tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.366782 (99 seq.)
>W1710861435 LMDP01000002 Alphaproteobacteria Afipia sp. Root123D2 [LMDP] 755909 755834 - Met CAT [ENA] ¡û
>W1710872704 LMME01000018 Alphaproteobacteria Methylobacterium sp. Leaf85 [LMME] 9960 9885 - Met CAT [ENA] ¡û
>W1710873208 LMMP01000051 Alphaproteobacteria Methylobacterium sp. Leaf91 [LMMP] 2733 2658 - Met CAT [ENA] ¡û
>W1710873533 LMMW01000002 Alphaproteobacteria Methylobacterium sp. Leaf100 [LMMW] 19107 19032 - Met CAT [ENA] ¡û
>W1710873613 LMMX01000037 Alphaproteobacteria Methylobacterium sp. Leaf102 [LMMX] 356779 356854 + Met CAT [ENA] ¡û
>W1710873693 LMMZ01000023 Alphaproteobacteria Methylobacterium sp. Leaf104 [LMMZ] 443946 443871 - Met CAT [ENA] ¡û
>W1710873881 LMND01000010 Alphaproteobacteria Methylobacterium sp. Leaf108 [LMND] 78222 78147 - Met CAT [ENA] ¡û
>W1710873911 LMNE01000002 Alphaproteobacteria Methylobacterium sp. Leaf111 [LMNE] 118031 118106 + Met CAT [ENA] ¡û
>W1710874029 LMNG01000030 Alphaproteobacteria Methylobacterium sp. Leaf112 [LMNG] 408291 408366 + Met CAT [ENA] ¡û
>W1710874167 LMNJ01000034 Alphaproteobacteria Methylobacterium sp. Leaf113 [LMNJ] 136784 136859 + Met CAT [ENA] ¡û
>W1710874263 LMNL01000034 Alphaproteobacteria Methylobacterium sp. Leaf117 [LMNL] 801978 802053 + Met CAT [ENA] ¡û
>W1710874336 LMNN01000006 Alphaproteobacteria Methylobacterium sp. Leaf119 [LMNN] 54435 54360 - Met CAT [ENA] ¡û
>W1710874441 LMNP01000027 Alphaproteobacteria Methylobacterium sp. Leaf121 [LMNP] 42710 42635 - Met CAT [ENA] ¡û
>W1710874589 LMNS01000038 Alphaproteobacteria Methylobacterium sp. Leaf123 [LMNS] 505678 505603 - Met CAT [ENA] ¡û
>W1710874645 LMNU01000006 Alphaproteobacteria Methylobacterium sp. Leaf125 [LMNU] 26017 25942 - Met CAT [ENA] ¡û
>W1710878720 LMRE01000023 Alphaproteobacteria Methylobacterium sp. Leaf469 [LMRE] 409174 409249 + Met CAT [ENA] ¡û
>W1710893531 LNEV01000017 Alphaproteobacteria Rhizobiales bacterium Ga0077545 [LNEV] 89800 89875 + Met CAT [ENA] ¡û
>W1711073379 LSIM01000148 Alphaproteobacteria Bradyrhizobium sp. CCH4-A6 [LSIM] 31121 31196 + Met CAT [ENA] ¡û
>W1711073765 LSIX01000337 Alphaproteobacteria Methylobacterium sp. CCH5-D2 [LSIX] 2226 2151 - Met CAT [ENA] ¡û
>W1711169204 LVYV01000053 Alphaproteobacteria Tardiphaga robiniae [LVYV] 50026 50101 + Met CAT [ENA] ¡û
>W1711501149 MKRG01000081 Alphaproteobacteria Afipia sp. 62-7 [MKRG] 8198 8273 + Met CAT [ENA] ¡û
>W1711504237 MKUJ01000003 Alphaproteobacteria Afipia sp. 64-13 [MKUJ] 12251 12326 + Met CAT [ENA] ¡û
>W1711783529 MVOD01000019 Alphaproteobacteria Rhodopseudomonas palustris [MVOD] 42843 42768 - Met CAT [ENA] ¡û
>PL171000295 CP001007 Alphaproteobacteria Methylobacterium radiotolerans JCM 2831 plasmid:pMRAD06 1453 1378 - Met CAT [ENA] ¡û
>W131051726 AMXU01000032 Alphaproteobacteria Methylobacterium sp. MB200 [AMXU] 31403 31478 + Met CAT [ENA] ¡û
>W131159748 AQVT01000001 Alphaproteobacteria Methylobacterium sp. 88A [AQVT] 2373028 2373103 + Met CAT [ENA] ¡û
>C018985 BX571963 Alphaproteobacteria Rhodopseudomonas palustris [BX571963] 1824830 1824905 + Met CAT [Ensembl] ¡û
>C171064809 CP017640 Alphaproteobacteria Methylobacterium sp. C1 [CP017640] 1857791 1857716 - Met CAT - ¡û
>C171092148 CP019322 Alphaproteobacteria Methylorubrum extorquens PSBB040 [CP019322] 3136610 3136685 + Met CAT - ¡û
>C171115201 CP021054 Alphaproteobacteria Methylorubrum zatmanii PSBB041 [CP021054] 5550842 5550767 - Met CAT - ¡û
>W141007455 AGWX01000004 Alphaproteobacteria Afipia broomeae ATCC 49717 [AGWX] 696366 696291 - Met CAT [ENA] ¡û
>W141063766 APJF01000009 Alphaproteobacteria Afipia sp. OHSU_I-C4 [APJF] 35187 35112 - Met CAT [ENA] ¡û
>W141063797 APJG01000011 Alphaproteobacteria Afipia sp. OHSU_I-uncloned [APJG] 35520 35445 - Met CAT [ENA] ¡û
>W141063831 APJH01000004 Alphaproteobacteria Afipia sp. OHSU_II-C2 [APJH] 85343 85418 + Met CAT [ENA] ¡û
>W141063915 APJI01000030 Alphaproteobacteria Afipia sp. OHSU_II-C1 [APJI] 77848 77923 + Met CAT [ENA] ¡û
>W141093634 AVBL01000008 Alphaproteobacteria Afipia sp. NBIMC_P1-C2 [AVBL] 58900 58975 + Met CAT [ENA] ¡û
>W141093705 AVBM01000018 Alphaproteobacteria Afipia sp. NBIMC_P1-C3 [AVBM] 52469 52394 - Met CAT [ENA] ¡û
>W141103918 AVNX01000060 Alphaproteobacteria Methylobacterium sp. L2-4 [AVNX] 10953 10878 - Met CAT [ENA] ¡û
>W141103921 AVNX01000082 Alphaproteobacteria Methylobacterium sp. L2-4 [AVNX] 3359 3284 - Met CAT [ENA] ¡û
>W141194121 AYSU01000001 Alphaproteobacteria Rhodopseudomonas palustris JSC-3b [AYSU] 17960 18035 + Met CAT [ENA] ¡û
>W141222918 BACU01000642 Alphaproteobacteria Azospirillum sp. B4 [BACU] 2670 2595 - Met CAT [ENA] ¡û
>W141223377 BADE01000782 Alphaproteobacteria Methylobacterium sp. B34 [BADE] 6429 6504 + Met CAT [ENA] ¡û
>C08006509 CP000908 Alphaproteobacteria Methylorubrum extorquens PA1 [CP000908] 3965467 3965395 - Met CAT [Ensembl] ¡û
>W141277791 JAEV01000007 Alphaproteobacteria Methylobacterium sp. 10 [JAEV] 439610 439535 - Met CAT [ENA] ¡û
>WENV183636469 OOKD01004968 [OOKD] human gut metagenome; Skin biopsy 1037 962 - Ile2 CAT [ENA] ¢þ
>WENV170551246 CXWJ01002081 [CXWJ] wastewater metagenome; activated sludge 1241 1166 - Met CAT [ENA] ¢þ
>WENV170577827 FSSH01001731 [FSSH] freshwater metagenome; drinking water 11842 11767 - Met CAT [ENA] ¢þ
>C181155074 CP027526 Alphaproteobacteria Magnetospirillum gryphiswaldense MSR-1 [CP027526] 3520728 3520803 + Met CAT - ¡û
>C181155124 CP027527 Alphaproteobacteria Magnetospirillum gryphiswaldense R3/S1 [CP027527] 3520728 3520803 + Met CAT - ¡û
>C181175655 CP029173 Alphaproteobacteria Methylobacterium sp. DM1 [CP029173] 4284617 4284542 - Met CAT - ¡û
>W1910568879 JHAA01000002 Alphaproteobacteria Rhodopseudomonas palustris PSBS [JHAA] 1278592 1278517 - Met CAT [ENA] ¡û
>C09107438 CP001298 Alphaproteobacteria Methylorubrum extorquens CM4 [CP001298] 4051502 4051427 - Met CAT [Ensembl] ¡û
>W1911708564 QOWC01000061 Alphaproteobacteria Methylobacterium crusticola MIMD6 [QOWC] 12668 12743 + Met CAT [ENA] ¡û
>W1911760584 QWVU01000055 Alphaproteobacteria Rhodopseudomonas palustris R1 [QWVU] 13617 13542 - Met CAT [ENA] ¡û
>W1810079105 PEKQ01001124 Alphaproteobacteria Methylobacterium radiotolerans KUT39 [PEKQ] 864 789 - Met CAT [ENA] ¡û
>W1810487227 QAYK01000015 Alphaproteobacteria Methylobacterium sp. GV104 [QAYK] 9283 9208 - Met CAT [ENA] ¡û
>W1810573761 QEKZ01000005 Alphaproteobacteria Methylobacterium organophilum DSM 760 [QEKZ] 7081 7008 - Met CAT [ENA] ¡û
>W1810576941 QENW01000002 Alphaproteobacteria Tardiphaga sp. OV697 [QENW] 911126 911201 + Met CAT [ENA] ¡û
>W1810672331 QJTI01000035 Alphaproteobacteria Rhodopseudomonas faecalis JCM 11668 [QJTI] 16875 16950 + Met CAT [ENA] ¡û
>W1810784400 QRAQ01000006 Alphaproteobacteria Tardiphaga sp. CF115 [QRAQ] 7585 7510 - Met CAT [ENA] ¡û
>SRA1015778 SRR023846.195744 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 181 256 + Met CAT [SRA]
>SRA1015901 SRR023846.249003 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 181 256 + Met CAT [SRA]
>SRA1016006 SRR023846.306440 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 137 62 - Met CAT [SRA]
>SRA1016079 SRR023846.339621 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 88 163 + Met CAT [SRA]
>SRA1016351 SRR023846.461284 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 62 137 + Met CAT [SRA]
>SRA1016465 SRR023846.511842 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 62 137 + Met CAT [SRA]
>SRA1016515 SRR023846.540050 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 62 137 + Met CAT [SRA]
>W10119574 ADVZ01000003 Alphaproteobacteria Afipia sp. 1NLS2 [ADVZ] 408618 408693 + Met CAT [ENA] ¡û
>C11116293 CP002821 Alphaproteobacteria Afipia carboxidovorans OM4 [CP002821] 1056089 1056014 - Met CAT [Ensembl] ¡û
>W11125840 ADVZ01000003 Alphaproteobacteria Afipia sp. 1NLS2 [ADVZ] 408618 408693 + Met CAT [ENA] ¡û
>W1511563271 LABX01000290 Alphaproteobacteria Methylobacterium aquaticum DSM 16371 [LABX] 8836 8761 - Met CAT [ENA] ¡û
>W1511563291 LABY01000034 Alphaproteobacteria Methylobacterium variabile DSM 16961 [LABY] 18534 18609 + Met CAT [ENA] ¡û
>W11168468 AFOF01000037 Alphaproteobacteria Bradyrhizobiaceae bacterium SG-6C [AFOF] 97574 97499 - Met CAT [ENA] ¡û
>W121081105 AKFK01000013 Alphaproteobacteria Methylobacterium sp. GXF4 [AKFK] 31156 31081 - Met CAT [ENA] ¡û
>W121081125 AKFK01000055 Alphaproteobacteria Methylobacterium sp. GXF4 [AKFK] 95075 95000 - Met CAT [ENA] ¡û
>W1610590547 LDRN01000031 Alphaproteobacteria Methylobacterium indicum aquaticum [LDRN] 37364 37439 + Met CAT [ENA] ¡û
>W1610723781 LMDP01000002 Alphaproteobacteria Afipia sp. Root123D2 [LMDP] 755909 755834 - Met CAT [ENA] ¡û
>W1610735050 LMME01000018 Alphaproteobacteria Methylobacterium sp. Leaf85 [LMME] 9960 9885 - Met CAT [ENA] ¡û
>W1610735879 LMMW01000002 Alphaproteobacteria Methylobacterium sp. Leaf100 [LMMW] 19107 19032 - Met CAT [ENA] ¡û
>W1610735959 LMMX01000037 Alphaproteobacteria Methylobacterium sp. Leaf102 [LMMX] 356779 356854 + Met CAT [ENA] ¡û
>W1610736227 LMND01000010 Alphaproteobacteria Methylobacterium sp. Leaf108 [LMND] 78222 78147 - Met CAT [ENA] ¡û
>W1610736257 LMNE01000002 Alphaproteobacteria Methylobacterium sp. Leaf111 [LMNE] 118031 118106 + Met CAT [ENA] ¡û
>W1610736375 LMNG01000030 Alphaproteobacteria Methylobacterium sp. Leaf112 [LMNG] 408291 408366 + Met CAT [ENA] ¡û
>W1610736513 LMNJ01000034 Alphaproteobacteria Methylobacterium sp. Leaf113 [LMNJ] 136784 136859 + Met CAT [ENA] ¡û
>W1610736609 LMNL01000034 Alphaproteobacteria Methylobacterium sp. Leaf117 [LMNL] 801978 802053 + Met CAT [ENA] ¡û
>W1610736682 LMNN01000006 Alphaproteobacteria Methylobacterium sp. Leaf119 [LMNN] 54435 54360 - Met CAT [ENA] ¡û
>W1610736787 LMNP01000027 Alphaproteobacteria Methylobacterium sp. Leaf121 [LMNP] 42710 42635 - Met CAT [ENA] ¡û
>W1610736935 LMNS01000038 Alphaproteobacteria Methylobacterium sp. Leaf123 [LMNS] 505678 505603 - Met CAT [ENA] ¡û
>W1610753797 LNEV01000017 Alphaproteobacteria Rhizobiales bacterium Ga0077545 [LNEV] 89800 89875 + Met CAT [ENA] ¡û
>W1610912684 LSIM01000148 Alphaproteobacteria Bradyrhizobium sp. CCH4-A6 [LSIM] 31121 31196 + Met CAT [ENA] ¡û
>W1610913070 LSIX01000337 Alphaproteobacteria Methylobacterium sp. CCH5-D2 [LSIX] 2226 2151 - Met CAT [ENA] ¡û
>W1610978999 LVYV01000053 Alphaproteobacteria Tardiphaga robiniae [LVYV] 50026 50101 + Met CAT [ENA] ¡û
>W1710539433 FNVI01000040 Alphaproteobacteria Methylobacterium sp. 190mf [FNVI] 25295 25220 - Met CAT [ENA] ¡û
>W1710539435 FNVI01000053 Alphaproteobacteria Methylobacterium sp. 190mf [FNVI] 10107 10182 + Met CAT [ENA] ¡û
>W1710540272 FNWP01000030 Alphaproteobacteria Methylobacterium sp. 275MFSha3.1 [FNWP] 55878 55953 + Met CAT [ENA] ¡û
>W1710567574 FOSV01000050 Alphaproteobacteria Methylorubrum salsuginis [FOSV] 1827 1752 - Met CAT [ENA] ¡û
>W1710568448 FOTP01000009 Alphaproteobacteria Bradyrhizobium sp. NFR13 [FOTP] 13424 13349 - Met CAT [ENA] ¡û
>W1710582170 FPKU01000001 Alphaproteobacteria Devosia enhydra [FPKU] 762366 762291 - Met CAT [ENA] ¡û
>W1710709827 LDRN01000031 Alphaproteobacteria Methylobacterium indicum aquaticum [LDRN] 37364 37439 + Met CAT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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