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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.342812 (8 seq.)
>WENV180655831
OCVV010484911
[OCVV] gut metagenome; gut
425
350
-
Lys
CTT
[ENA]
¡û
>WENV180655832
OCVV010484911
[OCVV] gut metagenome; gut
425
350
-
Lys
CTT
[ENA]
¡û
>WENV180661741
OCVV011035112
[OCVV] gut metagenome; gut
325
400
+
Lys
CTT
[ENA]
¡û
>WENV180661742
OCVV011035112
[OCVV] gut metagenome; gut
325
400
+
Lys
CTT
[ENA]
¡û
>WENV180677193
OCVV011619412
[OCVV] gut metagenome; gut
147
72
-
Lys
CTT
[ENA]
¡û
>WENV180677194
OCVV011619412
[OCVV] gut metagenome; gut
147
72
-
Lys
CTT
[ENA]
¡û
>WENV180682317
OCVV012824594
[OCVV] gut metagenome; gut
14178
14253
+
Lys
CTT
[ENA]
¡û
>WENV180682318
OCVV012824594
[OCVV] gut metagenome; gut
14178
14253
+
Lys
CTT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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