVTA] 330783 330858 + Val TAC [ENA] ¡û
>W1911740761 QUSW01000008 Betaproteobacteria Albitalea terrae S-16 [QUSW] 50569 50644 + Val TAC [ENA] ¡û
>W1911775323 QXMN01000024 Betaproteobacteria Acidovorax cavernicola 1011MAR4D40.2 [QXMN] 87675 87750 + Val TAC [ENA] ¡û
>W1810017337 BGPQ01000014 Betaproteobacteria Cupriavidus sp. P-10 [BGPQ] 101502 101427 - Val TAC [ENA] ¡û
>W1810072224 PEFF01000001 Betaproteobacteria Variovorax sp. 54 [PEFF] 5608080 5608155 + Val TAC [ENA] ¡û
>W1810089038 PGEK01000023 Betaproteobacteria Castellaniella caeni CD04 [PGEK] 680 605 - Val TAC [ENA] ¡û
>W1810177564 PJRP01000021 Betaproteobacteria Cupriavidus pauculus UM1 [PJRP] 76159 76234 + Val TAC [ENA] ¡û
>W1810192726 PKMT01000004 Betaproteobacteria Variovorax sp. RO1 [PKMT] 347251 347326 + Val TAC [ENA] ¡û
>W1810427565 PYYA01000017 Betaproteobacteria Pandoraea apista Pa14367 [PYYA] 59653 59728 + Val TAC [ENA] ¡û
>W1810539977 QDHA01000094 Betaproteobacteria Cupriavidus necator CR12 [QDHA] 4863 4788 - Val TAC [ENA] ¡û
>W1810573264 QEKP01000019 Betaproteobacteria Cupriavidus alkaliphilus CAG-122 [QEKP] 59935 60010 + Val TAC [ENA] ¡û
>W1810577511 QEOH01000002 Betaproteobacteria Variovorax sp. GV014 [QEOH] 57567 57492 - Val TAC [ENA] ¡û
>W1810580243 QETA01000001 Betaproteobacteria Corticimicrobacter populi 3d-2-2 [QETA] 255126 255201 + Val TAC [ENA] ¡û
>W1810672025 QJTC01000010 Betaproteobacteria Xylophilus ampelinus CECT 7646 [QJTC] 87142 87067 - Val TAC [ENA] ¡û
>W1810759920 QPJU01000001 Betaproteobacteria Extensimonas vulgaris DSM 100911 [QPJU] 139451 139376 - Val TAC [ENA] ¡û
>W1810763109 QQAV01000006 Betaproteobacteria Pseudacidovorax intermedius DSM 21352 [QQAV] 50108 50183 + Val TAC [ENA] ¡û
>SRA1014426 SRR023845.134149 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 188 263 + Val TAC [SRA]
>SRA1015559 SRR023846.111361 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 174 99 - Val TAC [SRA]
>C151068664 CP010431 Betaproteobacteria Pandoraea sputorum DSM 21091 [CP010431] 3305434 3305509 + Val TAC [Ensembl] ¡û
>C151078580 CP011253 Betaproteobacteria Pandoraea oxalativorans DSM 23570 [CP011253] 4966436 4966361 - Val TAC [Ensembl] ¡û
>C151079031 CP011279 Betaproteobacteria Pandoraea apista TF80G25 [CP011279] 4855801 4855726 - Val TAC [Ensembl] ¡û
>C151083398 CP011501 Betaproteobacteria Pandoraea apista AU2161 [CP011501] 3406796 3406721 - Val TAC [Ensembl] ¡û
>C151101361 HG916765 Betaproteobacteria Castellaniella defragrans 65Phen [HG916765] 1609058 1608983 - Val TAC [Ensembl] ¡û
>W1510015034 BBQM01000016 Betaproteobacteria Cupriavidus basilensis KF708 [BBQM] 62786 62861 + Val TAC [ENA] ¡û
>W1510015086 BBQN01000056 Betaproteobacteria Cupriavidus pauculus KF709 [BBQN] 60491 60416 - Val TAC [ENA] ¡û
>W1510100669 CEWL01000031 Betaproteobacteria Pandoraea apista LMG16407 [CEWL] 250765 250690 - Val TAC [ENA] ¡û
>C11105745 CP002877 Betaproteobacteria Cupriavidus necator N-1 [CP002877, CP002878] 1546582 1546657 + Val TAC [Ensembl] ¡û
>W1511397422 JTCR01000004 Betaproteobacteria Pandoraea fibrosis 6399 [JTCR] 382607 382532 - Val TAC [ENA] ¡û
>W1511397481 JTCS01000003 Betaproteobacteria Pandoraea fibrosis 7641 [JTCS] 240871 240796 - Val TAC [ENA] ¡û
>C11123576 CP002417 Betaproteobacteria Variovorax paradoxus EPS [CP002417] 2164694 2164769 + Val TAC [Ensembl] ¡û
>W1511433169 JUGZ01000051 Betaproteobacteria Methylibium sp. CF468 [JUGZ] 15667 15742 + Val TAC [ENA] ¡û
>W1511433211 JUHA01000023 Betaproteobacteria Methylibium sp. YR605 [JUHA] 56542 56617 + Val TAC [ENA] ¡û
>W1511483789 JWMA01000079 Betaproteobacteria Cupriavidus sp. IDO [JWMA] 71369 71294 - Val TAC [ENA] ¡û
>W1511508922 JXQQ01000020 Betaproteobacteria Variovorax paradoxus MEDvA23 [JXQQ] 25985 25910 - Val TAC [ENA] ¡û
>W1511534655 JYOD01000029 Betaproteobacteria Burkholderiaceae bacterium 16 [JYOD] 52170 52095 - Val TAC [ENA] ¡û
>W1511577566 LAQU01000012 Betaproteobacteria Robbsia andropogonis ICMP2807 [LAQU] 24171 24096 - Val TAC [ENA] ¡û
>C161056198 CP013480 Betaproteobacteria Pandoraea norimbergensis DSM 11628 [CP013480] 4132181 4132256 + Val TAC - ¡û
>C161056295 CP013481 Betaproteobacteria Pandoraea apista DSM 16535 [CP013481] 1210635 1210560 - Val TAC - ¡û
>W121033608 AHJE01000069 Betaproteobacteria Cupriavidus basilensis OR16 [AHJE] 46330 46255 - Val TAC [ENA] ¡û
>W121102765 AKXR01001398 Betaproteobacteria Cupriavidus basilensis B-8 [AKXR] 7152 7227 + Val TAC [ENA] ¡û
>W121102825 AKXS01000168 Betaproteobacteria Pandoraea sp. B-6 [AKXS] 5719 5644 - Val TAC [ENA] ¡û
>W121113665 ALOU01000019 Betaproteobacteria Cupriavidus sp. BIS7 [ALOU] 297115 297190 + Val TAC [ENA] ¡û
>W1610074249 BCWN01000003 Betaproteobacteria Castellaniella caeni NBRC 101664 [BCWN] 57606 57681 + Val TAC [ENA] ¡û
>W1610514397 FMAD01000016 Betaproteobacteria Cupriavidus alkaliphilus [FMAD] 59865 59940 + Val TAC [ENA] ¡û
>W1610604892 LFRI01000330 Betaproteobacteria Aquabacterium parvum [LFRI] 30391 30466 + Val TAC [ENA] ¡û
>W1610722329 LMCN01000003 Betaproteobacteria Rhizobacter sp. Root29 [LMCN] 545379 545454 + Val TAC [ENA] ¡û
>W1610723353 LMDI01000013 Betaproteobacteria Rhizobacter sp. Root1221 [LMDI] 108115 108190 + Val TAC [ENA] ¡û
>W1610723633 LMDM01000023 Betaproteobacteria Rhizobacter sp. Root1238 [LMDM] 310027 310102 + Val TAC [ENA] ¡û
>W1610724818 LMEK01000006 Betaproteobacteria Variovorax sp. Root434 [LMEK] 354076 354151 + Val TAC [ENA] ¡û
>W1610725442 LMEV01000019 Betaproteobacteria Variovorax sp. Root473 [LMEV] 137670 137745 + Val TAC [ENA] ¡û
>W1610732863 LMKO01000025 Betaproteobacteria Xylophilus sp. Leaf220 [LMKO] 59409 59484 + Val TAC [ENA] ¡û
>W1610753880 LNEY01000008 Betaproteobacteria Burkholderiales bacterium Ga0077547 [LNEY] 82824 82899 + Val TAC [ENA] ¡û
>W1610954369 LVHG01000050 Betaproteobacteria Variovorax paradoxus [LVHG] 108710 108785 + Val TAC [ENA] ¡û
>W1710071367 BCWN01000003 Betaproteobacteria Castellaniella caeni NBRC 101664 [BCWN] 57606 57681 + Val TAC [ENA] ¡û
>W1710500087 FMAD01000016 Betaproteobacteria Cupriavidus alkaliphilus [FMAD] 59865 59940 + Val TAC [ENA] ¡û
>W1710506171 FMUJ01000001 Betaproteobacteria Variovorax sp. EL159 [FMUJ] 530313 530388 + Val TAC [ENA] ¡û
>W1710511893 FMYZ01000001 Betaproteobacteria Cupriavidus sp. YR651 [FMYZ] 202315 202240 - Val TAC [ENA] ¡û
>W1710530017 FNOL01000002 Betaproteobacteria Variovorax sp. YR634 [FNOL] 287529 287454 - Val TAC [ENA] ¡û
>W1710531375 FNPM01000007 Betaproteobacteria Variovorax sp. YR266 [FNPM] 252252 252327 + Val TAC [ENA] ¡û
>W1710539557 FNVM01000007 Betaproteobacteria Variovorax sp. NFACC29 [FNVM] 196766 196841 + Val TAC [ENA] ¡û
>W1710542690 FNZJ01000001 Betaproteobacteria Variovorax sp. OK202 [FNZJ] 1367006 1367081 + Val TAC [ENA] ¡û
>W1710545311 FOBJ01000010 Betaproteobacteria Variovorax sp. YR750 [FOBJ] 209098 209023 - Val TAC [ENA] ¡û
>W1710554306 FOII01000006 Betaproteobacteria Variovorax sp. OV084 [FOII] 72560 72485 - Val TAC [ENA] ¡û
>W1710557335 FOKX01000002 Betaproteobacteria Cupriavidus sp. OV038 [FOKX] 102798 102723 - Val TAC [ENA] ¡û
>W1710558129 FOLP01000001 Betaproteobacteria Variovorax sp. OK212 [FOLP] 1367006 1367081 + Val TAC [ENA] ¡û
>W1710562249 FOOV01000004 Betaproteobacteria Variovorax sp. NFACC27 [FOOV] 273725 273650 - Val TAC [ENA] ¡û
>W1710572114 FOWL01000002 Betaproteobacteria Variovorax sp. OK605 [FOWL] 748693 748768 + Val TAC [ENA] ¡û
>W1710572189 FOWM01000003 Betaproteobacteria Cupriavidus sp. OV096 [FOWM] 546329 546404 + Val TAC [ENA] ¡û
>W1710592659 FRCQ01000009 Betaproteobacteria Rhizobacter sp. OV335 [FRCQ] 44952 45027 + Val TAC [ENA] ¡û
>W1710597140 FTMZ01000015 Betaproteobacteria Sphaerotilus natans [FTMZ] 110344 110269 - Val TAC [ENA] ¡û
>W1710726335 LFRI01000330 Betaproteobacteria Aquabacterium parvum [LFRI] 30391 30466 + Val TAC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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