tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.46069 (86 seq.)
>W1711175219 LWEP01000413 Alphaproteobacteria Sulfitobacter sp. HI0021 HI0021 [LWEP] 31656 31567 - Ser GGA [ENA] ¡û
>W1711175275 LWEQ01000642 Alphaproteobacteria Sulfitobacter sp. HI0023 HI0023 [LWEQ] 2273 2184 - Ser GGA [ENA] ¡û
>W1711175285 LWER01000046 Alphaproteobacteria Sulfitobacter sp. HI0027 HI0027 [LWER] 31898 31809 - Ser GGA [ENA] ¡û
>W1711175693 LWEX01000401 Alphaproteobacteria Sulfitobacter sp. HI0040 HI0040 [LWEX] 2279 2190 - Ser GGA [ENA] ¡û
>W1711176093 LWFD01000317 Alphaproteobacteria Sulfitobacter sp. HI0054 [LWFD] 50318 50407 + Ser GGA [ENA] ¡û
>W1711176883 LWFQ01000298 Alphaproteobacteria Sulfitobacter sp. HI0076 HI0076 [LWFQ] 12741 12830 + Ser GGA [ENA] ¡û
>W1711177158 LWFW01000278 Alphaproteobacteria Sulfitobacter sp. HI0082 HI0082 [LWFW] 205 294 + Ser GGA [ENA] ¡û
>W1711177159 LWFW01000313 Alphaproteobacteria Sulfitobacter sp. HI0082 HI0082 [LWFW] 5129 5040 - Ser GGA [ENA] ¡û
>W1711177852 LWGH01000589 Alphaproteobacteria Sulfitobacter sp. HI0129 HI0129 [LWGH] 519 608 + Ser GGA [ENA] ¡û
>C018360 CP000362 Alphaproteobacteria Roseobacter denitrificans OCh 114 [CP000362] 2197740 2197829 + Ser GGA [Ensembl] ¡û
>w011951 AALY01000002 Alphaproteobacteria Roseovarius nubinhibens ISM [AALY] 45634 45725 + Ser GGA [ENA] ¡û
>WENV180043285 LQAH01022362 [LQAH] bioreactor metagenome; bioreactor_4 inoculated with Wadden Sea sediment; 2nd replicate of a sulfate-reducing system that 612 523 - Ser GGA [ENA] ¢þ
>WENV180104987 OAPD01000818 [OAPD] marine metagenome; 2010 90 1 - Ser GGA [ENA] ¢þ
>WENV180110178 OAPM01000964 [OAPM] marine metagenome; ENVO.00002110 216 127 - Ser GGA [ENA] ¢þ
>WENV180112635 OAPP01057866 [OAPP] marine metagenome; Surface water 329 418 + Ser GGA [ENA] ¢þ
>WENV180358511 OBNP01082248 [OBNP] marine metagenome; seawater 315 226 - Ser GGA [ENA] ¢þ
>WENV180367962 OBOF01013269 [OBOF] marine metagenome; ENVO:00002010 691 780 + Ser GGA [ENA] ¢þ
>WENV180376265 OBOM01000225 [OBOM] marine metagenome; Seawater 5978 6067 + Ser GGA [ENA] ¢þ
>WENV180381486 OBOS01000098 [OBOS] marine metagenome; ENVO 00002150 2718 2629 - Ser GGA [ENA] ¢þ
>WENV180595470 OCPD01043144 [OCPD] marine metagenome; Mesotrophic water 244 333 + Ser GGA [ENA] ¢þ
>WENV180595908 OCPG01002288 [OCPG] marine metagenome; ENVO.00002110 651 740 + Ser GGA [ENA] ¢þ
>WENV180637130 OCRG01000472 [OCRG] marine metagenome; seawater 176 87 - Ser GGA [ENA] ¢þ
>W141094774 AVDB01000004 Alphaproteobacteria Rhodobacteraceae bacterium HIMB11 [AVDB] 339518 339607 + Ser GGA [ENA] ¡û
>W08005753 ABID01000003 Alphaproteobacteria Sulfitobacter indolifex HEL-45 [ABID] 174765 174679 - Ser GGA [ENA] ¡û
>W08005921 ABIG01000012 Alphaproteobacteria Roseobacter litoralis Och 149 [ABIG] 25935 25849 - Ser GGA [ENA] ¡û
>W141284774 JAMD01000001 Alphaproteobacteria Pseudosulfitobacter pseudonitzschiae H3 [JAMD] 218050 217961 - Ser GGA [ENA] ¡û
>W141290338 JASH01000014 Alphaproteobacteria Sulfitobacter mediterraneus KCTC 32188 [JASH] 440733 440822 + Ser GGA [ENA] ¡û
>WENV170015512 AZIH01002105 [AZIH] marine sediment metagenome; enrichment culture of sample MGS-ANC(UA) from oil contaminated site at the Ancona Port 2300 2211 - Ser GGA [ENA] ¢þ
>WENV170016440 AZIK01005366 [AZIK] marine sediment metagenome; enrichment culture of sample MGS-ANC(AMM) from oil contaminated site at the Ancona Port 600 689 + Ser GGA [ENA] ¢þ
>WENV170454819 CEVA01062628 [CEVA] marine metagenome genome assembly TARA_125_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 504 415 - Ser GGA [ENA] ¢þ
>W141426677 JEMU01000001 Alphaproteobacteria Sulfitobacter mediterraneus [JEMU] 45008 44919 - Ser GGA [ENA] ¡û
>WENV170475893 CEVI01047546 [CEVI] marine metagenome genome assembly TARA_142_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 487 576 + Ser GGA [ENA] ¢þ
>WENV170520847 CEWF01020792 [CEWF] marine metagenome genome assembly TARA_122_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 323 234 - Ser GGA [ENA] ¢þ
>WENV170580037 FUFK010043685 [FUFK] metagenome; unknown 7510 7421 - Ser GGA [ENA] ¢þ
>WENV170594368 FUFK011292837 [FUFK] metagenome; unknown 347 258 - Ser GGA [ENA] ¢þ
>WENV170595134 FUFK011638530 [FUFK] metagenome; unknown 347 258 - Ser GGA [ENA] ¢þ
>WENV170634349 FYBJ01000314 [FYBJ] marine metagenome; marine 16781 16692 - Ser GGA [ENA] ¢þ
>WENV170674178 LAZR01048822 [LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment 31 120 + Ser GGA [ENA] ¢þ
>WENV170782396 MAAC01009746 [MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days 47445 47534 + Ser GGA [ENA] ¢þ
>C181064483 CP022415 Alphaproteobacteria Pseudosulfitobacter pseudonitzschiae SMR1 [CP022415] 1481436 1481525 + Ser GGA - ¡û
>C181152278 CP027407 Alphaproteobacteria Roseobacter denitrificans FDAARGOS_309 [CP027407] 220863 220952 + Ser GGA - ¡û
>C191018037 CP020694 Alphaproteobacteria Sulfitobacter sp. D7 [CP020694] 1872534 1872623 + Ser GGA - ¡û
>C191160524 CP038492 Alphaproteobacteria Rhodophyticola sp. CCM32 [CP038492] 1615933 1615844 - Ser GGA - ¡û
>W141564899 JIBC01000007 Alphaproteobacteria Sulfitobacter sp. 20_GPM-1509m [JIBC] 202857 202946 + Ser GGA [ENA] ¡û
>W1910442617 FWFJ01000003 Alphaproteobacteria Roseovarius gaetbuli CECT 8370 [FWFJ] 2647 2558 - Ser GGA [ENA] ¡û
>W1910442730 FWFL01000010 Alphaproteobacteria Roseovarius litorisediminis CECT 8287 [FWFL] 2633 2544 - Ser GGA [ENA] ¡û
>W1910443229 FWFX01000001 Alphaproteobacteria Roseovarius albus CECT 7450 [FWFX] 543028 543117 + Ser GGA [ENA] ¡û
>W1910468991 FWXB01000012 Alphaproteobacteria Roseovarius aestuarii CECT 7745 [FWXB] 79388 79477 + Ser GGA [ENA] ¡û
>W1910814134 MVIQ01000001 Alphaproteobacteria Sulfitobacter indolifex SAORIC-263 [MVIQ] 301684 301595 - Ser GGA [ENA] ¡û
>W1911539374 OMPT01000010 Alphaproteobacteria Sulfitobacter mediterraneus EL44 [OMPT] 704338 704427 + Ser GGA [ENA] ¡û
>W1911539920 ONZJ01000002 Alphaproteobacteria Rhodobacteraceae bacterium EL129 [ONZJ] 1513468 1513557 + Ser GGA [ENA] ¡û
>W1911544908 OUMZ01000007 Alphaproteobacteria Roseovarius sp. EL26 [OUMZ] 1202632 1202543 - Ser GGA [ENA] ¡û
>W1810063494 PDUV01000009 Alphaproteobacteria Rhodobacteraceae bacterium 4F10 [PDUV] 328670 328581 - Ser GGA [ENA] ¡û
>W1810494751 QBFE01000021 Alphaproteobacteria Sulfitobacter sp. DFL-23 [QBFE] 71127 71216 + Ser GGA [ENA] ¡û
>W1810494789 QBFF01000026 Alphaproteobacteria Pseudosulfitobacter sp. DSM 107133 PIC-76 [QBFF] 55524 55613 + Ser GGA [ENA] ¡û
>W1810504302 QBKU01000002 Alphaproteobacteria Sulfitobacter mediterraneus DSM 12244 [QBKU] 9694 9605 - Ser GGA [ENA] ¡û
>W1810532459 QCYH01000002 Alphaproteobacteria Pelagivirga sediminicola BH-SD19 [QCYH] 140019 140108 + Ser GGA [ENA] ¡û
>W1810584260 QFAR01000001 Alphaproteobacteria Pelagicola sp. LXJ1103 [QFAR] 136086 136175 + Ser GGA [ENA] ¡û
>W1810591644 QFVT01000003 Alphaproteobacteria Litorivita pollutaquae FSX-11 [QFVT] 77980 78069 + Ser GGA [ENA] ¡û
>W1810670800 QJSD01000005 Alphaproteobacteria Primorskyibacter marinus PX7 [QJSD] 173398 173487 + Ser GGA [ENA] ¡û
>W1810672079 QJTE01000001 Alphaproteobacteria Pseudoroseicyclus aestuarii CECT 9025 [QJTE] 174921 175010 + Ser GGA [ENA] ¡û
>W1810685682 QKZL01000017 Alphaproteobacteria Palleronia aestuarii DSM 22009 [QKZL] 51932 52021 + Ser GGA [ENA] ¡û
>W1810719919 QNQP01000001 Alphaproteobacteria Roseovarius dicentrarchi YLY04 [QNQP] 2568 2479 - Ser GGA [ENA] ¡û
>C11118682 CP002623 Alphaproteobacteria Roseobacter litoralis Och 149 [CP002623] 2276611 2276522 - Ser GGA [Ensembl] ¡û
>W1511518773 JXYH01000002 Alphaproteobacteria Aestuariivita boseongensis BS-B2 [JXYH] 55418 55329 - Ser GGA [ENA] ¡û
>W1610094582 CYTW01000001 Alphaproteobacteria Shimia thalassica CECT 7735 [CYTW] 1868078 1868167 + Ser GGA [ENA] ¡û
>W1610983532 LWEP01000413 Alphaproteobacteria Sulfitobacter sp. HI0021 HI0021 [LWEP] 31656 31567 - Ser GGA [ENA] ¡û
>W1610983588 LWEQ01000642 Alphaproteobacteria Sulfitobacter sp. HI0023 HI0023 [LWEQ] 2273 2184 - Ser GGA [ENA] ¡û
>W1610983598 LWER01000046 Alphaproteobacteria Sulfitobacter sp. HI0027 HI0027 [LWER] 31898 31809 - Ser GGA [ENA] ¡û
>W1610984006 LWEX01000401 Alphaproteobacteria Sulfitobacter sp. HI0040 HI0040 [LWEX] 2279 2190 - Ser GGA [ENA] ¡û
>W1610984406 LWFD01000317 Alphaproteobacteria Sulfitobacter sp. HI0054 [LWFD] 50318 50407 + Ser GGA [ENA] ¡û
>W1610985196 LWFQ01000298 Alphaproteobacteria Sulfitobacter sp. HI0076 HI0076 [LWFQ] 12741 12830 + Ser GGA [ENA] ¡û
>W1610985471 LWFW01000278 Alphaproteobacteria Sulfitobacter sp. HI0082 HI0082 [LWFW] 205 294 + Ser GGA [ENA] ¡û
>W1610985472 LWFW01000313 Alphaproteobacteria Sulfitobacter sp. HI0082 HI0082 [LWFW] 5129 5040 - Ser GGA [ENA] ¡û
>W1610986165 LWGH01000589 Alphaproteobacteria Sulfitobacter sp. HI0129 HI0129 [LWGH] 519 608 + Ser GGA [ENA] ¡û
>W1710515184 FNBP01000004 Alphaproteobacteria Sulfitobacter delicatus [FNBP] 179604 179693 + Ser GGA [ENA] ¡û
>W1710543617 FOAC01000005 Alphaproteobacteria Roseovarius nanhaiticus [FOAC] 52476 52387 - Ser GGA [ENA] ¡û
>W1710562023 FOOO01000017 Alphaproteobacteria Roseobacter denitrificans OCh 114 [FOOO] 31518 31429 - Ser GGA [ENA] ¡û
>W1710562846 FOPG01000001 Alphaproteobacteria Sulfitobacter dubius [FOPG] 579358 579447 + Ser GGA [ENA] ¡û
>W1710571057 FOVP01000008 Alphaproteobacteria Roseovarius lutimaris [FOVP] 8955 8866 - Ser GGA [ENA] ¡û
>W1710584510 FQVP01000001 Alphaproteobacteria Pseudosulfitobacter pseudonitzschiae [FQVP] 701848 701937 + Ser GGA [ENA] ¡û
>W1710587518 FQYO01000006 Alphaproteobacteria Wenxinia saemankumensis [FQYO] 116544 116455 - Ser GGA [ENA] ¡û
>W1710588802 FQZQ01000023 Alphaproteobacteria Shimia gijangensis [FQZQ] 30110 30199 + Ser GGA [ENA] ¡û
>W1710591164 FRBN01000021 Alphaproteobacteria Roseovarius marisflavi [FRBN] 58864 58953 + Ser GGA [ENA] ¡û
>W1710598222 FTNV01000002 Alphaproteobacteria Roseovarius nanhaiticus [FTNV] 51737 51648 - Ser GGA [ENA] ¡û
>W1710606903 FWYD01000014 Alphaproteobacteria Primorskyibacter flagellatus [FWYD] 4253 4164 - Ser GGA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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