tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.99726 (69 seq.)
>W1710785724 LJIC01000091 Alphaproteobacteria Rhodopseudomonas sp. AAP120 [LJIC] 8063 7979 - Leu TAG [ENA] ¡û
>W1710882219 LMTR01000012 Alphaproteobacteria Hyphomicrobium sulfonivorans [LMTR] 7187 7271 + Leu TAG [ENA] ¡û
>W1711169184 LVYV01000003 Alphaproteobacteria Tardiphaga robiniae [LVYV] 193788 193704 - Leu TAG [ENA] ¡û
>W1711502234 MKSM01000018 Alphaproteobacteria Nitrobacter sp. 62-23 [MKSM] 5340 5256 - Leu TAG [ENA] ¡û
>W1711783530 MVOD01000020 Alphaproteobacteria Rhodopseudomonas palustris [MVOD] 21243 21327 + Leu TAG [ENA] ¡û
>W1711795371 MWPQ01000039 Alphaproteobacteria Nitrobacter vulgaris [MWPQ] 81407 81323 - Leu TAG [ENA] ¡û
>W131226875 AUES01000004 Alphaproteobacteria Bradyrhizobium sp. URHA0002 [AUES] 151021 151105 + Leu TAG [ENA] ¡û
>C014946 CP000319 Alphaproteobacteria Nitrobacter hamburgensis X14 [CP000319] 2482912 2482828 - Leu TAG [Ensembl] ¡û
>C015379 CP000115 Alphaproteobacteria Nitrobacter winogradskyi Nb-255 [CP000115] 2085621 2085537 - Leu TAG [Ensembl] ¡û
>C018890 CP000301 Alphaproteobacteria Rhodopseudomonas palustris [CP000301] 2593815 2593899 + Leu TAG [Ensembl] ¡û
>C019008 BX571963 Alphaproteobacteria Rhodopseudomonas palustris [BX571963] 3356522 3356438 - Leu TAG [Ensembl] ¡û
>C019039 CP000250 Alphaproteobacteria Rhodopseudomonas palustris HaA2 [CP000250] 2939436 2939520 + Leu TAG [Ensembl] ¡û
>w022253 AAWJ01000001 Alphaproteobacteria Parvibaculum lavamentivorans DS-1 [AAWJ] 3402924 3403008 + Leu TAG [ENA] ¡û
>w013002 AAMY01000019 Alphaproteobacteria Nitrobacter sp. Nb-311A [AAMY] 57859 57943 + Leu TAG [ENA] ¡û
>WENV180252401 OBEQ010447050 [OBEQ] groundwater metagenome; groundwater 754 838 + Leu TAG [ENA] ¢þ
>WENV180282803 OBIC01007842 [OBIC] beach sand metagenome; beach sand 201 285 + Leu TAG [ENA] ¢þ
>WENV180293924 OBIY01004763 [OBIY] beach sand metagenome; beach sand 1159 1075 - Leu TAG [ENA] ¢þ
>WENV180309864 OBJS01064466 [OBJS] beach sand metagenome; beach sand 185 101 - Leu TAG [ENA] ¢þ
>WENV181234649 OFEU01000931 [OFEU] microbial mat metagenome; enrichment culture HLUCC-O from microbial mat sample; contains cyanobacterium Phormidium 9195 9111 - Leu TAG [ENA] ¢þ
>WENV181313957 OFJI01000840 [OFJI] marine metagenome; sea ice 883 967 + Leu TAG [ENA] ¢þ
>WENV181324482 OFLE01025472 [OFLE] marine metagenome; sea ice 132 216 + Leu TAG [ENA] ¢þ
>WENV181401908 OFTX01019191 [OFTX] sludge metagenome; sludge 273 357 + Leu TAG [ENA] ¢þ
>W08007835 ABKN01000001 Alphaproteobacteria Afipia carboxidovorans OM5 [ABKN] 1822654 1822738 + Leu TAG [ENA] ¡û
>C08007351 CP000774 Alphaproteobacteria Parvibaculum lavamentivorans DS-1 [CP000774] 3455422 3455341 - Leu TAG [Ensembl] ¡û
>W141223320 BADD01000501 Alphaproteobacteria Rhodopseudomonas sp. B29 [BADD] 6945 6861 - Leu TAG [ENA] ¡û
>WENV183636440 OOKD01001298 [OOKD] human gut metagenome; Skin biopsy 2414 2498 + Leu TAG [ENA] ¢þ
>WENV183740656 PJUF01005503 [PJUF] feces metagenome; Chicken feces (3) enriched on wood chips 315 399 + Leu TAG [ENA] ¢þ
>WENV183745193 PJUL01005116 [PJUL] feces metagenome; Chicken feces enriched on filter paper 720 636 - Leu TAG [ENA] ¢þ
>WENV170016303 AZIJ01022871 [AZIJ] marine sediment metagenome; enrichment culture of sample MGS-ElMAX(UA) from oil contaminated site at the El-Max 2128 2044 - Leu TAG [ENA] ¢þ
>WENV170404013 CEUF01171670 [CEUF] marine metagenome genome assembly TARA_138_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 562 478 - Leu TAG [ENA] ¢þ
>WENV170469245 CEVF01097443 [CEVF] marine metagenome genome assembly TARA_124_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 42599 42683 + Leu TAG [ENA] ¢þ
>WENV170485118 CEVN01075951 [CEVN] marine metagenome genome assembly TARA_142_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 850 934 + Leu TAG [ENA] ¢þ
>WENV170529483 CEWJ01135652 [CEWJ] marine metagenome genome assembly TARA_128_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1598 1682 + Leu TAG [ENA] ¢þ
>WENV170550844 CXWF01036544 [CXWF] marine metagenome genome assembly TARA_064_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3787 3703 - Leu TAG [ENA] ¢þ
>WENV170650115 JRYD01012127 [JRYD] activated sludge metagenome; activated biomass in a lab-scale reactor treating industrial wastewater at 2 ppm DO 11508 11592 + Leu TAG [ENA] ¢þ
>WENV170654940 JRYL01108603 [JRYL] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater from different 275 191 - Leu TAG [ENA] ¢þ
>WENV170807525 MDSW01100063 [MDSW] marine metagenome; seawater 89017 88933 - Leu TAG [ENA] ¢þ
>WENV170889352 MDTC01273593 [MDTC] marine metagenome; seawater 7524 7608 + Leu TAG [ENA] ¢þ
>WENV170893387 MDTD01051056 [MDTD] marine metagenome; seawater 89017 88933 - Leu TAG [ENA] ¢þ
>WENV170941375 MDTG01359443 [MDTG] marine metagenome; seawater 26829 26913 + Leu TAG [ENA] ¢þ
>WENV170963061 MRWG01000007 [MRWG] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell 91260 91344 + Leu TAG [ENA] ¢þ
>C181041920 CP019967 Alphaproteobacteria Rhodopseudomonas palustris YSC3 [CP019967] 3296580 3296496 - Leu TAG - ¡û
>W09103022 AAIS01000006 Alphaproteobacteria Nitrobacter hamburgensis X14 [AAIS] 143348 143432 + Leu TAG [ENA] ¡û
>W09104373 AALQ01000003 Alphaproteobacteria Rhodopseudomonas palustris HaA2 [AALQ] 609137 609053 - Leu TAG [ENA] ¡û
>W09104412 AALR01000004 Alphaproteobacteria Rhodopseudomonas palustris BisB18 [AALR] 223995 223911 - Leu TAG [ENA] ¡û
>W09107578 ABJR01000001 Alphaproteobacteria Rhodopseudomonas palustris TIE-1 [ABJR] 1552495 1552411 - Leu TAG [ENA] ¡û
>W1910182845 BJNF01000050 Alphaproteobacteria Nitrobacter winogradskyi NBRC 14297 [BJNF] 31667 31583 - Leu TAG [ENA] ¡û
>W1910548951 FZOX01000002 Alphaproteobacteria Tardiphaga sp. OK246 [FZOX] 1118635 1118551 - Leu TAG [ENA] ¡û
>C09108134 CP001196 Alphaproteobacteria Afipia carboxidovorans OM5 OM5; ATCC 49405 [CP001196] 1822340 1822424 + Leu TAG - ¡û
>W1911219131 NRSI01000001 Alphaproteobacteria Rhodopseudomonas palustris DSM 126 [NRSI] 234483 234567 + Leu TAG [ENA] ¡û
>W1911760571 QWVU01000030 Alphaproteobacteria Rhodopseudomonas palustris R1 [QWVU] 68978 68894 - Leu TAG [ENA] ¡û
>W1911809174 QYYC01000036 Alphaproteobacteria Rhodopseudomonas palustris 2.1.37 [QYYC] 21284 21368 + Leu TAG [ENA] ¡û
>W1810576969 QENW01000013 Alphaproteobacteria Tardiphaga sp. OV697 [QENW] 116730 116814 + Leu TAG [ENA] ¡û
>W1810679430 QKQS01000013 Alphaproteobacteria Rhodopseudomonas palustris XCP [QKQS] 256779 256695 - Leu TAG [ENA] ¡û
>W1810784352 QRAQ01000001 Alphaproteobacteria Tardiphaga sp. CF115 [QRAQ] 36275 36359 + Leu TAG [ENA] ¡û
>W1810787489 QRDT01000001 Alphaproteobacteria Rhodopseudomonas pentothenatexigens JA575 [QRDT] 12835 12919 + Leu TAG [ENA] ¡û
>W1810884386 QUMP01000001 Alphaproteobacteria Rhodopseudomonas thermotolerans JA576,NBRC 108863,KCTC 15144 [QUMP] 12835 12919 + Leu TAG [ENA] ¡û
>W10112838 ADFI01000030 Alphaproteobacteria Rhodopseudomonas palustris DX-1 [ADFI] 17214 17130 - Leu TAG [ENA] ¡û
>C10110770 CP001096 Alphaproteobacteria Rhodopseudomonas palustris TIE-1 [CP001096] 3567960 3567876 - Leu TAG [Ensembl] ¡û
>C11116284 CP002821 Alphaproteobacteria Afipia carboxidovorans OM4 [CP002821] 2303267 2303183 - Leu TAG [Ensembl] ¡û
>W11116065 ADFI01000030 Alphaproteobacteria Rhodopseudomonas palustris DX-1 [ADFI] 17214 17130 - Leu TAG [ENA] ¡û
>C11118751 CP002418 Alphaproteobacteria Rhodopseudomonas palustris [CP002418] 2671639 2671723 + Leu TAG [Ensembl] ¡û
>C121003004 CP002826 Alphaproteobacteria Afipia carboxidovorans OM5 [CP002826] 2302146 2302062 - Leu TAG - ¡û
>W1610649530 LJIC01000091 Alphaproteobacteria Rhodopseudomonas sp. AAP120 [LJIC] 8063 7979 - Leu TAG [ENA] ¡û
>W1610744145 LMTR01000012 Alphaproteobacteria Hyphomicrobium sulfonivorans [LMTR] 7187 7271 + Leu TAG [ENA] ¡û
>W1610978979 LVYV01000003 Alphaproteobacteria Tardiphaga robiniae [LVYV] 193788 193704 - Leu TAG [ENA] ¡û
>W1710535150 FNSI01000001 Alphaproteobacteria Beijerinckia sp. 28-YEA-48 [FNSI] 2482097 2482013 - Leu TAG [ENA] ¡û
>W1710536656 FNTI01000002 Alphaproteobacteria Bradyrhizobium lablabi [FNTI] 65446 65530 + Leu TAG [ENA] ¡û
>W1710568417 FOTP01000002 Alphaproteobacteria Bradyrhizobium sp. NFR13 [FOTP] 49440 49524 + Leu TAG [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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