tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001806)

Anticodon = TAA

HIT: 9 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.45850 (5 seq.)
>WENV170602325 FUWD010226403 [FUWD] metagenome; unknown 285 198 - Leu TAA [ENA] ¢þ
>WENV170621139 FUWD013050044 [FUWD] metagenome; unknown 1051 964 - Leu TAA [ENA] ¢þ
>WENV170629308 FUWD013266734 [FUWD] metagenome; unknown 1051 964 - Leu TAA [ENA] ¢þ
>SRA1017834 SRR035082.204241 454 Sequencing (SRP001803) 285 198 - Leu TAA [SRA]
>SRA1026160 SRR035085.155844 454 Sequencing (SRP001806) 342 429 + Leu TAA [SRA]
Identical group No.72768 (2 seq.)
>WENV170613250 FUWD012792016 [FUWD] metagenome; unknown 443 530 + Leu TAA [ENA] ¢þ
>SRA1026230 SRR035085.167418 454 Sequencing (SRP001806) 113 26 - Leu TAA [SRA]
Identical group No.87030 (4 seq.)
>WENV170624830 FUWD013187433 [FUWD] metagenome; unknown 6783 6696 - Leu TAA [ENA] ¢þ
>WENV170633098 FUWD013391324 [FUWD] metagenome; unknown 6783 6696 - Leu TAA [ENA] ¢þ
>SRA1025989 SRR035085.121815 454 Sequencing (SRP001806) 357 270 - Leu TAA [SRA]
>SRA1026811 SRR035085.297438 454 Sequencing (SRP001806) 88 175 + Leu TAA [SRA]
Identical group No.87032 (7 seq.)
>WENV183800735 PVBE010612964 [PVBE] marine metagenome; water 186 273 + Leu TAA [ENA] ¢þ
>WENV170605020 FUWD010441545 [FUWD] metagenome; unknown 29 116 + Leu TAA [ENA] ¢þ
>WENV170698840 LGVF01427963 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 1656 1743 + Leu TAA [ENA] ¢þ
>SRA1026103 SRR035085.143678 454 Sequencing (SRP001806) 67 154 + Leu TAA [SRA]
>SRA1036559 SRR035089.548123 454 Sequencing (SRP001810) 88 1 - Leu TAA [SRA]
>SRA1049087 SRR035095.17870 454 Sequencing (SRP001816) 168 255 + Leu TAA [SRA]
>SRA1049223 SRR035095.40504 454 Sequencing (SRP001816) 167 254 + Leu TAA [SRA]
Identical group No.87043 (4 seq.)
>WENV170622540 FUWD013108273 [FUWD] metagenome; unknown 1638 1551 - Leu TAA [ENA] ¢þ
>WENV170630435 FUWD013308435 [FUWD] metagenome; unknown 4713 4800 + Leu TAA [ENA] ¢þ
>SRA1026655 SRR035085.251222 454 Sequencing (SRP001806) 430 343 - Leu TAA [SRA]
>SRA1044111 SRR035092.225759 454 Sequencing (SRP001813) 247 334 + Leu TAA [SRA]
Identical group No.112537 (4 seq.)
>WENV170613139 FUWD012782154 [FUWD] metagenome; unknown 597 681 + Leu TAA [ENA] ¢þ
>SRA1026196 SRR035085.161694 454 Sequencing (SRP001806) 246 162 - Leu TAA [SRA]
>SRA1042339 SRR035091.374555 454 Sequencing (SRP001812) 367 451 + Leu TAA [SRA]
>SRA1043763 SRR035092.171700 454 Sequencing (SRP001813) 131 215 + Leu TAA [SRA]
Identical group No.112543 (2 seq.)
>WENV170607856 FUWD010861693 [FUWD] metagenome; unknown 499 415 - Leu TAA [ENA] ¢þ
>SRA1026313 SRR035085.184388 454 Sequencing (SRP001806) 508 424 - Leu TAA [SRA]
Identical group No.112550 (3 seq.)
>WENV170603316 FUWD010300920 [FUWD] metagenome; unknown 441 527 + Leu TAA [ENA] ¢þ
>SRA1026638 SRR035085.246412 454 Sequencing (SRP001806) 347 433 + Leu TAA [SRA]
>SRA1047989 SRR035094.83255 454 Sequencing (SRP001815) 70 153 + Leu TAA [SRA]
Identical group No.153854 (3 seq.)
>WENV170623586 FUWD013159196 [FUWD] metagenome; unknown 1047 962 - Leu TAA [ENA] ¢þ
>WENV170631863 FUWD013368698 [FUWD] metagenome; unknown 1047 962 - Leu TAA [ENA] ¢þ
>SRA1026035 SRR035085.131076 454 Sequencing (SRP001806) 320 235 - Leu TAA [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK