tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.45267 (77 seq.)
>A171000401 CP001338 Euryarchaeota Methanosphaerula palustris E1-9c [CP001338] 2530742 2530657 - Ser GCT - ¡û
>A171002822 CP003167 Euryarchaeota Methanoregula formicica SMSP [CP003167] 485333 485418 + Ser GCT - ¡û
>A171007211 HE964772 Euryarchaeota Methanoculleus bourgensis MS2 MS2T [HE964772] 596733 596648 - Ser GCT - ¡û
>A171007567 LT158599 Euryarchaeota Methanoculleus bourgensis [LT158599] 611540 611455 - Ser GCT - ¡û
>A171007636 LT549891 Euryarchaeota Methanoculleus bourgensis [LT549891] 838745 838660 - Ser GCT - ¡û
>WENV180353993 OBLQ011266886 [OBLQ] soil metagenome; soil 99 184 + Ser GCT [ENA] ¢þ
>WENV180584173 OCOJ01015654 [OCOJ] soil metagenome; soil 76 161 + Ser GCT [ENA] ¢þ
>WENV181230048 OFEK01000225 [OFEK] activated sludge metagenome; Anaerobic digester 7608 7693 + Ser GCT [ENA] ¢þ
>WENV181230373 OFEK01000744 [OFEK] activated sludge metagenome; Anaerobic digester 25133 25218 + Ser GCT [ENA] ¢þ
>WENV181359221 OFMW01000412 [OFMW] sediment metagenome; Lake sediment 48 133 + Ser GCT [ENA] ¢þ
>WENV181360962 OFNE01000833 [OFNE] sediment metagenome; Lake sediment 206 291 + Ser GCT [ENA] ¢þ
>WENV181361012 OFNF01000454 [OFNF] sediment metagenome; Lake sediment 79 164 + Ser GCT [ENA] ¢þ
>WENV181361185 OFNL01000196 [OFNL] sediment metagenome; Lake sediment 32 117 + Ser GCT [ENA] ¢þ
>WENV181361273 OFNM01001821 [OFNM] sediment metagenome; Lake sediment 575 490 - Ser GCT [ENA] ¢þ
>WENV181361476 OFNY01001869 [OFNY] sediment metagenome; Lake sediment 131 216 + Ser GCT [ENA] ¢þ
>WENV181361491 OFNZ01000109 [OFNZ] sediment metagenome; Lake sediment 779 694 - Ser GCT [ENA] ¢þ
>WENV181361749 OFOH01000657 [OFOH] sediment metagenome; Lake sediment 423 338 - Ser GCT [ENA] ¢þ
>WENV181361777 OFOI01000417 [OFOI] sediment metagenome; Lake sediment 757 672 - Ser GCT [ENA] ¢þ
>WENV181363166 OFOT01000597 [OFOT] sediment metagenome; Lake sediment 390 475 + Ser GCT [ENA] ¢þ
>WENV183512900 OMKS01001744 [OMKS] sediment metagenome; hot spring sediment 13817 13732 - Ser GCT [ENA] ¢þ
>WENV183701667 PDVH01000144 [PDVH] alkali sediment metagenome; glacial lake sediment 3225 3140 - Ser GCT [ENA] ¢þ
>WENV183701763 PDVH01000972 [PDVH] alkali sediment metagenome; glacial lake sediment 4063 4148 + Ser GCT [ENA] ¢þ
>WENV183702075 PDVH01011619 [PDVH] alkali sediment metagenome; glacial lake sediment 229 314 + Ser GCT [ENA] ¢þ
>WENV183702904 PDVJ01000675 [PDVJ] alkali sediment metagenome; glacial lake sediment 6297 6382 + Ser GCT [ENA] ¢þ
>WENV183703314 PDVJ01009041 [PDVJ] alkali sediment metagenome; glacial lake sediment 65 150 + Ser GCT [ENA] ¢þ
>WENV183703333 PDVJ01009874 [PDVJ] alkali sediment metagenome; glacial lake sediment 2064 1979 - Ser GCT [ENA] ¢þ
>WENV183703815 PDVJ01050219 [PDVJ] alkali sediment metagenome; glacial lake sediment 239 154 - Ser GCT [ENA] ¢þ
>At0698 CP000780 Euryarchaeota Methanoregula boonei 6A8 [CP000780] 2296584 2296500 - Ser GCT [Ensembl] ¡û
>At1261 CP000562 Euryarchaeota Methanoculleus marisnigri JR1 [CP000562] 1792799 1792883 + Ser GCT [Ensembl] ¡û
>WENV170561824 CZCB01000166 [CZCB] anaerobic digester metagenome; anaerobic digester 14038 13953 - Ser GCT [ENA] ¢þ
>WENV170562179 CZCB01001303 [CZCB] anaerobic digester metagenome; anaerobic digester 13070 13155 + Ser GCT [ENA] ¢þ
>WENV170668588 LAHQ01002477 [LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over 1820 1735 - Ser GCT [ENA] ¢þ
>WENV170668820 LAHQ01057109 [LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over 408 323 - Ser GCT [ENA] ¢þ
>WENV170669068 LAHR01005769 [LAHR] activated sludge metagenome; Sample C-3; Sludge from acetogenic chamber (third chamber) of Anaerobic Baffled Reactor over 71 156 + Ser GCT [ENA] ¢þ
>WENV170670343 LAHT01002836 [LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over 1156 1071 - Ser GCT [ENA] ¢þ
>WENV170670375 LAHT01004637 [LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over 16909 16994 + Ser GCT [ENA] ¢þ
>WENV170670739 LAHU01000138 [LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from 24142 24057 - Ser GCT [ENA] ¢þ
>WENV170670841 LAHU01002264 [LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from 25181 25094 - Ser GCT [ENA] ¢þ
>WENV170671131 LAHU01017321 [LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from 1788 1703 - Ser GCT [ENA] ¢þ
>WENV170671519 LAHU01071802 [LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from 814 729 - Ser GCT [ENA] ¢þ
>WENV170677571 LDZT01007021 [LDZT] terrestrial metagenome; oil reservoir sample SB1 1556 1471 - Ser GCT [ENA] ¢þ
>WENV170678109 LDZT01011153 [LDZT] terrestrial metagenome; oil reservoir sample SB1 1120 1205 + Ser GCT [ENA] ¢þ
>WENV170678670 LDZU01003608 [LDZU] terrestrial metagenome; oil reservoir sample SB2 8433 8348 - Ser GCT [ENA] ¢þ
>WENV170678713 LDZU01004011 [LDZU] terrestrial metagenome; oil reservoir sample SB2 913 998 + Ser GCT [ENA] ¢þ
>WENV170678763 LDZU01004231 [LDZU] terrestrial metagenome; oil reservoir sample SB2 5473 5388 - Ser GCT [ENA] ¢þ
>WENV170685208 LFRM01078413 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 2083 2168 + Ser GCT [ENA] ¢þ
>WENV170689519 LFRM01298634 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 28488 28573 + Ser GCT [ENA] ¢þ
>WENV170715280 LNQE01001264 [LNQE] hydrocarbon metagenome; hydrocarbon-contaminated ditch 13760 13675 - Ser GCT [ENA] ¢þ
>WENV170715339 LNQE01001586 [LNQE] hydrocarbon metagenome; hydrocarbon-contaminated ditch 1707 1622 - Ser GCT [ENA] ¢þ
>WENV170715953 LQYC01000011 [LQYC] bioreactor metagenome; benzene-degrading methanogenic enrichment culture from a contaminated aquifer at an oil 7163 7078 - Ser GCT [ENA] ¢þ
>WENV170717948 LSQX01055462 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 5236 5321 + Ser GCT [ENA] ¢þ
>WENV170722238 LSQX01222309 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 1668 1583 - Ser GCT [ENA] ¢þ
>WENV170727127 LSQX01405805 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 2146 2231 + Ser GCT [ENA] ¢þ
>WENV170971248 MTKX01002922 [MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 311 396 + Ser GCT [ENA] ¢þ
>WENV170978871 MTKZ01064984 [MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 207 122 - Ser GCT [ENA] ¢þ
>W1910211660 FMID01000003 Euryarchaeota Methanoculleus chikugoensis [FMID] 24833 24918 + Ser GCT [ENA] ¡û
>W1910226983 FNFT01000012 Euryarchaeota Methanoculleus thermophilus DSM 2373 [FNFT] 26063 25978 - Ser GCT [ENA] ¡û
>W1910572520 JMIO01000037 Euryarchaeota Methanoculleus sp. MH98A [JMIO] 48227 48312 + Ser GCT [ENA] ¡û
>W1910583808 JXOJ01000002 Euryarchaeota Methanoculleus sediminis S3Fa [JXOJ] 118826 118911 + Ser GCT [ENA] ¡û
>W1910617185 LHQS01000004 Euryarchaeota Methanoculleus taiwanensis CYW4 [LHQS] 142264 142349 + Ser GCT [ENA] ¡û
>W1910783530 MPOY01000258 Euryarchaeota Methanoculleus sp. EBM-46 [MPOY] 12385 12470 + Ser GCT [ENA] ¡û
>W1911581341 PGCL01000007 Euryarchaeota Methanofollis fontis FWC-SCC2 [PGCL] 21451 21366 - Ser GCT [ENA] ¡û
>ENV09001119 ABSQ01034865 Freshwater sediment metagenome lwMethenol_C1 273 360 + Ser GCT [ENA] ¡û
>W1610000237 AASI01000001 Euryarchaeota Methanoculleus marisnigri JR1 [AASI] 173225 173310 + Ser GCT [ENA] ¡û
>W1610000999 ABZB01000002 Euryarchaeota Methanosphaerula palustris palustris E1-9c [ABZB] 447434 447347 - Ser GCT [ENA] ¡û
>W1610003478 AGCO01000002 Euryarchaeota Methanofollis liminatans DSM 4140 [AGCO] 16048 15963 - Ser GCT [ENA] ¡û
>W1610062975 BCNW01000001 Euryarchaeota Methanofollis ethanolicus HASU [BCNW] 2594158 2594243 + Ser GCT [ENA] ¡û
>W1610063037 BCNX01000009 Euryarchaeota Methanoculleus thermophilus CR-1 [BCNX] 103492 103577 + Ser GCT [ENA] ¡û
>W1610063051 BCNY01000004 Euryarchaeota Methanoculleus horonobensis T10 [BCNY] 21623 21538 - Ser GCT [ENA] ¡û
>W1610605005 LFRN01000052 Euryarchaeota Candidatus Methanoculleus thermohydrogenotrophicum DTU006 [LFRN] 2083 2168 + Ser GCT [ENA] ¡û
>W1610605069 LFRO01000077 Euryarchaeota Methanoculleus sp. DTU007 [LFRO] 28488 28573 + Ser GCT [ENA] ¡û
>W1610613674 LGGD01000047 Euryarchaeota Methanoculleus marisnigri [LGGD] 1120 1205 + Ser GCT [ENA] ¡û
>W1610613813 LGGJ01000059 Euryarchaeota Methanocalculus sp. 52_23 [LGGJ] 1556 1471 - Ser GCT [ENA] ¡û
>W1610614407 LGHE01000016 Euryarchaeota Methanoculleus marisnigri [LGHE] 8433 8348 - Ser GCT [ENA] ¡û
>W1610614469 LGHF01000029 Euryarchaeota Methanomicrobiales archaeon 53_19 [LGHF] 5473 5388 - Ser GCT [ENA] ¡û
>W1610685966 LKUD01000087 Euryarchaeota Methanoculleus sp. SDB [LKUD] 87 2 - Ser GCT [ENA] ¡û
>W1610946083 LUYK01000224 Euryarchaeota Methanomicrobiales archaeon Methan_07 [LUYK] 359 444 + Ser GCT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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