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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.95735 (224 seq.)
>W1710793237
LJPB01000058
Gammaproteobacteria
Photorhabdus laumondii subsp. laumondii [LJPB]
544
460
-
Leu
CAA
[ENA]
¡û
>W1710815945
LKKQ01000078
Gammaproteobacteria
Pectobacterium brasiliense subsp. brasiliense [LKKQ]
191325
191409
+
Leu
CAA
[ENA]
¡û
>W1710932265
LOIC01000095
Gammaproteobacteria
Photorhabdus namnaonensis luminescens [LOIC]
133121
133205
+
Leu
CAA
[ENA]
¡û
>W1710938542
LOMY01000202
Gammaproteobacteria
Photorhabdus australis subsp. australis [LOMY]
196875
196959
+
Leu
CAA
[ENA]
¡û
>W1711178399
LWGQ01000167
Gammaproteobacteria
Photorhabdus luminescens [LWGQ]
78226
78142
-
Leu
CAA
[ENA]
¡û
>W1711184795
LWMI01000007
Gammaproteobacteria
Candidatus Arsenophonus triatominarum [LWMI]
318996
319080
+
Leu
CAA
[ENA]
¡û
>W1711327258
MBJU01000014
Gammaproteobacteria
Photorhabdus temperata [MBJU]
4617
4533
-
Leu
CAA
[ENA]
¡û
>W1711430151
MIIW01000095
Gammaproteobacteria
Shigella sp. FC1655 [MIIW]
2974
2890
-
Leu
CAA
[ENA]
¡û
>W1711487818
MKGQ01000004
Gammaproteobacteria
Xenorhabdus eapokensis DL20 [MKGQ]
6246
6162
-
Leu
CAA
[ENA]
¡û
>W1711487905
MKGR01000010
Gammaproteobacteria
Xenorhabdus thuongxuanensis 30TX1 [MKGR]
8945
8861
-
Leu
CAA
[ENA]
¡û
>W1711572484
MNBX01000048
Gammaproteobacteria
Sodalis sp. TME1 [MNBX]
2643
2727
+
Leu
CAA
[ENA]
¡û
>W1711738772
MUBJ01000006
Gammaproteobacteria
Xenorhabdus vietnamensis [MUBJ]
182021
181937
-
Leu
CAA
[ENA]
¡û
>W1711738858
MUBK01000031
Gammaproteobacteria
Xenorhabdus beddingii [MUBK]
15605
15689
+
Leu
CAA
[ENA]
¡û
>W1711797431
MWTK01000002
Gammaproteobacteria
Yersinia frederiksenii [MWTK]
471111
471027
-
Leu
CAA
[ENA]
¡û
>W1711853439
MYFJ01000045
Gammaproteobacteria
Photorhabdus luminescens [MYFJ]
234564
234648
+
Leu
CAA
[ENA]
¡û
>W1712109999
NJFP01000003
Gammaproteobacteria
Hafnia alvei [NJFP]
440461
440377
-
Leu
CAA
[ENA]
¡û
>C171002681
CP009769
Gammaproteobacteria
Pectobacterium brasiliense BC1 [CP009769]
422543
422459
-
Leu
CAA
-
¡û
>C171046455
CP016176
Gammaproteobacteria
Xenorhabdus hominickii ANU1 [CP016176]
2909032
2908948
-
Leu
CAA
-
¡û
>C171105199
CP020350
Gammaproteobacteria
Pectobacterium brasiliense SX309 [CP020350]
4428979
4428895
-
Leu
CAA
-
¡û
>W131251445
CAVM010000118
Gammaproteobacteria
Xenorhabdus nematophila F1 [CAVM]
9234
9318
+
Leu
CAA
[ENA]
¡û
>C016703
BX470251
Gammaproteobacteria
Photorhabdus laumondii [BX470251]
5229118
5229034
-
Leu
CAA
[Ensembl]
¡û
>C022124
AP008232
Gammaproteobacteria
Sodalis glossinidius str. 'morsitans' [AP008232]
3643345
3643261
-
Leu
CAA
[Ensembl]
¡û
>WENV180143599
OATY01000008
[OATY] human gut metagenome; faeces
134226
134310
+
Leu
CAA
[ENA]
¢þ
>W141147739
AWXH01000002
Gammaproteobacteria
Serratia sp. ATCC 39006 [AWXH]
754275
754359
+
Leu
CAA
[ENA]
¡û
>W141153896
AXDT01000067
Gammaproteobacteria
Photorhabdus temperata J3 [AXDT]
404
320
-
Leu
CAA
[ENA]
¡û
>W141186709
AYKS02000044
Gammaproteobacteria
Serratia sp. DD3 [AYKS]
6413
6329
-
Leu
CAA
[ENA]
¡û
>W141193806
AYSJ01000004
Gammaproteobacteria
Photorhabdus khanii subsp. khanii NC19 [AYSJ]
319952
319868
-
Leu
CAA
[ENA]
¡û
>W141230076
BASS01000429
Gammaproteobacteria
Sodalis-like symbiont of Philaenus spumarius [BASS]
221
137
-
Leu
CAA
[ENA]
¡û
>W141244686
CAKR01000016
Gammaproteobacteria
Yersinia massiliensis CCUG 53443 [CAKR]
106994
106910
-
Leu
CAA
[ENA]
¡û
>W141254026
CBST010000137
Gammaproteobacteria
Xenorhabdus bovienii str. feltiae France [CBST]
9865
9949
+
Leu
CAA
[ENA]
¡û
>W141254077
CBSU010000157
Gammaproteobacteria
Xenorhabdus bovienii str. feltiae Florida [CBSU]
4751
4667
-
Leu
CAA
[ENA]
¡û
>W141254124
CBSV010000023
Gammaproteobacteria
Xenorhabdus bovienii str. feltiae Moldova [CBSV]
9893
9977
+
Leu
CAA
[ENA]
¡û
>W141254196
CBSW010000059
Gammaproteobacteria
Xenorhabdus bovienii str. puntauvense [CBSW]
10643
10559
-
Leu
CAA
[ENA]
¡û
>W141254292
CBSX010000185
Gammaproteobacteria
Xenorhabdus bovienii str. oregonense [CBSX]
9331
9247
-
Leu
CAA
[ENA]
¡û
>W141254370
CBSY010000285
Gammaproteobacteria
Xenorhabdus bovienii str. kraussei Quebec [CBSY]
13597
13513
-
Leu
CAA
[ENA]
¡û
>W141254439
CBSZ010000423
Gammaproteobacteria
Xenorhabdus bovienii str. kraussei Becker Underwood [CBSZ]
12245
12161
-
Leu
CAA
[ENA]
¡û
>W141254456
CBTA010000046
Gammaproteobacteria
Xenorhabdus bovienii str. Jollieti [CBTA]
12886
12970
+
Leu
CAA
[ENA]
¡û
>W141254505
CBTB010000012
Gammaproteobacteria
Xenorhabdus bovienii str. Intermedium [CBTB]
23342
23426
+
Leu
CAA
[ENA]
¡û
>W141258428
CBXE010000354
Gammaproteobacteria
Xenorhabdus cabanillasii JM26 [CBXE]
20473
20557
+
Leu
CAA
[ENA]
¡û
>W141258472
CBXF010000103
Gammaproteobacteria
Xenorhabdus szentirmaii DSM 16338 [CBXF]
18286
18370
+
Leu
CAA
[ENA]
¡û
>W141276926
JAEE01000008
Gammaproteobacteria
Phaseolibacter flectens ATCC 12775 [JAEE]
133104
133188
+
Leu
CAA
[ENA]
¡û
>WENV183109693
OLNN01016737
[OLNN] human gut metagenome; faeces
1898
1814
-
Leu
CAA
[ENA]
¢þ
>WENV183371344
OLXV01018526
[OLXV] human gut metagenome; feces
1511
1427
-
Leu
CAA
[ENA]
¢þ
>W141350015
JCKH01000005
Gammaproteobacteria
Hafnia alvei FB1 [JCKH]
86405
86321
-
Leu
CAA
[ENA]
¡û
>WENV170707952
LNAP01041544
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
1308
1224
-
Leu
CAA
[ENA]
¢þ
>W141461944
JFGV01000080
Gammaproteobacteria
Photorhabdus aegyptia BA1 [JFGV]
2354
2270
-
Leu
CAA
[ENA]
¡û
>C181002167
AP017469
Gammaproteobacteria
Hafnia sp. CBA7124 [AP017469]
3969816
3969732
-
Leu
CAA
-
¡û
>C181017186
CP015281
Gammaproteobacteria
Photorhabdus laumondii subsp. laumondii DSPV002N [CP015281]
5229115
5229031
-
Leu
CAA
-
¡û
>C181019056
CP016303
Gammaproteobacteria
Candidatus Hamiltonella defensa [Bemisia tabaci] MEAM1 [CP016303]
591892
591808
-
Leu
CAA
-
¡û
>C181055085
CP021971
Gammaproteobacteria
Hafnia alvei CBA7135 [CP021971]
3870906
3870822
-
Leu
CAA
-
¡û
>C181092068
CP023962
Gammaproteobacteria
Yersinia frederiksenii FDAARGOS_417 [CP023962]
4768418
4768502
+
Leu
CAA
-
¡û
>C181105091
CP024780
Gammaproteobacteria
Pectobacterium brasiliense BZA12 [CP024780]
2825450
2825366
-
Leu
CAA
-
¡û
>C181108069
CP024900
Gammaproteobacteria
Photorhabdus laumondii subsp. laumondii DJC [CP024900]
5046145
5046061
-
Leu
CAA
-
¡û
>C181108146
CP024901
Gammaproteobacteria
Photorhabdus laumondii subsp. laumondii TT01 [CP024901]
5227819
5227735
-
Leu
CAA
-
¡û
>C181112979
CP025084
Gammaproteobacteria
Serratia sp. ATCC 39006 [CP025084]
34387
34303
-
Leu
CAA
-
¡û
>C181113053
CP025085
Gammaproteobacteria
Serratia sp. ATCC 39006 [CP025085]
34387
34303
-
Leu
CAA
-
¡û
>C181166202
CP028487
Gammaproteobacteria
Yersinia massiliensis GTA [CP028487]
4226045
4225961
-
Leu
CAA
-
¡û
>C181203479
LN854557
Gammaproteobacteria
Sodalis glossinidius str. 'morsitans' [LN854557]
3643560
3643476
-
Leu
CAA
-
¡û
>C181220958
LT897836
Gammaproteobacteria
Sodalis endosymbiont of Henestaris halophilus [LT897836]
1452681
1452764
+
Leu
CAA
-
¡û
>W141520025
JGVH01000094
Gammaproteobacteria
Photorhabdus temperata subsp. temperata Meg1 [JGVH]
17090
17174
+
Leu
CAA
[ENA]
¡û
>C191087426
CP032296
Gammaproteobacteria
Rahnella aquatilis ZF7 [CP032296]
4357616
4357532
-
Leu
CAA
-
¡û
>C191087958
CP032329
Gammaproteobacteria
Xenorhabdus nematophila YL001 [CP032329]
3763476
3763560
+
Leu
CAA
-
¡û
>C191126463
CP034481
Gammaproteobacteria
Rahnella aquatilis KM25 [CP034481]
4234760
4234676
-
Leu
CAA
-
¡û
>C191126539
CP034482
Gammaproteobacteria
Rahnella aquatilis KM12 [CP034482]
4234604
4234520
-
Leu
CAA
-
¡û
>C191126616
CP034483
Gammaproteobacteria
Rahnella aquatilis KM05 [CP034483]
4314940
4314856
-
Leu
CAA
-
¡û
>C191151805
CP036490
Gammaproteobacteria
Rahnella aquatilis MEM40 [CP036490]
1987527
1987443
-
Leu
CAA
-
¡û
>C191152032
CP036514
Gammaproteobacteria
Hafnia alvei PCM_1220 [CP036514]
3922197
3922113
-
Leu
CAA
-
¡û
>W09110793
ABVX01000041
Gammaproteobacteria
Pectobacterium brasiliense subsp. brasiliensis PBR1692 [ABVX]
37033
37117
+
Leu
CAA
[ENA]
¡û
>W141710403
JMPJ01000017
Gammaproteobacteria
Ewingella americana ATCC 33852 [JMPJ]
142323
142407
+
Leu
CAA
[ENA]
¡û
>W141710463
JMPK01000004
Gammaproteobacteria
Hafnia alvei ATCC 13337 [JMPK]
64121
64205
+
Leu
CAA
[ENA]
¡û
>W141710735
JMPO01000127
Gammaproteobacteria
Rahnella aquatilis CIP 78.65 = ATCC 33071 [JMPO]
11637
11553
-
Leu
CAA
[ENA]
¡û
>W141779176
JONO01000085
Gammaproteobacteria
Photorhabdus australis subsp. australis DSM 17609 [JONO]
9760
9844
+
Leu
CAA
[ENA]
¡û
>W141809943
JPSM01000013
Gammaproteobacteria
Pectobacterium brasiliense subsp. brasiliense [JPSM]
425874
425790
-
Leu
CAA
[ENA]
¡û
>W141810011
JPSN01000005
Gammaproteobacteria
Pectobacterium brasiliense subsp. brasiliense [JPSN]
253686
253770
+
Leu
CAA
[ENA]
¡û
>W141810114
JPSO01000062
Gammaproteobacteria
Pectobacterium brasiliense subsp. brasiliense [JPSO]
284205
284289
+
Leu
CAA
[ENA]
¡û
>W141816178
JQJR01000006
Gammaproteobacteria
Rahnella sp. WP5 [JQJR]
402273
402189
-
Leu
CAA
[ENA]
¡û
>W141821861
JQOD01000001
Gammaproteobacteria
Pectobacterium brasiliense subsp. brasiliense [JQOD]
1823144
1823060
-
Leu
CAA
[ENA]
¡û
>W141821922
JQOE01000001
Gammaproteobacteria
Pectobacterium brasiliense subsp. brasiliense [JQOE]
401589
401505
-
Leu
CAA
[ENA]
¡û
>W1910211952
FMIQ01000073
Gammaproteobacteria
Hafnia alvei GB001 [FMIQ]
4489
4405
-
Leu
CAA
[ENA]
¡û
>W1910282521
FRDB01000302
Gammaproteobacteria
Candidatus Sodalis sp. SoCistrobi [FRDB]
901
817
-
Leu
CAA
[ENA]
¡û
>W1910339733
FTLG01000033
Gammaproteobacteria
Xenorhabdus innexi [FTLG]
35325
35409
+
Leu
CAA
[ENA]
¡û
>W1910584915
JYDF01000022
Gammaproteobacteria
Rahnella sp. NRRL B-41462 [JYDF]
48737
48653
-
Leu
CAA
[ENA]
¡û
>W1910584978
JYDG01000059
Gammaproteobacteria
Rahnella sp. AN3-3W3 [JYDG]
22963
23047
+
Leu
CAA
[ENA]
¡û
>C09103188
CP001277
Gammaproteobacteria
Candidatus Hamiltonella defensa 5AT [Acyrthosiphon pisum] T5A [CP001277]
1443662
1443578
-
Leu
CAA
[Ensembl]
¡û
>W1910635661
LNJW01000097
Gammaproteobacteria
Candidatus Hamiltonella defensa [LNJW]
18192
18108
-
Leu
CAA
[ENA]
¡û
>W1910649346
LXYV01000744
Gammaproteobacteria
Ewingella americana BRK18a [LXYV]
1394
1310
-
Leu
CAA
[ENA]
¡û
>W1910649394
LXYV01000789
Gammaproteobacteria
Ewingella americana BRK18a [LXYV]
355457
355373
-
Leu
CAA
[ENA]
¡û
>C09108366
FM162591
Gammaproteobacteria
Photorhabdus asymbiotica [FM162591]
4638498
4638414
-
Leu
CAA
[Ensembl]
¡û
>C09108399
CP001657
Gammaproteobacteria
Pectobacterium carotovorum subsp. carotovorum PC1 [CP001657]
446324
446408
+
Leu
CAA
[Ensembl]
¡û
>W1910655813
MAEN01000001
Gammaproteobacteria
Rahnella victoriana BRK18a [MAEN]
4086116
4086200
+
Leu
CAA
[ENA]
¡û
>W1910696141
MEHU01000001
Gammaproteobacteria
Enterobacteriaceae bacterium Larv1_ips [MEHU]
588357
588441
+
Leu
CAA
[ENA]
¡û
>W1910751358
MJLZ01000033
Gammaproteobacteria
Brenneria alni NCPPB 3934 [MJLZ]
44215
44299
+
Leu
CAA
[ENA]
¡û
>W1910869880
NCQL01000049
Gammaproteobacteria
Pectobacterium carotovorum BF45 [NCQL]
38634
38550
-
Leu
CAA
[ENA]
¡û
>W1910869933
NCQM01000065
Gammaproteobacteria
Pectobacterium carotovorum BF20 [NCQM]
23494
23578
+
Leu
CAA
[ENA]
¡û
>W1910918752
NIBS01000001
Gammaproteobacteria
Xenorhabdus budapestensis DSM 16342 [NIBS]
252505
252589
+
Leu
CAA
[ENA]
¡û
>W1910918897
NIBT01000029
Gammaproteobacteria
Xenorhabdus ehlersii DSM 16337 [NIBT]
8473
8389
-
Leu
CAA
[ENA]
¡û
>W1910918923
NIBU01000008
Gammaproteobacteria
Xenorhabdus innexi DSM 16336 [NIBU]
320
236
-
Leu
CAA
[ENA]
¡û
>W1910919006
NIBV01000001
Gammaproteobacteria
Xenorhabdus szentirmaii DSM 16338 [NIBV]
457993
457909
-
Leu
CAA
[ENA]
¡û
>W1910932645
NITY01000003
Gammaproteobacteria
Xenorhabdus mauleonii DSM 17908 [NITY]
171875
171791
-
Leu
CAA
[ENA]
¡û
>W1910932715
NITZ01000001
Gammaproteobacteria
Xenorhabdus miraniensis DSM 17902 [NITZ]
186844
186760
-
Leu
CAA
[ENA]
¡û
>W1910932847
NIUA01000001
Gammaproteobacteria
Xenorhabdus szentirmaii US123 [NIUA]
2811403
2811319
-
Leu
CAA
[ENA]
¡û
>W1910939752
NJAH01000001
Gammaproteobacteria
Xenorhabdus sp. KK7.4 [NJAH]
337837
337921
+
Leu
CAA
[ENA]
¡û
>W1910939838
NJAI01000001
Gammaproteobacteria
Xenorhabdus hominickii DSM 17903 [NJAI]
419316
419232
-
Leu
CAA
[ENA]
¡û
>W1910939947
NJAJ01000031
Gammaproteobacteria
Xenorhabdus stockiae DSM 17904 [NJAJ]
13559
13475
-
Leu
CAA
[ENA]
¡û
>W1910940025
NJAK01000001
Gammaproteobacteria
Xenorhabdus ishibashii DSM 22670 [NJAK]
1321006
1320922
-
Leu
CAA
[ENA]
¡û
>W1910941309
NJCW01000005
Gammaproteobacteria
Xenorhabdus sp. KJ12.1 [NJCW]
168703
168619
-
Leu
CAA
[ENA]
¡û
>W1910941427
NJCX01000018
Gammaproteobacteria
Xenorhabdus kozodoii DSM 17907 [NJCX]
77154
77070
-
Leu
CAA
[ENA]
¡û
>W1910942249
NJGH01000057
Gammaproteobacteria
Xenorhabdus cabanillasii JM26 [NJGH]
20564
20648
+
Leu
CAA
[ENA]
¡û
>W1910993818
NKXM01000266
Gammaproteobacteria
Sodalis-like symbiont of Philaenus spumarius [NKXM]
1664
1748
+
Leu
CAA
[ENA]
¡û
>W1911071381
NMQR01000002
Gammaproteobacteria
Photorhabdus sp. CRCIA-P01 [NMQR]
42790
42706
-
Leu
CAA
[ENA]
¡û
>W1911237725
NSCD01000009
Gammaproteobacteria
Photorhabdus sp. S7-51 [NSCD]
102518
102602
+
Leu
CAA
[ENA]
¡û
>W1911237796
NSCE01000008
Gammaproteobacteria
Photorhabdus sp. S14-60 [NSCE]
102518
102602
+
Leu
CAA
[ENA]
¡û
>W1911237869
NSCF01000008
Gammaproteobacteria
Photorhabdus sp. S15-56 [NSCF]
102518
102602
+
Leu
CAA
[ENA]
¡û
>W1911237935
NSCG01000009
Gammaproteobacteria
Photorhabdus sp. S5P8-50 [NSCG]
40108
40024
-
Leu
CAA
[ENA]
¡û
>W1911238003
NSCH01000009
Gammaproteobacteria
Photorhabdus sp. S12-55 [NSCH]
40108
40024
-
Leu
CAA
[ENA]
¡û
>W1911238083
NSCI01000003
Gammaproteobacteria
Photorhabdus laumondii subsp. clarkei BOJ-47 [NSCI]
9185
9101
-
Leu
CAA
[ENA]
¡û
>W1911238164
NSCJ01000012
Gammaproteobacteria
Photorhabdus sp. S10-54 [NSCJ]
127544
127628
+
Leu
CAA
[ENA]
¡û
>W1911238232
NSCK01000011
Gammaproteobacteria
Photorhabdus sp. S9-53 [NSCK]
127544
127628
+
Leu
CAA
[ENA]
¡û
>W1911238302
NSCL01000012
Gammaproteobacteria
Photorhabdus sp. S8-52 [NSCL]
127544
127628
+
Leu
CAA
[ENA]
¡û
>W1911238358
NSCM01000003
Gammaproteobacteria
Photorhabdus bodei LJ24-63 [NSCM]
4114
4030
-
Leu
CAA
[ENA]
¡û
>W1911238435
NSCN01000008
Gammaproteobacteria
Photorhabdus sp. HUG-39 [NSCN]
1786
1702
-
Leu
CAA
[ENA]
¡û
>W1911239285
NSDJ01000001
Gammaproteobacteria
Rahnella variigena CIP 105588 [NSDJ]
1305685
1305769
+
Leu
CAA
[ENA]
¡û
>W1911545094
OUND01000003
Gammaproteobacteria
Arsenophonus endosymbiont of Aleurodicus floccissimus of Aleurodicus floccissimus ARAF [OUND]
170125
170209
+
Leu
CAA
[ENA]
¡û
>W1911632357
PUJX01000013
Gammaproteobacteria
Photorhabdus luminescens MEX47-22 [PUJX]
166663
166747
+
Leu
CAA
[ENA]
¡û
>W1911632408
PUJY01000005
Gammaproteobacteria
Photorhabdus khanii MEX20-17 [PUJY]
135252
135336
+
Leu
CAA
[ENA]
¡û
>W1911686115
QKVV01000001
Gammaproteobacteria
Rahnella variigena VCR3 [QKVV]
1265613
1265697
+
Leu
CAA
[ENA]
¡û
>W1911693603
QLTF01000001
Gammaproteobacteria
Rahnella sp. NFIX50 [QLTF]
530988
530904
-
Leu
CAA
[ENA]
¡û
>W1911811823
QZDG01000008
Gammaproteobacteria
Pectobacterium carotovorum S1.16.01.3K [QZDG]
78302
78386
+
Leu
CAA
[ENA]
¡û
>W1911811897
QZDI01000015
Gammaproteobacteria
Pectobacterium carotovorum S4.16.03.1C [QZDI]
78302
78386
+
Leu
CAA
[ENA]
¡û
>W1810075406
PEHM01000009
Gammaproteobacteria
Yersinia massiliensis SCPM-O-B-8024 [PEHM]
1977
1893
-
Leu
CAA
[ENA]
¡û
>W1810160143
PJDL01000003
Gammaproteobacteria
Pectobacterium brasiliense subsp. brasiliense F157 [PJDL]
287105
287021
-
Leu
CAA
[ENA]
¡û
>W1810160245
PJDM01000039
Gammaproteobacteria
Pectobacterium brasiliense subsp. brasiliense F152 [PJDM]
312
396
+
Leu
CAA
[ENA]
¡û
>W1810239914
PPSR01000004
Gammaproteobacteria
Rahnella aquatilis DLL7529 [PPSR]
219591
219675
+
Leu
CAA
[ENA]
¡û
>W1810339357
PUWT01000008
Gammaproteobacteria
Photorhabdus hindustanensis H1 [PUWT]
158469
158553
+
Leu
CAA
[ENA]
¡û
>W1810339482
PUWU01000062
Gammaproteobacteria
Photorhabdus luminescens H3 [PUWU]
20339
20255
-
Leu
CAA
[ENA]
¡û
>W1810339534
PUWV01000047
Gammaproteobacteria
Photorhabdus luminescens H4 [PUWV]
21216
21132
-
Leu
CAA
[ENA]
¡û
>W1810339549
PUWW01000003
Gammaproteobacteria
Photorhabdus luminescens H5 [PUWW]
28075
27991
-
Leu
CAA
[ENA]
¡û
>W1810339609
PUWX01000009
Gammaproteobacteria
Photorhabdus luminescens H7 [PUWX]
1334
1418
+
Leu
CAA
[ENA]
¡û
>W1810424297
PYUJ01000023
Gammaproteobacteria
Serratia sp. S1B [PYUJ]
82287
82371
+
Leu
CAA
[ENA]
¡û
>W1810543403
QDKI01000008
Gammaproteobacteria
Brenneria roseae subsp. roseae LMG 27714 [QDKI]
5660
5576
-
Leu
CAA
[ENA]
¡û
>W1810543474
QDKJ01000005
Gammaproteobacteria
Brenneria roseae subsp. americana LMG 27715 [QDKJ]
174964
175048
+
Leu
CAA
[ENA]
¡û
>W1810627526
QHMC01000004
Gammaproteobacteria
Pectobacterium carotovorum subsp. carotovorum ATCC 39048 [QHMC]
97708
97624
-
Leu
CAA
[ENA]
¡û
>W1810744585
QOVA01000002
Gammaproteobacteria
Edaphovirga cremea DSM 105170 [QOVA]
93173
93257
+
Leu
CAA
[ENA]
¡û
>W1810861700
QTUB01000001
Gammaproteobacteria
Xenorhabdus cabanillasii DSM 17905 [QTUB]
465718
465802
+
Leu
CAA
[ENA]
¡û
>C151009215
CP006568
Gammaproteobacteria
Candidatus Sodalis pierantonius str. SOPE [CP006568]
2236202
2236118
-
Leu
CAA
[Ensembl]
¡û
>C151009275
CP006569
Gammaproteobacteria
Sodalis praecaptivus HS1 [CP006569]
4377019
4376935
-
Leu
CAA
[Ensembl]
¡û
>C151057778
CP009706
Gammaproteobacteria
Hafnia alvei FB1 [CP009706]
4257145
4257061
-
Leu
CAA
[Ensembl]
¡û
>C151076887
CP011104
Gammaproteobacteria
Photorhabdus thracensis DSM 15199 [CP011104]
2460976
2461060
+
Leu
CAA
[Ensembl]
¡û
>C151098244
FO704550
Gammaproteobacteria
Xenorhabdus doucetiae FRM16 [FO704550]
624852
624768
-
Leu
CAA
[Ensembl]
¡û
>C151098249
FO704551
Gammaproteobacteria
Xenorhabdus poinarii G6 [FO704551]
385833
385917
+
Leu
CAA
[Ensembl]
¡û
>C151098373
FO818637
Gammaproteobacteria
Xenorhabdus bovienii CS03 [FO818637]
4211842
4211758
-
Leu
CAA
[Ensembl]
¡û
>C151103935
LN681227
Gammaproteobacteria
Xenorhabdus nematophila AN6/1 [LN681227]
4092230
4092146
-
Leu
CAA
[Ensembl]
¡û
>W1510058848
CCVN01000047
Gammaproteobacteria
Candidatus Hamiltonella defensa defensa [Bemisia tabaci] [CCVN]
16093
16009
-
Leu
CAA
[ENA]
¡û
>W1510059535
CCWM01000432
Gammaproteobacteria
Xenorhabdus nematophila str. Anatoliense [CCWM]
12374
12290
-
Leu
CAA
[ENA]
¡û
>W1510060109
CCWW01000059
Gammaproteobacteria
Xenorhabdus nematophila str. Websteri [CCWW]
2019
1935
-
Leu
CAA
[ENA]
¡û
>W1510060111
CCWW01000082
Gammaproteobacteria
Xenorhabdus nematophila str. Websteri [CCWW]
2019
1935
-
Leu
CAA
[ENA]
¡û
>W1510140478
CGCB01000001
Gammaproteobacteria
Yersinia frederiksenii 3400/83 [CGCB]
436708
436624
-
Leu
CAA
[ENA]
¡û
>W1510140932
CGCI01000010
Gammaproteobacteria
Yersinia frederiksenii FCF467 [CGCI]
145091
145175
+
Leu
CAA
[ENA]
¡û
>C10114131
FN667741
Gammaproteobacteria
Xenorhabdus bovienii SS-2004 [FN667741]
454969
455053
+
Leu
CAA
[Ensembl]
¡û
>C10114302
FN667742
Gammaproteobacteria
Xenorhabdus nematophila ATCC 19061 [FN667742]
4092716
4092632
-
Leu
CAA
[Ensembl]
¡û
>W1510460032
CPZP01000041
Gammaproteobacteria
Yersinia frederiksenii IP23698 [CPZP]
13242
13158
-
Leu
CAA
[ENA]
¡û
>W1510467077
CQEN01000004
Gammaproteobacteria
Yersinia frederiksenii FE80988 [CQEN]
105300
105216
-
Leu
CAA
[ENA]
¡û
>W1510570623
CTJA01000001
Gammaproteobacteria
Yersinia frederiksenii 120/02 [CTJA]
144003
144087
+
Leu
CAA
[ENA]
¡û
>W1510572947
CTKH01000002
Gammaproteobacteria
Yersinia frederiksenii 112/02 [CTKH]
492664
492580
-
Leu
CAA
[ENA]
¡û
>W1510668981
CWJI01000002
Gammaproteobacteria
Yersinia intermedia R148 [CWJI]
492231
492147
-
Leu
CAA
[ENA]
¡û
>C11116848
FM162591
Gammaproteobacteria
Photorhabdus asymbiotica [FM162591]
4638498
4638414
-
Leu
CAA
[Ensembl]
¡û
>W1511335026
JQOC01000006
Gammaproteobacteria
Photorhabdus luminescens LN2 [JQOC]
237097
237181
+
Leu
CAA
[ENA]
¡û
>C11118356
CP002505
Gammaproteobacteria
Rahnella aceris Y9602 [CP002505]
4214556
4214472
-
Leu
CAA
[Ensembl]
¡û
>W1511347715
JRJV01000138
Gammaproteobacteria
Xenorhabdus nematophila C2-3 [JRJV]
10904
10988
+
Leu
CAA
[ENA]
¡û
>W1511349355
JRLH01000001
Gammaproteobacteria
Candidatus Arsenophonus nilaparvatae str. Hangzhou of Nilaparvata lugens [JRLH]
171672
171756
+
Leu
CAA
[ENA]
¡û
>W1511389801
JSXC01000003
Gammaproteobacteria
Pectobacterium fontis M022 [JSXC]
86974
87058
+
Leu
CAA
[ENA]
¡û
>W1511399549
JTET01000016
Gammaproteobacteria
Hafnia alvei DSM 30098 [JTET]
76446
76362
-
Leu
CAA
[ENA]
¡û
>W1511399613
JTEU02000006
Gammaproteobacteria
Hafnia alvei DSM 30099 [JTEU]
129058
129142
+
Leu
CAA
[ENA]
¡û
>W1511401200
JTHJ02000244
Gammaproteobacteria
Photorhabdus luminescens NBAII HiPL101 [JTHJ]
10714
10798
+
Leu
CAA
[ENA]
¡û
>W1511401216
JTHK01000014
Gammaproteobacteria
Xenorhabdus sp. NBAII XenSa04 [JTHK]
1651
1567
-
Leu
CAA
[ENA]
¡û
>W1511433708
JUHL01000001
Gammaproteobacteria
Rahnella aquatilis OV588 [JUHL]
254915
254999
+
Leu
CAA
[ENA]
¡û
>W1511433791
JUHM01000004
Gammaproteobacteria
Rahnella aquatilis OV744 [JUHM]
167577
167493
-
Leu
CAA
[ENA]
¡û
>W1511435367
JUJB01000016
Gammaproteobacteria
Pectobacterium brasiliense subsp. brasiliense YC D49 [JUJB]
88888
88972
+
Leu
CAA
[ENA]
¡û
>W1511435380
JUJC01000001
Gammaproteobacteria
Pectobacterium brasiliense subsp. brasiliense YC D52 [JUJC]
189116
189200
+
Leu
CAA
[ENA]
¡û
>W1511435479
JUJD01000007
Gammaproteobacteria
Pectobacterium brasiliense subsp. brasiliense YC D62 [JUJD]
168949
169033
+
Leu
CAA
[ENA]
¡û
>W1511435518
JUJE01000002
Gammaproteobacteria
Pectobacterium brasiliense subsp. brasiliense YC D64 [JUJE]
163698
163782
+
Leu
CAA
[ENA]
¡û
>W1511435596
JUJF01000008
Gammaproteobacteria
Pectobacterium brasiliense subsp. carotovorum BC S2 [JUJF]
175588
175672
+
Leu
CAA
[ENA]
¡û
>W1511435676
JUJG01000005
Gammaproteobacteria
Pectobacterium carotovorum subsp. carotovorum YC D57 [JUJG]
176745
176829
+
Leu
CAA
[ENA]
¡û
>W1511435707
JUJH01000001
Gammaproteobacteria
Pectobacterium brasiliense subsp. carotovorum YC D46 [JUJH]
170475
170559
+
Leu
CAA
[ENA]
¡û
>W1511435845
JUJJ01000005
Gammaproteobacteria
Pectobacterium brasiliense subsp. brasiliense YC D21 [JUJJ]
178908
178992
+
Leu
CAA
[ENA]
¡û
>W1511435978
JUJL01000002
Gammaproteobacteria
Pectobacterium brasiliense subsp. brasiliense YC T31 [JUJL]
163926
164010
+
Leu
CAA
[ENA]
¡û
>W1511436034
JUJM01000002
Gammaproteobacteria
Pectobacterium brasiliense subsp. brasiliense YC T3 [JUJM]
163687
163771
+
Leu
CAA
[ENA]
¡û
>W1511436109
JUJN01000005
Gammaproteobacteria
Pectobacterium brasiliense subsp. brasiliense YC D65 [JUJN]
181027
181111
+
Leu
CAA
[ENA]
¡û
>W1511436256
JUJP01000005
Gammaproteobacteria
Pectobacterium brasiliense subsp. carotovorum YC D60 [JUJP]
77980
78064
+
Leu
CAA
[ENA]
¡û
>W1511436401
JUJR01000007
Gammaproteobacteria
Pectobacterium carotovorum subsp. carotovorum BC T2 [JUJR]
77613
77697
+
Leu
CAA
[ENA]
¡û
>W1511436534
JUJT01000015
Gammaproteobacteria
Pectobacterium brasiliense subsp. carotovorum BC D6 [JUJT]
7877
7961
+
Leu
CAA
[ENA]
¡û
>W1511510864
JXSK01000010
Gammaproteobacteria
Photorhabdus luminescens subsp. luminescens DSM 3368 [JXSK]
115513
115597
+
Leu
CAA
[ENA]
¡û
>W1511512717
JXUR02000390
Gammaproteobacteria
Photorhabdus luminescens NBAII Hb105 [JXUR]
2880
2796
-
Leu
CAA
[ENA]
¡û
>W1511586384
LAZF01000023
Gammaproteobacteria
Obesumbacterium proteus LE8 [LAZF]
109508
109424
-
Leu
CAA
[ENA]
¡û
>W1511586417
LAZG01000007
Gammaproteobacteria
Hafnia alvei ATCC 29926 [LAZG]
149692
149776
+
Leu
CAA
[ENA]
¡û
>W1511638093
LDNM01000120
Gammaproteobacteria
Xenorhabdus griffiniae BMMCB [LDNM]
18167
18083
-
Leu
CAA
[ENA]
¡û
>W1511678274
LFCV01000107
Gammaproteobacteria
Xenorhabdus khoisanae MCB [LFCV]
19585
19669
+
Leu
CAA
[ENA]
¡û
>W1511705416
LGRF01000002
Gammaproteobacteria
Pectobacterium brasiliense subsp. brasiliense BD255 [LGRF]
187122
187206
+
Leu
CAA
[ENA]
¡û
>C121009647
CP003244
Gammaproteobacteria
Rahnella aquatilis CIP 78.65 = ATCC 33071 [CP003244]
4239334
4239250
-
Leu
CAA
[Ensembl]
¡û
>C121012501
CP003403
Gammaproteobacteria
Rahnella aquatilis HX2 [CP003403]
4308497
4308413
-
Leu
CAA
[Ensembl]
¡û
>C121014472
CP003546
Gammaproteobacteria
secondary endosymbiont of Ctenarytaina eucalypti [CP003546]
1361191
1361107
-
Leu
CAA
[Ensembl]
¡û
>C161074172
CP014608
Gammaproteobacteria
Obesumbacterium proteus DSM 2777 [CP014608]
1251567
1251651
+
Leu
CAA
-
¡û
>C161086841
CP015379
Gammaproteobacteria
Hafnia alvei HUMV-5920 [CP015379]
2088301
2088385
+
Leu
CAA
-
¡û
>C161108674
LN999833
Gammaproteobacteria
Candidatus Doolittlea endobia [LN999833]
331225
331140
-
Leu
CAA
[Ensembl]
¡û
>W1610005760
ALIU01000005
Gammaproteobacteria
Pectobacterium brasiliense subsp. brasiliensis ICMP 19477 [ALIU]
1195902
1195818
-
Leu
CAA
[ENA]
¡û
>W1610032512
AZAB02000076
Gammaproteobacteria
Photorhabdus luminescens NBAII H75HRPL105 [AZAB]
10699
10783
+
Leu
CAA
[ENA]
¡û
>W121063697
AJLH01000016
Gammaproteobacteria
Candidatus Hamiltonella defensa defensa MED (Bemisia tabaci) [AJLH]
14084
14000
-
Leu
CAA
[ENA]
¡û
>C131006413
CP003776
Gammaproteobacteria
Pectobacterium carotovorum subsp. carotovorum PCC21 [CP003776]
448784
448868
+
Leu
CAA
[Ensembl]
¡û
>W1610596632
LECR01000092
Gammaproteobacteria
Sodalis-like endosymbiont of Proechinophthirus fluctus [LECR]
32854
32770
-
Leu
CAA
[ENA]
¡û
>W1610657241
LJPB01000058
Gammaproteobacteria
Photorhabdus laumondii subsp. laumondii [LJPB]
544
460
-
Leu
CAA
[ENA]
¡û
>W1610680042
LKKQ01000078
Gammaproteobacteria
Pectobacterium brasiliense subsp. brasiliense [LKKQ]
191325
191409
+
Leu
CAA
[ENA]
¡û
>W1610789796
LOIC01000095
Gammaproteobacteria
Photorhabdus namnaonensis luminescens [LOIC]
133121
133205
+
Leu
CAA
[ENA]
¡û
>W1610794666
LOMY01000202
Gammaproteobacteria
Photorhabdus australis subsp. australis [LOMY]
196875
196959
+
Leu
CAA
[ENA]
¡û
>W1610982221
LWDB01000010
Gammaproteobacteria
Proteus mirabilis [LWDB]
769
685
-
Leu
CAA
[ENA]
¡û
>W1610986446
LWGQ01000167
Gammaproteobacteria
Photorhabdus luminescens [LWGQ]
78226
78142
-
Leu
CAA
[ENA]
¡û
>W1610990532
LWMI01000007
Gammaproteobacteria
Candidatus Arsenophonus triatominarum [LWMI]
318996
319080
+
Leu
CAA
[ENA]
¡û
>W1610994951
LXEX01000016
Gammaproteobacteria
Obesumbacterium proteus ATCC 12841 [LXEX]
87924
87840
-
Leu
CAA
[ENA]
¡û
>W1710005521
ALIU01000005
Gammaproteobacteria
Pectobacterium brasiliense subsp. brasiliensis ICMP 19477 [ALIU]
1195902
1195818
-
Leu
CAA
[ENA]
¡û
>W1710508716
FMWJ01000008
Gammaproteobacteria
Photorhabdus luminescens [FMWJ]
133465
133549
+
Leu
CAA
[ENA]
¡û
>W1710513296
FNAA01000013
Gammaproteobacteria
Proteus mirabilis [FNAA]
89620
89704
+
Leu
CAA
[ENA]
¡û
>W1710565499
FORG01000003
Gammaproteobacteria
Xenorhabdus mauleonii [FORG]
171871
171787
-
Leu
CAA
[ENA]
¡û
>W1710570987
FOVO01000001
Gammaproteobacteria
Xenorhabdus japonica [FOVO]
207917
208001
+
Leu
CAA
[ENA]
¡û
>W1710578198
FPBJ01000044
Gammaproteobacteria
Xenorhabdus koppenhoeferi [FPBJ]
5109
5025
-
Leu
CAA
[ENA]
¡û
>W1710717637
LECR01000092
Gammaproteobacteria
Sodalis-like endosymbiont of Proechinophthirus fluctus [LECR]
32854
32770
-
Leu
CAA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
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(Sample source for ENV)
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Start
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Direction
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Download Sequence
Representative sequence of each cluster
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