tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001809)

Anticodon = TCA

HIT: 6 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.825 (6 seq.)
>WENV170601722 FUWD010190226 [FUWD] metagenome; unknown 449 546 + SeC TCA [ENA]
>SRA1033299 SRR035088.219529 454 Sequencing (SRP001809) 437 534 + SeC TCA [SRA]
>SRA1053940 SRR035099.9988 454 Sequencing (SRP001820) 198 101 - SeC TCA [SRA]
>SRA1054154 SRR035099.70300 454 Sequencing (SRP001820) 161 64 - SeC TCA [SRA]
>SRA1054234 SRR035099.90024 454 Sequencing (SRP001820) 161 64 - SeC TCA [SRA]
>SRA1054378 SRR035099.118832 454 Sequencing (SRP001820) 379 282 - SeC TCA [SRA]
Identical group No.940 (6 seq.)
>WENV170693652 LGVC01035926 [LGVC] marine sediment metagenome; sample #5133, Elevator 3A push core 47, collected at Hydrate Ridge North during Jason II dive 408 505 + SeC(p) TCA [ENA]
>WENV170695526 LGVE01113699 [LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 1369 1272 - SeC(p) TCA [ENA]
>WENV170697321 LGVF01112680 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 2280 2183 - SeC(p) TCA [ENA]
>SRA1033447 SRR035088.259726 454 Sequencing (SRP001809) 200 297 + SeC TCA [SRA]
>SRA1033682 SRR035088.322288 454 Sequencing (SRP001809) 101 4 - SeC TCA [SRA]
>SRA1049554 SRR035095.95245 454 Sequencing (SRP001816) 420 323 - SeC TCA [SRA]
Identical group No.1459 (1 seq.)
>SRA1032455 SRR035088.14724 454 Sequencing (SRP001809) 321 418 + SeC TCA [SRA]
Identical group No.1460 (1 seq.)
>SRA1032522 SRR035088.37496 454 Sequencing (SRP001809) 94 -1 - SeC TCA [SRA]
Identical group No.1461 (1 seq.)
>SRA1033871 SRR035088.386039 454 Sequencing (SRP001809) 290 195 - SeC TCA [SRA]
Identical group No.1462 (1 seq.)
>SRA1034067 SRR035088.473148 454 Sequencing (SRP001809) 133 228 + SeC TCA [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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