tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001806)

Anticodon = GGG

HIT: 26 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.235077 (1 seq.)
>SRA1025928 SRR035085.111595 454 Sequencing (SRP001806) 217 293 + Pro GGG [SRA]
Identical group No.240802 (1 seq.)
>SRA1025893 SRR035085.104590 454 Sequencing (SRP001806) 108 34 - Pro GGG [SRA]
Identical group No.240803 (3 seq.)
>WENV170612538 FUWD012631210 [FUWD] metagenome; unknown 113 36 - Pro GGG [ENA]
>SRA1025905 SRR035085.106162 454 Sequencing (SRP001806) 201 124 - Pro GGG [SRA]
>SRA1042438 SRR035091.386612 454 Sequencing (SRP001812) 327 250 - Pro GGG [SRA]
Identical group No.240805 (1 seq.)
>SRA1025952 SRR035085.115642 454 Sequencing (SRP001806) 97 173 + Pro GGG [SRA]
Identical group No.240806 (4 seq.)
>WENV170611855 FUWD012420240 [FUWD] metagenome; unknown 143 220 + Pro GGG [ENA]
>SRA1025974 SRR035085.119832 454 Sequencing (SRP001806) 312 389 + Pro GGG [SRA]
>SRA1026555 SRR035085.226980 454 Sequencing (SRP001806) 311 388 + Pro GGG [SRA]
>SRA1030355 SRR035087.266622 454 Sequencing (SRP001808) 255 178 - Pro GGG [SRA]
Identical group No.240809 (1 seq.)
>SRA1025986 SRR035085.121512 454 Sequencing (SRP001806) 277 354 + Pro GGG [SRA]
Identical group No.240818 (2 seq.)
>WENV170698869 LGVF01436423 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 83 6 - Pro GGG [ENA]
>SRA1026258 SRR035085.174247 454 Sequencing (SRP001806) 185 262 + Pro GGG [SRA]
Identical group No.240839 (1 seq.)
>SRA1026680 SRR035085.257750 454 Sequencing (SRP001806) 30 107 + Pro GGG [SRA]
Identical group No.240842 (1 seq.)
>SRA1026741 SRR035085.277773 454 Sequencing (SRP001806) 254 180 - Pro GGG [SRA]
Identical group No.240844 (1 seq.)
>SRA1026762 SRR035085.283840 454 Sequencing (SRP001806) 350 273 - Pro GGG [SRA]
Identical group No.240845 (1 seq.)
>SRA1026787 SRR035085.291608 454 Sequencing (SRP001806) 169 246 + Pro GGG [SRA]
Identical group No.272264 (6 seq.)
>WENV170611890 FUWD012430339 [FUWD] metagenome; unknown 175 251 + Pro GGG [ENA]
>WENV170779012 LZCG01000023 [LZCG] oil field metagenome; sample BH-FW-1 from oil reservoir 1144 1068 - Pro GGG [ENA]
>SRA1025549 SRR035085.37453 454 Sequencing (SRP001806) 31 107 + Pro GGG [SRA]
>SRA1026020 SRR035085.127623 454 Sequencing (SRP001806) 31 107 + Pro GGG [SRA]
>SRA1026423 SRR035085.204942 454 Sequencing (SRP001806) 293 217 - Pro GGG [SRA]
>SRA1026487 SRR035085.214355 454 Sequencing (SRP001806) 185 261 + Pro GGG [SRA]
Identical group No.272305 (17 seq.)
>C019456 CP000252 Deltaproteobacteria Syntrophus aciditrophicus SB 1578229 1578305 + Pro GGG [Ensembl]
>WENV170615643 FUWD012863459 [FUWD] metagenome; unknown 6299 6223 - Pro GGG [ENA]
>WENV170624849 FUWD013187968 [FUWD] metagenome; unknown 1529 1605 + Pro GGG [ENA]
>WENV170633117 FUWD013391785 [FUWD] metagenome; unknown 1529 1605 + Pro GGG [ENA]
>SRA1025782 SRR035085.81852 454 Sequencing (SRP001806) 364 440 + Pro GGG [SRA]
>SRA1026134 SRR035085.149700 454 Sequencing (SRP001806) 192 116 - Pro GGG [SRA]
>SRA1029702 SRR035087.167331 454 Sequencing (SRP001808) 303 227 - Pro GGG [SRA]
>SRA1029961 SRR035087.208942 454 Sequencing (SRP001808) 192 116 - Pro GGG [SRA]
>SRA1030608 SRR035087.303954 454 Sequencing (SRP001808) 98 174 + Pro GGG [SRA]
>SRA1030787 SRR035087.331909 454 Sequencing (SRP001808) 100 24 - Pro GGG [SRA]
>SRA1032674 SRR035088.76614 454 Sequencing (SRP001809) 35 111 + Pro GGG [SRA]
>SRA1033733 SRR035088.339386 454 Sequencing (SRP001809) 29 105 + Pro GGG [SRA]
>SRA1036429 SRR035089.520768 454 Sequencing (SRP001810) 244 320 + Pro GGG [SRA]
>SRA1036505 SRR035089.535006 454 Sequencing (SRP001810) 63 139 + Pro GGG [SRA]
>SRA1048129 SRR035094.113696 454 Sequencing (SRP001815) 180 104 - Pro GGG [SRA]
>SRA1048534 SRR035094.194853 454 Sequencing (SRP001815) 94 18 - Pro GGG [SRA]
>SRA1048931 SRR035094.289219 454 Sequencing (SRP001815) 258 182 - Pro GGG [SRA]
Identical group No.272317 (20 seq.)
>WENV181412389 OGCK01000066 [OGCK] hot springs metagenome; hot spring sediment 11692 11768 + Pro GGG [ENA]
>WENV183516337 OMKS01161282 [OMKS] sediment metagenome; hot spring sediment 526 450 - Pro GGG [ENA]
>WENV170016652 BARS01000087 [BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula 695 619 - Pro GGG [ENA]
>WENV170017189 BART01000682 [BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula 1790 1866 + Pro GGG [ENA]
>WENV170017261 BART01005406 [BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula 513 589 + Pro GGG [ENA]
>WENV170018358 BARW01005229 [BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula 210 286 + Pro GGG [ENA]
>WENV170018389 BARW01007848 [BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula 758 682 - Pro GGG [ENA]
>WENV170626078 FUWD013213298 [FUWD] metagenome; unknown 264 340 + Pro GGG [ENA]
>WENV170677263 LDZT01004582 [LDZT] terrestrial metagenome; oil reservoir sample SB1 13842 13918 + Pro GGG [ENA]
>WENV170692848 LGOV01037139 [LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge 1864 1788 - Pro GGG [ENA]
>WENV170695463 LGVE01098472 [LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 8 84 + Pro GGG [ENA]
>WENV170697619 LGVF01164014 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 920 844 - Pro GGG [ENA]
>W1910870314 NCRO01000101 CandidatusAtribacteria Candidatus Atribacteria bacterium RS-JS1 (NCRO) 451 527 + Pro GGG [ENA]
>SRA1025857 SRR035085.95571 454 Sequencing (SRP001806) 220 144 - Pro GGG [SRA]
>SRA1026002 SRR035085.124648 454 Sequencing (SRP001806) 352 276 - Pro GGG [SRA]
>SRA1026514 SRR035085.219466 454 Sequencing (SRP001806) 222 146 - Pro GGG [SRA]
>SRA1030151 SRR035087.234528 454 Sequencing (SRP001808) 207 131 - Pro GGG [SRA]
>SRA1032176 SRR035087.568631 454 Sequencing (SRP001808) 124 200 + Pro GGG [SRA]
>W1610613591 LGGA01000015 CandidatusAtribacteria Atribacteria bacterium 34_128 (LGGA) 13842 13918 + Pro GGG [ENA]
>W1710734763 LGGA01000015 CandidatusAtribacteria Atribacteria bacterium 34_128 (LGGA) 13842 13918 + Pro GGG [ENA]
Identical group No.272330 (3 seq.)
>WENV170611944 FUWD012463762 [FUWD] metagenome; unknown 56 132 + Pro GGG [ENA]
>SRA1025917 SRR035085.110146 454 Sequencing (SRP001806) 136 60 - Pro GGG [SRA]
>SRA1032701 SRR035088.82061 454 Sequencing (SRP001809) 150 74 - Pro GGG [SRA]
Identical group No.272355 (2 seq.)
>WENV170004249 AGTN01616891 [AGTN] bioreactor metagenome; poplar biomass 6122 6046 - Pro GGG [ENA]
>SRA1026099 SRR035085.142191 454 Sequencing (SRP001806) 157 81 - Pro GGG [SRA]
Identical group No.272392 (1 seq.)
>SRA1026343 SRR035085.189931 454 Sequencing (SRP001806) 105 29 - Pro GGG [SRA]
Identical group No.272418 (2 seq.)
>WENV170611887 FUWD012430291 [FUWD] metagenome; unknown 94 20 - Pro GGG [ENA]
>SRA1026490 SRR035085.215880 454 Sequencing (SRP001806) 104 30 - Pro GGG [SRA]
Identical group No.272439 (8 seq.)
>WENV170605057 FUWD010445015 [FUWD] metagenome; unknown 8 84 + Pro GGG [ENA]
>SRA1026591 SRR035085.234360 454 Sequencing (SRP001806) 79 155 + Pro GGG [SRA]
>SRA1037903 SRR035090.216454 454 Sequencing (SRP001811) 283 207 - Pro GGG [SRA]
>SRA1038020 SRR035090.234910 454 Sequencing (SRP001811) 284 208 - Pro GGG [SRA]
>SRA1038657 SRR035090.344629 454 Sequencing (SRP001811) 288 212 - Pro GGG [SRA]
>SRA1038947 SRR035090.398165 454 Sequencing (SRP001811) 284 208 - Pro GGG [SRA]
>SRA1039134 SRR035090.429985 454 Sequencing (SRP001811) 287 211 - Pro GGG [SRA]
>SRA1039614 SRR035090.529954 454 Sequencing (SRP001811) 285 209 - Pro GGG [SRA]
Identical group No.272441 (8 seq.)
>WENV170601712 FUWD010189238 [FUWD] metagenome; unknown 198 274 + Pro GGG [ENA]
>WENV170618625 FUWD012978939 [FUWD] metagenome; unknown 267 343 + Pro GGG [ENA]
>WENV170626418 FUWD013221925 [FUWD] metagenome; unknown 12 88 + Pro GGG [ENA]
>WENV170629989 FUWD013289210 [FUWD] metagenome; unknown 7673 7597 - Pro GGG [ENA]
>SRA1017770 SRR035082.193642 454 Sequencing (SRP001803) 267 343 + Pro GGG [SRA]
>SRA1026597 SRR035085.236613 454 Sequencing (SRP001806) 77 153 + Pro GGG [SRA]
>SRA1029692 SRR035087.165728 454 Sequencing (SRP001808) 150 74 - Pro GGG [SRA]
>SRA1030351 SRR035087.265851 454 Sequencing (SRP001808) 334 258 - Pro GGG [SRA]
Identical group No.272445 (2 seq.)
>WENV180094942 MTBK01039652 [MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge 1014 940 - Pro GGG [ENA]
>SRA1026619 SRR035085.243393 454 Sequencing (SRP001806) 358 284 - Pro GGG [SRA]
Identical group No.654243 (1 seq.)
>SRA1025548 SRR035085.37055 454 Sequencing (SRP001806) 17 91 + Pro GGG [SRA]
Identical group No.654671 (1 seq.)
>SRA1025631 SRR035085.53463 454 Sequencing (SRP001806) 240 314 + Pro GGG [SRA]
Identical group No.779786 (5 seq.)
>WENV170626168 FUWD013215700 [FUWD] metagenome; unknown 612 683 + Pro GGG [ENA]
>SRA1019309 SRR035082.433262 454 Sequencing (SRP001803) 147 218 + Pro GGG [SRA]
>SRA1025626 SRR035085.52575 454 Sequencing (SRP001806) 169 98 - Pro GGG [SRA]
>SRA1026798 SRR035085.293013 454 Sequencing (SRP001806) 422 351 - Pro GGG [SRA]
>SRA1044384 SRR035092.271487 454 Sequencing (SRP001813) 440 369 - Pro GGG [SRA]
Identical group No.779805 (14 seq.)
>WENV170625652 FUWD013202372 [FUWD] metagenome; unknown 496 423 - Pro GGG [ENA]
>WENV170633875 FUWD013404483 [FUWD] metagenome; unknown 496 423 - Pro GGG [ENA]
>SRA1017250 SRR035082.105964 454 Sequencing (SRP001803) 235 308 + Pro GGG [SRA]
>SRA1025879 SRR035085.101088 454 Sequencing (SRP001806) 89 162 + Pro GGG [SRA]
>SRA1025962 SRR035085.118036 454 Sequencing (SRP001806) 75 148 + Pro GGG [SRA]
>SRA1028894 SRR035087.32566 454 Sequencing (SRP001808) 423 350 - Pro GGG [SRA]
>SRA1030284 SRR035087.256022 454 Sequencing (SRP001808) 426 353 - Pro GGG [SRA]
>SRA1030747 SRR035087.325305 454 Sequencing (SRP001808) 458 385 - Pro GGG [SRA]
>SRA1034477 SRR035089.105367 454 Sequencing (SRP001810) 66 139 + Pro GGG [SRA]
>SRA1034762 SRR035089.168812 454 Sequencing (SRP001810) 66 139 + Pro GGG [SRA]
>SRA1041463 SRR035091.245324 454 Sequencing (SRP001812) 497 424 - Pro GGG [SRA]
>SRA1041464 SRR035091.245451 454 Sequencing (SRP001812) 90 17 - Pro GGG [SRA]
>SRA1041895 SRR035091.312107 454 Sequencing (SRP001812) 5 78 + Pro GGG [SRA]
>SRA1045064 SRR035092.403718 454 Sequencing (SRP001813) 73 146 + Pro GGG [SRA]
Identical group No.779818 (1 seq.)
>SRA1026122 SRR035085.147970 454 Sequencing (SRP001806) 72 145 + Pro GGG [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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