tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001806)

Anticodon = CAA

HIT: 22 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.29540 (6 seq.)
>WENV170620179 FUWD013026865 [FUWD] metagenome; unknown 6410 6499 + Leu CAA [ENA] ¢þ
>WENV170628315 FUWD013244687 [FUWD] metagenome; unknown 6410 6499 + Leu CAA [ENA] ¢þ
>SRA1026080 SRR035085.139674 454 Sequencing (SRP001806) 133 44 - Leu CAA [SRA]
>SRA1026102 SRR035085.143604 454 Sequencing (SRP001806) 133 44 - Leu CAA [SRA]
>SRA1041806 SRR035091.297564 454 Sequencing (SRP001812) 226 137 - Leu CAA [SRA]
>SRA1048859 SRR035094.265095 454 Sequencing (SRP001815) 158 247 + Leu CAA [SRA]
Identical group No.46721 (10 seq.)
>WENV170621357 FUWD013056597 [FUWD] metagenome; unknown 842 930 + Leu CAA [ENA] ¢þ
>WENV170629536 FUWD013273001 [FUWD] metagenome; unknown 842 930 + Leu CAA [ENA] ¢þ
>SRA1017677 SRR035082.179412 454 Sequencing (SRP001803) 400 488 + Leu CAA [SRA]
>SRA1018518 SRR035082.303820 454 Sequencing (SRP001803) 509 421 - Leu CAA [SRA]
>SRA1026139 SRR035085.151257 454 Sequencing (SRP001806) 375 287 - Leu CAA [SRA]
>SRA1026648 SRR035085.249103 454 Sequencing (SRP001806) 375 287 - Leu CAA [SRA]
>SRA1029040 SRR035087.64053 454 Sequencing (SRP001808) 436 348 - Leu CAA [SRA]
>SRA1029298 SRR035087.104584 454 Sequencing (SRP001808) 438 350 - Leu CAA [SRA]
>SRA1035824 SRR035089.383553 454 Sequencing (SRP001810) 198 110 - Leu CAA [SRA]
>SRA1048707 SRR035094.232403 454 Sequencing (SRP001815) 187 275 + Leu CAA [SRA]
Identical group No.46728 (6 seq.)
>WENV170621236 FUWD013053264 [FUWD] metagenome; unknown 976 888 - Leu CAA [ENA] ¢þ
>WENV170629416 FUWD013269765 [FUWD] metagenome; unknown 976 888 - Leu CAA [ENA] ¢þ
>WENV170693689 LGVC01043428 [LGVC] marine sediment metagenome; sample #5133, Elevator 3A push core 47, collected at Hydrate Ridge North during Jason II dive 989 901 - Leu CAA [ENA] ¢þ
>SRA1026710 SRR035085.267646 454 Sequencing (SRP001806) 223 135 - Leu CAA [SRA]
>SRA1035823 SRR035089.383017 454 Sequencing (SRP001810) 104 16 - Leu CAA [SRA]
>SRA1036724 SRR035089.595065 454 Sequencing (SRP001810) 230 142 - Leu CAA [SRA]
Identical group No.56217 (1 seq.)
>SRA1025779 SRR035085.81594 454 Sequencing (SRP001806) 313 229 - Leu CAA [SRA]
Identical group No.56227 (1 seq.)
>SRA1026175 SRR035085.157891 454 Sequencing (SRP001806) 76 163 + Leu CAA [SRA]
Identical group No.73247 (10 seq.)
>WENV170623282 FUWD013144322 [FUWD] metagenome; unknown 727 813 + Leu CAA [ENA] ¢þ
>WENV170623297 FUWD013144967 [FUWD] metagenome; unknown 1093 1007 - Leu CAA [ENA] ¢þ
>WENV170631541 FUWD013356340 [FUWD] metagenome; unknown 727 813 + Leu CAA [ENA] ¢þ
>WENV170631558 FUWD013356956 [FUWD] metagenome; unknown 1093 1007 - Leu CAA [ENA] ¢þ
>SRA1025643 SRR035085.55437 454 Sequencing (SRP001806) 322 408 + Leu CAA [SRA]
>SRA1026031 SRR035085.130854 454 Sequencing (SRP001806) 92 178 + Leu CAA [SRA]
>SRA1030735 SRR035087.322470 454 Sequencing (SRP001808) 353 267 - Leu CAA [SRA]
>SRA1034526 SRR035089.115747 454 Sequencing (SRP001810) 5 91 + Leu CAA [SRA]
>SRA1035673 SRR035089.352504 454 Sequencing (SRP001810) 360 446 + Leu CAA [SRA]
>SRA1043019 SRR035092.22698 454 Sequencing (SRP001813) 114 28 - Leu CAA [SRA]
Identical group No.73252 (8 seq.)
>WENV170612316 FUWD012571277 [FUWD] metagenome; unknown 267 353 + Leu CAA [ENA] ¢þ
>WENV170617217 FUWD012918475 [FUWD] metagenome; unknown 402 488 + Leu CAA [ENA] ¢þ
>WENV170627215 FUWD013232105 [FUWD] metagenome; unknown 12724 12810 + Leu CAA [ENA] ¢þ
>WENV170632904 FUWD013388446 [FUWD] metagenome; unknown 12724 12810 + Leu CAA [ENA] ¢þ
>SRA1025737 SRR035085.73260 454 Sequencing (SRP001806) 76 162 + Leu CAA [SRA]
>SRA1035263 SRR035089.270515 454 Sequencing (SRP001810) 221 307 + Leu CAA [SRA]
>SRA1048239 SRR035094.132666 454 Sequencing (SRP001815) 147 61 - Leu CAA [SRA]
>SRA1050276 SRR035095.227580 454 Sequencing (SRP001816) 283 197 - Leu CAA [SRA]
Identical group No.73255 (2 seq.)
>WENV170613233 FUWD012791329 [FUWD] metagenome; unknown 103 187 + Leu CAA [ENA] ¢þ
>SRA1025956 SRR035085.116283 454 Sequencing (SRP001806) 332 248 - Leu CAA [SRA]
Identical group No.73256 (2 seq.)
>SRA1026019 SRR035085.127558 454 Sequencing (SRP001806) 262 348 + Leu CAA [SRA]
>SRA1035920 SRR035089.404113 454 Sequencing (SRP001810) 412 326 - Leu CAA [SRA]
Identical group No.73266 (3 seq.)
>SRA1026307 SRR035085.183049 454 Sequencing (SRP001806) 244 330 + Leu CAA [SRA]
>SRA1026601 SRR035085.237665 454 Sequencing (SRP001806) 243 329 + Leu CAA [SRA]
>SRA1032742 SRR035088.92700 454 Sequencing (SRP001809) 49 135 + Leu CAA [SRA]
Identical group No.73272 (2 seq.)
>WENV181413325 OGCK01053336 [OGCK] hot springs metagenome; hot spring sediment 246 160 - Leu CAA [ENA] ¢þ
>SRA1026580 SRR035085.232569 454 Sequencing (SRP001806) 371 455 + Leu CAA [SRA]
Identical group No.73275 (1 seq.)
>SRA1026643 SRR035085.247717 454 Sequencing (SRP001806) 77 162 + Leu CAA [SRA]
Identical group No.99995 (1 seq.)
>SRA1025644 SRR035085.55528 454 Sequencing (SRP001806) 113 31 - Leu CAA [SRA]
Identical group No.99998 (1 seq.)
>SRA1025769 SRR035085.80118 454 Sequencing (SRP001806) 240 325 + Leu CAA [SRA]
Identical group No.100000 (1 seq.)
>SRA1025810 SRR035085.87490 454 Sequencing (SRP001806) 269 352 + Leu CAA [SRA]
Identical group No.100006 (2 seq.)
>WENV170605054 FUWD010444786 [FUWD] metagenome; unknown 6 91 + Leu CAA [ENA] ¢þ
>SRA1026063 SRR035085.134848 454 Sequencing (SRP001806) 230 315 + Leu CAA [SRA]
Identical group No.100015 (3 seq.)
>WENV183512842 OMKS01001539 [OMKS] sediment metagenome; hot spring sediment 234 152 - Leu CAA [ENA] ¢þ
>WENV183515573 OMKS01074323 [OMKS] sediment metagenome; hot spring sediment 733 651 - Leu CAA [ENA] ¢þ
>SRA1026498 SRR035085.217034 454 Sequencing (SRP001806) 157 242 + Leu CAA [SRA]
Identical group No.117988 (3 seq.)
>WENV170612476 FUWD012620146 [FUWD] metagenome; unknown 95 179 + Leu CAA [ENA] ¢þ
>SRA1026032 SRR035085.130881 454 Sequencing (SRP001806) 485 403 - Leu CAA [SRA]
>SRA1032291 SRR035087.596869 454 Sequencing (SRP001808) 235 151 - Leu CAA [SRA]
Identical group No.118006 (3 seq.)
>WENV170607862 FUWD010862434 [FUWD] metagenome; unknown 86 1 - Leu CAA [ENA] ¢þ
>WENV170974872 MTKY01078937 [MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 2481 2563 + Leu CAA [ENA] ¢þ
>SRA1026586 SRR035085.233360 454 Sequencing (SRP001806) 125 40 - Leu CAA [SRA]
Identical group No.118008 (1 seq.)
>SRA1026657 SRR035085.251280 454 Sequencing (SRP001806) 265 349 + Leu CAA [SRA]
Identical group No.177298 (1 seq.)
>SRA1025533 SRR035085.34839 454 Sequencing (SRP001806) 200 276 + Leu CAA [SRA]
Identical group No.282124 (1 seq.)
>SRA1026584 SRR035085.233255 454 Sequencing (SRP001806) 244 172 - Leu CAA [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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