tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.780573 (135 seq.)
>W1710864618 LMFZ01000050 Betaproteobacteria Duganella sp. Root1480D1 [LMFZ] 553 480 - Gly TCC [ENA] ¡û
>W1710892688 LNDZ01000032 Betaproteobacteria Betaproteobacteria bacterium Ga0074130 [LNDZ] 80009 80082 + Gly TCC [ENA] ¡û
>W1710925686 LODL01000019 Betaproteobacteria Dechloromonas denitrificans [LODL] 516758 516685 - Gly TCC [ENA] ¡û
>W131046027 AMSA01000011 Betaproteobacteria Herbaspirillum rubrisubalbicans Os45 [AMSA] 396 323 - Gly TCC [ENA] ¡û
>W131046077 AMSB01000011 Betaproteobacteria Herbaspirillum rubrisubalbicans Os34 [AMSB] 426 353 - Gly TCC [ENA] ¡û
>W131062299 ANJR01000031 Betaproteobacteria Herbaspirillum huttiense subsp. putei IAM 15032 [ANJR] 106943 106870 - Gly TCC [ENA] ¡û
>W131160254 AQWL01000002 Betaproteobacteria Thiobacillus denitrificans DSM 12475 [AQWL] 454348 454421 + Gly TCC [ENA] ¡û
>W131161591 AQXU01000025 Betaproteobacteria Leeia oryzae DSM 17879 [AQXU] 1413 1340 - Gly TCC [ENA] ¡û
>W131168094 ARDU01000009 Betaproteobacteria Thiobacillus thioparus DSM 505 [ARDU] 575 502 - Gly TCC [ENA] ¡û
>W131223579 AUCE01000011 Betaproteobacteria Azonexus hydrophilus DSM 23864 [AUCE] 705145 705218 + Gly TCC [ENA] ¡û
>W131223756 AUCH01000008 Betaproteobacteria Azovibrio restrictus DSM 23866 [AUCH] 193895 193968 + Gly TCC [ENA] ¡û
>W1711386436 MEFI01000007 Betaproteobacteria Thiobacillus sp. SCN 63-1177 [MEFI] 395 322 - Gly TCC [ENA] ¡û
>W1711386465 MEFK01000267 Betaproteobacteria Thiobacillus sp. SCN 63-374 [MEFK] 363 290 - Gly TCC [ENA] ¡û
>W1711387312 MEGN01000001 Betaproteobacteria Thiobacillus sp. SCN 65-179 [MEGN] 394 321 - Gly TCC [ENA] ¡û
>W1711387364 MEGO01000022 Betaproteobacteria Thiobacillus sp. SCN 64-317 [MEGO] 386 313 - Gly TCC [ENA] ¡û
>W1711423810 MIDJ01000191 Betaproteobacteria Thiobacillus sp. GWE1_62_9 [MIDJ] 33842 33915 + Gly TCC [ENA] ¡û
>W1711430700 MIJG01000001 Betaproteobacteria Herbaspirillum camelliae WT00C [MIJG] 1053546 1053473 - Gly TCC [ENA] ¡û
>W1711504040 MKUE01000079 Betaproteobacteria Thiobacillus sp. 65-1059 [MKUE] 134633 134706 + Gly TCC [ENA] ¡û
>W1711504098 MKUF01000015 Betaproteobacteria Thiobacillus sp. 65-69 [MKUF] 600956 601029 + Gly TCC [ENA] ¡û
>W1711504117 MKUG01000090 Betaproteobacteria Thiobacillus sp. 65-1402 [MKUG] 25977 26050 + Gly TCC [ENA] ¡û
>W1711504173 MKUH01000019 Betaproteobacteria Candidatus Accumulibacter sp. 66-26 [MKUH] 1389 1316 - Gly TCC [ENA] ¡û
>W1711506499 MKWL01000019 Betaproteobacteria Thiobacillus sp. 0-1251 [MKWL] 200775 200848 + Gly TCC [ENA] ¡û
>W1711506533 MKWM01000019 Betaproteobacteria Thiobacillus sp. 63-78 [MKWM] 425 352 - Gly TCC [ENA] ¡û
>W1711506578 MKWN01000029 Betaproteobacteria Thiobacillus sp. 65-29 [MKWN] 348 275 - Gly TCC [ENA] ¡û
>W1711718035 MTHD01000001 Betaproteobacteria Azonexus hydrophilus [MTHD] 459356 459429 + Gly TCC [ENA] ¡û
>W1711765096 MUXB01000019 Betaproteobacteria Herbaspirillum sp. VT-16-41 [MUXB] 53080 53007 - Gly TCC [ENA] ¡û
>W1712110285 NJGU01000016 Betaproteobacteria Herbaspirillum robiniae HZ10 [NJGU] 96453 96526 + Gly TCC [ENA] ¡û
>W1712110336 NJGV01000027 Betaproteobacteria Herbaspirillum aquaticum [NJGV] 90080 90153 + Gly TCC [ENA] ¡û
>C171021195 CP013136 Betaproteobacteria Herbaspirillum seropedicae AU14040 [CP013136] 114641 114714 + Gly TCC - ¡û
>C171085379 CP018845 Betaproteobacteria Herbaspirillum robiniae AA6 [CP018845] 3440404 3440331 - Gly TCC - ¡û
>C171094890 CP019509 Betaproteobacteria Aquaspirillum sp. LM1 [CP019509] 215036 215109 + Gly TCC - ¡û
>C007460 CP000089 Betaproteobacteria Dechloromonas aromatica [CP000089] 347506 347579 + Gly TCC [Ensembl] ¡û
>C025383 CP000116 Betaproteobacteria Thiobacillus denitrificans ATCC 25259 [CP000116] 419145 419218 + Gly TCC [Ensembl] ¡û
>w028108 ABCT01000002 Betaproteobacteria Limnobacter sp. MED105 [ABCT] 13349 13279 - Gly TCC [ENA] ¡û
>WENV180015433 FQKF010671668 [FQKF] soil metagenome; Soil 72 1 - Gly TCC [ENA] ¢þ
>WENV180037120 FVAA010630154 [FVAA] soil metagenome; Soil 72 1 - Gly TCC [ENA] ¢þ
>W141003843 AEEC02000036 Betaproteobacteria Herbaspirillum frisingense GSF30 [AEEC] 55002 55075 + Gly TCC [ENA] ¡û
>WENV180109692 OAPK01054892 [OAPK] marine metagenome; ENVO:00002042 197 124 - Gly TCC [ENA] ¢þ
>WENV180117954 OARM01004756 [OARM] human gut metagenome; ENVO:feces 209 282 + Gly TCC [ENA] ¢þ
>WENV180256335 OBEQ010807461 [OBEQ] groundwater metagenome; groundwater 202 275 + Gly TCC [ENA] ¢þ
>WENV180285216 OBID01279765 [OBID] metagenome; sludge 223 150 - Gly TCC [ENA] ¢þ
>WENV180295745 OBIZ01284139 [OBIZ] soil metagenome; soil 190 263 + Gly TCC [ENA] ¢þ
>WENV180311309 OBJT01219710 [OBJT] soil metagenome; soil 161 88 - Gly TCC [ENA] ¢þ
>WENV180351426 OBLQ010055700 [OBLQ] soil metagenome; soil 468 395 - Gly TCC [ENA] ¢þ
>WENV180370983 OBOI01000049 [OBOI] sediment metagenome; sediment 289 216 - Gly TCC [ENA] ¢þ
>WENV181169484 OEIV010002811 [OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 254 181 - Gly TCC [ENA] ¢þ
>WENV181191661 OEPS010157048 [OEPS] soil metagenome; soil 407 334 - Gly TCC [ENA] ¢þ
>WENV181221669 OFCW01000495 [OFCW] microbial mat metagenome; Microbial Mat 144 71 - Gly TCC [ENA] ¢þ
>WENV181311230 OFJB01000342 [OFJB] sludge metagenome; sludge 22630 22703 + Gly TCC [ENA] ¢þ
>WENV181311864 OFJB01017037 [OFJB] sludge metagenome; sludge 1561 1634 + Gly TCC [ENA] ¢þ
>WENV181371497 OFQV01010041 [OFQV] wastewater metagenome; WWTP Cannobio (Effluent) 615 688 + Gly TCC [ENA] ¢þ
>WENV181372004 OFQW01007171 [OFQW] wastewater metagenome; Exp Tend NO 90WW 1010 937 - Gly TCC [ENA] ¢þ
>WENV181373226 OFQX01037606 [OFQX] wastewater metagenome; WWTP Novara (Effluent) 54 127 + Gly TCC [ENA] ¢þ
>WENV181376087 OFQZ01015781 [OFQZ] wastewater metagenome; Exp Tend NO 0WW 1352 1425 + Gly TCC [ENA] ¢þ
>WENV181378460 OFRB01007846 [OFRB] wastewater metagenome; Exp Tend CN 0WW 537 464 - Gly TCC [ENA] ¢þ
>WENV181379078 OFRC01018746 [OFRC] wastewater metagenome; Exp Tend CN 10WW 565 492 - Gly TCC [ENA] ¢þ
>WENV181390495 OFRO01055275 [OFRO] wastewater metagenome; Exp Tend NO 10WW 170 97 - Gly TCC [ENA] ¢þ
>WENV181395575 OFSA01006776 [OFSA] freshwater metagenome; Freshwater Lake 57 130 + Gly TCC [ENA] ¢þ
>WENV181415707 OGCL01020251 [OGCL] hot springs metagenome; Hot spring water 330 257 - Gly TCC [ENA] ¢þ
>WENV181731685 OGQD01002279 [OGQD] human gut metagenome; faeces 286 213 - Gly TCC [ENA] ¢þ
>WENV181834817 OGVG01001275 [OGVG] freshwater metagenome; freshwater 866 793 - Gly TCC [ENA] ¢þ
>W141223407 BADF01000432 Betaproteobacteria Herbaspirillum sp. B39 [BADF] 205 278 + Gly TCC [ENA] ¡û
>W141223505 BADI01000794 Betaproteobacteria Herbaspirillum sp. B65 [BADI] 1858 1785 - Gly TCC [ENA] ¡û
>W141223542 BADJ01000933 Betaproteobacteria Herbaspirillum sp. B501 [BADJ] 155 228 + Gly TCC [ENA] ¡û
>WENV182540650 OJAO01000579 [OJAO] seawater metagenome; Sea water 1583 1510 - Gly TCC [ENA] ¢þ
>WENV182586742 OJHK01004085 [OJHK] seawater metagenome; Sea water 1638 1711 + Gly TCC [ENA] ¢þ
>W141277639 JAET01000001 Betaproteobacteria Dechloromonas agitata is5 [JAET] 533857 533784 - Gly TCC [ENA] ¡û
>WENV183703387 PDVJ01011818 [PDVJ] alkali sediment metagenome; glacial lake sediment 305 378 + Gly TCC [ENA] ¢þ
>WENV183703419 PDVJ01013299 [PDVJ] alkali sediment metagenome; glacial lake sediment 577 650 + Gly TCC [ENA] ¢þ
>WENV183738294 PJUD01152647 [PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment 333 406 + Gly TCC [ENA] ¢þ
>ENV08001494 ABNE01014728 fish metagenome; viral fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA; fish were sick at time of sampling 10 83 + Gly TCC [ENA] ¡û
>WENV170007586 AMWB02142459 [AMWB] bioreactor metagenome; anode biofilm in microbial fuel cells 1132 1205 + Gly TCC [ENA] ¢þ
>WENV170007636 AMWB02147341 [AMWB] bioreactor metagenome; anode biofilm in microbial fuel cells 1170 1097 - Gly TCC [ENA] ¢þ
>WENV170009295 APMI01000040 [APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater 146402 146475 + Gly TCC [ENA] ¢þ
>WENV170010620 APMI01022854 [APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater 356 429 + Gly TCC [ENA] ¢þ
>WENV170010921 APMI01035108 [APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater 292 219 - Gly TCC [ENA] ¢þ
>WENV170010924 APMI01035110 [APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater 74 1 - Gly TCC [ENA] ¢þ
>WENV170164877 CEON01038207 [CEON] marine metagenome genome assembly TARA_034_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 563 636 + Gly TCC [ENA] ¢þ
>WENV170165252 CEON01096413 [CEON] marine metagenome genome assembly TARA_034_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 327 254 - Gly TCC [ENA] ¢þ
>WENV170201430 CEPQ01019873 [CEPQ] marine metagenome genome assembly TARA_038_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 261 188 - Gly TCC [ENA] ¢þ
>WENV170201643 CEPQ01041308 [CEPQ] marine metagenome genome assembly TARA_038_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 322 249 - Gly TCC [ENA] ¢þ
>WENV170219957 CEPZ01086575 [CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1006 1079 + Gly TCC [ENA] ¢þ
>WENV170227985 CEQF01160932 [CEQF] marine metagenome genome assembly TARA_068_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 336 409 + Gly TCC [ENA] ¢þ
>WENV170229613 CEQG01139174 [CEQG] marine metagenome genome assembly TARA_076_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1075 1148 + Gly TCC [ENA] ¢þ
>WENV170243951 CEQO01268505 [CEQO] marine metagenome genome assembly TARA_078_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 719 792 + Gly TCC [ENA] ¢þ
>WENV170300669 CESG01139710 [CESG] marine metagenome genome assembly TARA_078_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 25951 26024 + Gly TCC [ENA] ¢þ
>WENV170365759 CETN01160369 [CETN] marine metagenome genome assembly TARA_122_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 261 188 - Gly TCC [ENA] ¢þ
>WENV170435875 CEUT01002014 [CEUT] marine metagenome genome assembly TARA_125_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 261 188 - Gly TCC [ENA] ¢þ
>WENV170521217 CEWF01132664 [CEWF] marine metagenome genome assembly TARA_122_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 680 753 + Gly TCC [ENA] ¢þ
>WENV170573163 FLYJ01002197 [FLYJ] hot springs metagenome; Sediment 1708 1781 + Gly TCC [ENA] ¢þ
>WENV170639352 JFJP01002028 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 25549 25622 + Gly TCC [ENA] ¢þ
>WENV170651655 JRYG01000262 [JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated 2969 3042 + Gly TCC [ENA] ¢þ
>WENV170653507 JRYJ01002963 [JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated 10353 10426 + Gly TCC [ENA] ¢þ
>WENV170680646 LFEF01007126 [LFEF] freshwater metagenome; waterbloom 14570 14497 - Gly TCC [ENA] ¢þ
>WENV170689340 LFRM01289598 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 600 527 - Gly TCC [ENA] ¢þ
>WENV170709787 LNFM01000706 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 79595 79668 + Gly TCC [ENA] ¢þ
>WENV170712466 LNFM01013699 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 79 6 - Gly TCC [ENA] ¢þ
>WENV170714709 LNFM01095161 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 1480 1407 - Gly TCC [ENA] ¢þ
>WENV170838814 MDSZ01174924 [MDSZ] marine metagenome; seawater 1365 1292 - Gly TCC [ENA] ¢þ
>WENV170893156 MDTD01048511 [MDTD] marine metagenome; seawater 974 1047 + Gly TCC [ENA] ¢þ
>C181163946 CP028324 Betaproteobacteria Pseudoduganella armeniaca ZMN-3 [CP028324] 6145540 6145467 - Gly TCC - ¡û
>C181187743 CP030092 Betaproteobacteria Massilia sp. YMA4 [CP030092] 5207055 5207128 + Gly TCC - ¡û
>C191029326 CP024996 Betaproteobacteria Herbaspirillum rubrisubalbicans DSM 11543 [CP024996] 128855 128928 + Gly TCC - ¡û
>C191081640 CP031842 Betaproteobacteria Dechloromonas sp. HYN0024 [CP031842] 313011 313084 + Gly TCC - ¡û
>C191124223 CP034395 Betaproteobacteria Herbaspirillum seropedicae AU13965 [CP034395] 114871 114944 + Gly TCC - ¡û
>C191150812 CP036401 Betaproteobacteria Pseudoduganella albidiflava DSM 17472 [CP036401] 6539820 6539747 - Gly TCC - ¡û
>C191156611 CP037993 Betaproteobacteria Herbaspirillum huttiense NFYY 53159 [CP037993] 149341 149414 + Gly TCC - ¡û
>C191173968 CP040017 Betaproteobacteria Pseudoduganella umbonata DSMZ 26121 [CP040017] 5333783 5333856 + Gly TCC - ¡û
>W09100869 AADF01000001 Betaproteobacteria Dechloromonas aromatica RCB [AADF] 1421502 1421575 + Gly TCC [ENA] ¡û
>W09101596 AAFH01000008 Betaproteobacteria Thiobacillus denitrificans ATCC 25259 [AAFH] 18622 18549 - Gly TCC [ENA] ¡û
>W1910577882 JUGD01000045 Betaproteobacteria Herbaspirillum rubrisubalbicans Os38 [JUGD] 14861 14934 + Gly TCC [ENA] ¡û
>W1910578312 JWJC01000017 Betaproteobacteria Herbaspirillum rubrisubalbicans Os44 [JWJC] 432 359 - Gly TCC [ENA] ¡û
>W1910785821 MQVZ01000001 Betaproteobacteria Limnobacter sp. SAORIC-690 SAORIC-690 [MQVZ] 1358062 1358135 + Gly TCC [ENA] ¡û
>W1911740767 QUSW01000013 Betaproteobacteria Albitalea terrae S-16 [QUSW] 30670 30743 + Gly TCC [ENA] ¡û
>W1810005519 BFBP01000024 Betaproteobacteria Azospira sp. I13 [BFBP] 73775 73848 + Gly TCC [ENA] ¡û
>SRA1001574 SRR001072.21548 Tilapia Farm, viral fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA; fish were sick at time of sampling (SRP000160) 10 83 + Gly TCC [SRA]
>W1810194058 PKOI01000018 Betaproteobacteria Herbaspirillum sp. BH-1 [PKOI] 26749 26822 + Gly TCC [ENA] ¡û
>W1810195601 PKRR01000003 Betaproteobacteria Uliginosibacterium sp. TH139 [PKRR] 97770 97697 - Gly TCC [ENA] ¡û
>W1810659739 QJKI01000005 Betaproteobacteria Rivihabitans pingtungensis DSM 29661 [QJKI] 118728 118655 - Gly TCC [ENA] ¡û
>C151087558 CP011930 Betaproteobacteria Herbaspirillum seropedicae Z67 [CP011930] 110152 110225 + Gly TCC [Ensembl] ¡û
>C151092629 CP012201 Betaproteobacteria Massilia sp. NR 4-1 [CP012201] 4147416 4147343 - Gly TCC - ¡û
>C10107794 CP002039 Betaproteobacteria Herbaspirillum seropedicae SmR1 [CP002039] 110151 110224 + Gly TCC [Ensembl] ¡û
>W11114405 ADDK02000001 Betaproteobacteria Azospira oryzae PS [ADDK] 1157390 1157317 - Gly TCC [ENA] ¡û
>C121006976 CP003153 Betaproteobacteria Azospira oryzae PS [CP003153] 374021 373948 - Gly TCC [Ensembl] ¡û
>C161060431 CP013737 Betaproteobacteria Herbaspirillum rubrisubalbicans M1 [CP013737] 127548 127621 + Gly TCC [Ensembl] ¡û
>W121068732 AJVC01000006 Betaproteobacteria Herbaspirillum sp. GW103 [AJVC] 490988 491061 + Gly TCC [ENA] ¡û
>WENV061679 AACY023437260 Marine microbial communities from Global Ocean Sampling (GOS) 830 903 + Gly TCC [ENA]
>W1610071852 BCUJ01000018 Betaproteobacteria Herbaspirillum rubrisubalbicans NBRC 102523 [BCUJ] 280 207 - Gly TCC [ENA] ¡û
>W1610726964 LMFZ01000050 Betaproteobacteria Duganella sp. Root1480D1 [LMFZ] 553 480 - Gly TCC [ENA] ¡û
>W1610752954 LNDZ01000032 Betaproteobacteria Betaproteobacteria bacterium Ga0074130 [LNDZ] 80009 80082 + Gly TCC [ENA] ¡û
>W1610783332 LODL01000019 Betaproteobacteria Dechloromonas denitrificans [LODL] 516758 516685 - Gly TCC [ENA] ¡û
>W1610934869 LUJK01000043 Betaproteobacteria Limnobacter sp. CACIAM 66H1 [LUJK] 214 141 - Gly TCC [ENA] ¡û
>WENV080165 AATO01010583 Wastewater EBPR microbial communities from Bioreactor (USA sludge) 205 132 - Gly TCC [ENA]
>W1710069054 BCUJ01000018 Betaproteobacteria Herbaspirillum rubrisubalbicans NBRC 102523 [BCUJ] 280 207 - Gly TCC [ENA] ¡û
>W1710516924 FNCY01000001 Betaproteobacteria Propionivibrio dicarboxylicus [FNCY] 737481 737554 + Gly TCC [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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