tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001815)

Anticodon = TCC

HIT: 19 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.264012 (1 seq.)
>SRA1048564 SRR035094.199164 454 Sequencing (SRP001815) 336 414 + Gly TCC [SRA]
Identical group No.272250 (17 seq.)
>W131157537 AQSK01000158 Unclassified Cloacimonetes bacterium SCGC AAA252-E13 KSB1 bacterium SCGC AAA252-E13 [AQSK] 349 425 + Gly TCC [ENA] ¡û
>W131157542 AQSK01000158 Unclassified Cloacimonetes bacterium SCGC AAA252-E13 KSB1 bacterium SCGC AAA252-E13 [AQSK] 25839 25763 - Gly TCC [ENA] ¡û
>W131192921 ASNG01000014 Unclassified Cloacimonetes bacterium SCGC AAA252-O02 KSB1 bacterium SCGC AAA252-O02 [ASNG] 34344 34268 - Gly TCC [ENA] ¡û
>W131192945 ASNH01000031 Unclassified Cloacimonetes bacterium SCGC AAA255-C20 KSB1 bacterium SCGC AAA255-C20 [ASNH] 20599 20523 - Gly TCC [ENA] ¡û
>W131192974 ASNI01000012 Unclassified Cloacimonetes bacterium SCGC AAA252-N17 KSB1 bacterium SCGC AAA252-N17 [ASNI] 320 396 + Gly TCC [ENA] ¡û
>W131193009 ASNJ01000032 Unclassified Cloacimonetes bacterium SCGC AAA252-N11 KSB1 bacterium SCGC AAA252-N11 [ASNJ] 16045 15969 - Gly TCC [ENA] ¡û
>W131193024 ASNK01000023 Unclassified Cloacimonetes bacterium SCGC AAA252-E20 KSB1 bacterium SCGC AAA252-E20 [ASNK] 553 629 + Gly TCC [ENA] ¡û
>W131193183 ASNT01000007 Unclassified Cloacimonetes bacterium SCGC AAA252-P10 KSB1 bacterium SCGC AAA252-P10 [ASNT] 432 508 + Gly TCC [ENA] ¡û
>W141139686 AWNX01000034 Unclassified Cloacimonetes bacterium JGI OTU-1 [AWNX] 431 507 + Gly TCC [ENA] ¡û
>WENV170624729 FUWD013185793 [FUWD] metagenome; unknown 961 885 - Gly TCC [ENA] ¢þ
>WENV170633009 FUWD013389969 [FUWD] metagenome; unknown 961 885 - Gly TCC [ENA] ¢þ
>SRA1025510 SRR035085.28007 454 Sequencing (SRP001806) 344 268 - Gly TCC [SRA]
>SRA1033959 SRR035088.424048 454 Sequencing (SRP001809) 107 31 - Gly TCC [SRA]
>SRA1035106 SRR035089.238408 454 Sequencing (SRP001810) 300 376 + Gly TCC [SRA]
>SRA1036056 SRR035089.435213 454 Sequencing (SRP001810) 160 84 - Gly TCC [SRA]
>SRA1047717 SRR035094.27413 454 Sequencing (SRP001815) 154 78 - Gly TCC [SRA]
>SRA1047761 SRR035094.36244 454 Sequencing (SRP001815) 154 78 - Gly TCC [SRA]
Identical group No.272257 (7 seq.)
>WENV170600115 FUWD010108391 [FUWD] metagenome; unknown 748 672 - Gly TCC [ENA] ¢þ
>WENV170600155 FUWD010111227 [FUWD] metagenome; unknown 367 291 - Gly TCC [ENA] ¢þ
>WENV170618339 FUWD012963419 [FUWD] metagenome; unknown 668 592 - Gly TCC [ENA] ¢þ
>SRA1019299 SRR035082.431787 454 Sequencing (SRP001803) 272 348 + Gly TCC [SRA]
>SRA1025529 SRR035085.34324 454 Sequencing (SRP001806) 247 323 + Gly TCC [SRA]
>SRA1044839 SRR035092.354917 454 Sequencing (SRP001813) 56 132 + Gly TCC [SRA]
>SRA1048342 SRR035094.151521 454 Sequencing (SRP001815) 377 301 - Gly TCC [SRA]
Identical group No.272491 (11 seq.)
>WENV170603335 FUWD010302736 [FUWD] metagenome; unknown 373 449 + Gly TCC [ENA] ¢þ
>WENV170619085 FUWD012999027 [FUWD] metagenome; unknown 498 574 + Gly TCC [ENA] ¢þ
>WENV170619087 FUWD012999028 [FUWD] metagenome; unknown 56 132 + Gly TCC [ENA] ¢þ
>WENV170699126 LGVF01485599 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 623 699 + Gly TCC [ENA] ¢þ
>SRA1026832 SRR035085.305881 454 Sequencing (SRP001806) 143 217 + Gly TCC [SRA]
>SRA1029552 SRR035087.144754 454 Sequencing (SRP001808) 383 459 + Gly TCC [SRA]
>SRA1029968 SRR035087.209243 454 Sequencing (SRP001808) 35 111 + Gly TCC [SRA]
>SRA1035014 SRR035089.218276 454 Sequencing (SRP001810) 337 413 + Gly TCC [SRA]
>SRA1036296 SRR035089.489780 454 Sequencing (SRP001810) 56 132 + Gly TCC [SRA]
>SRA1047851 SRR035094.54860 454 Sequencing (SRP001815) 118 192 + Gly TCC [SRA]
>SRA1048034 SRR035094.96599 454 Sequencing (SRP001815) 118 192 + Gly TCC [SRA]
Identical group No.272707 (6 seq.)
>WENV183802841 PVBE010791798 [PVBE] marine metagenome; water 156 80 - Gly TCC [ENA] ¢þ
>WENV170457706 CEVA01502788 [CEVA] marine metagenome genome assembly TARA_125_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1374 1450 + Gly TCC [ENA] ¢þ
>WENV170520290 CEWE01444933 [CEWE] marine metagenome genome assembly TARA_124_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 387 311 - Gly TCC [ENA] ¢þ
>C181118903 CP025544 Unclassified Candidatus Chromulinivorax destructor SeV1 [CP025544] 394858 394782 - Gly TCC - ¡û
>SRA1035239 SRR035089.267225 454 Sequencing (SRP001810) 369 293 - Gly TCC [SRA]
>SRA1048719 SRR035094.234325 454 Sequencing (SRP001815) 336 412 + Gly TCC [SRA]
Identical group No.415531 (1 seq.)
>SRA1047916 SRR035094.67466 454 Sequencing (SRP001815) 81 157 + Gly TCC [SRA]
Identical group No.453224 (5 seq.)
>WENV170611627 FUWD012361975 [FUWD] metagenome; unknown 192 119 - Gly TCC [ENA] ¢þ
>SRA1018701 SRR035082.334753 454 Sequencing (SRP001803) 192 119 - Gly TCC [SRA]
>SRA1025542 SRR035085.36027 454 Sequencing (SRP001806) 296 369 + Gly TCC [SRA]
>SRA1026128 SRR035085.148570 454 Sequencing (SRP001806) 296 369 + Gly TCC [SRA]
>SRA1048774 SRR035094.245628 454 Sequencing (SRP001815) 111 184 + Gly TCC [SRA]
Identical group No.453555 (4 seq.)
>WENV170619952 FUWD013023525 [FUWD] metagenome; unknown 79 154 + Gly TCC [ENA] ¢þ
>WENV170628079 FUWD013241589 [FUWD] metagenome; unknown 79 154 + Gly TCC [ENA] ¢þ
>SRA1034623 SRR035089.138934 454 Sequencing (SRP001810) 40 115 + Gly TCC [SRA]
>SRA1048036 SRR035094.96608 454 Sequencing (SRP001815) 89 164 + Gly TCC [SRA]
Identical group No.484182 (7 seq.)
>WENV170600334 FUWD010120684 [FUWD] metagenome; unknown 273 346 + Gly TCC [ENA] ¢þ
>WENV170626946 FUWD013230497 [FUWD] metagenome; unknown 8967 9040 + Gly TCC [ENA] ¢þ
>SRA1017526 SRR035082.155576 454 Sequencing (SRP001803) 7 80 + Gly TCC [SRA]
>SRA1018260 SRR035082.264876 454 Sequencing (SRP001803) 128 201 + Gly TCC [SRA]
>SRA1029667 SRR035087.160696 454 Sequencing (SRP001808) 274 347 + Gly TCC [SRA]
>SRA1042812 SRR035091.450219 454 Sequencing (SRP001812) 544 468 - Gly TCC [SRA]
>SRA1048546 SRR035094.197100 454 Sequencing (SRP001815) 116 189 + Gly TCC [SRA]
Identical group No.486499 (4 seq.)
>W1711392673 MENU01000209 Bacteroidota Bacteroidetes bacterium GWE2_29_8 [MENU] 3940 3867 - Gly TCC [ENA] ¡û
>W1711392985 MEOD01000008 Bacteroidota Bacteroidetes bacterium GWF2_29_10 [MEOD] 5101 5028 - Gly TCC [ENA] ¡û
>WENV170612088 FUWD012500929 [FUWD] metagenome; unknown 182 255 + Gly TCC [ENA] ¢þ
>SRA1048091 SRR035094.107120 454 Sequencing (SRP001815) 164 237 + Gly TCC [SRA]
Identical group No.612523 (1 seq.)
>SRA1047841 SRR035094.51832 454 Sequencing (SRP001815) 351 278 - Gly TCC [SRA]
Identical group No.612526 (1 seq.)
>SRA1047890 SRR035094.62868 454 Sequencing (SRP001815) 69 142 + Gly TCC [SRA]
Identical group No.654428 (13 seq.)
>WENV170220459 CEPZ01169295 [CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 222 149 - Gly TCC [ENA] ¢þ
>WENV170617861 FUWD012940152 [FUWD] metagenome; unknown 607 536 - Gly TCC [ENA] ¢þ
>WENV170617864 FUWD012940153 [FUWD] metagenome; unknown 358 287 - Gly TCC [ENA] ¢þ
>SRA1030581 SRR035087.299819 454 Sequencing (SRP001808) 259 188 - Gly TCC [SRA]
>SRA1034273 SRR035089.44086 454 Sequencing (SRP001810) 18 89 + Gly TCC [SRA]
>SRA1041707 SRR035091.280525 454 Sequencing (SRP001812) 262 333 + Gly TCC [SRA]
>SRA1041846 SRR035091.304041 454 Sequencing (SRP001812) 142 213 + Gly TCC [SRA]
>SRA1043139 SRR035092.56687 454 Sequencing (SRP001813) 186 257 + Gly TCC [SRA]
>SRA1047942 SRR035094.72171 454 Sequencing (SRP001815) 74 145 + Gly TCC [SRA]
>SRA1049048 SRR035095.6838 454 Sequencing (SRP001816) 201 130 - Gly TCC [SRA]
>SRA1049072 SRR035095.14260 454 Sequencing (SRP001816) 202 131 - Gly TCC [SRA]
>SRA1049496 SRR035095.86638 454 Sequencing (SRP001816) 89 160 + Gly TCC [SRA]
>SRA1050082 SRR035095.188450 454 Sequencing (SRP001816) 354 283 - Gly TCC [SRA]
Identical group No.710825 (6 seq.)
>WENV170608181 FUWD010899472 [FUWD] metagenome; unknown 175 101 - Gly TCC [ENA] ¢þ
>SRA1017008 SRR035082.68333 454 Sequencing (SRP001803) 213 139 - Gly TCC [SRA]
>SRA1019712 SRR035082.509617 454 Sequencing (SRP001803) 273 199 - Gly TCC [SRA]
>SRA1044155 SRR035092.232481 454 Sequencing (SRP001813) 132 206 + Gly TCC [SRA]
>SRA1044413 SRR035092.275480 454 Sequencing (SRP001813) 175 101 - Gly TCC [SRA]
>SRA1047730 SRR035094.31198 454 Sequencing (SRP001815) 328 402 + Gly TCC [SRA]
Identical group No.711449 (6 seq.)
>WENV170623396 FUWD013149661 [FUWD] metagenome; unknown 257 185 - Gly TCC [ENA] ¢þ
>WENV170631666 FUWD013360771 [FUWD] metagenome; unknown 257 185 - Gly TCC [ENA] ¢þ
>SRA1017985 SRR035082.224779 454 Sequencing (SRP001803) 257 185 - Gly TCC [SRA]
>SRA1043176 SRR035092.64457 454 Sequencing (SRP001813) 227 299 + Gly TCC [SRA]
>SRA1043969 SRR035092.203380 454 Sequencing (SRP001813) 179 107 - Gly TCC [SRA]
>SRA1048759 SRR035094.242285 454 Sequencing (SRP001815) 185 257 + Gly TCC [SRA]
Identical group No.779895 (5 seq.)
>WENV170608210 FUWD010902581 [FUWD] metagenome; unknown 97 24 - Gly TCC [ENA] ¢þ
>SRA1016831 SRR035082.38440 454 Sequencing (SRP001803) 344 271 - Gly TCC [SRA]
>SRA1035118 SRR035089.241188 454 Sequencing (SRP001810) 335 262 - Gly TCC [SRA]
>SRA1035604 SRR035089.338787 454 Sequencing (SRP001810) 336 263 - Gly TCC [SRA]
>SRA1048123 SRR035094.112985 454 Sequencing (SRP001815) 107 34 - Gly TCC [SRA]
Identical group No.779960 (7 seq.)
>WENV170620848 FUWD013041188 [FUWD] metagenome; unknown 1603 1530 - Gly TCC [ENA] ¢þ
>WENV170629001 FUWD013258259 [FUWD] metagenome; unknown 1603 1530 - Gly TCC [ENA] ¢þ
>SRA1032902 SRR035088.126286 454 Sequencing (SRP001809) 81 154 + Gly TCC [SRA]
>SRA1033986 SRR035088.433425 454 Sequencing (SRP001809) 138 65 - Gly TCC [SRA]
>SRA1036262 SRR035089.482447 454 Sequencing (SRP001810) 102 29 - Gly TCC [SRA]
>SRA1040727 SRR035091.138181 454 Sequencing (SRP001812) 237 164 - Gly TCC [SRA]
>SRA1047974 SRR035094.79595 454 Sequencing (SRP001815) 344 417 + Gly TCC [SRA]
Identical group No.805102 (5 seq.)
>WENV170607949 FUWD010873830 [FUWD] metagenome; unknown 1 71 + Gly TCC [ENA] ¢þ
>WENV170613316 FUWD012795014 [FUWD] metagenome; unknown 155 85 - Gly TCC [ENA] ¢þ
>SRA1042469 SRR035091.392104 454 Sequencing (SRP001812) 211 281 + Gly TCC [SRA]
>SRA1047879 SRR035094.60148 454 Sequencing (SRP001815) 241 311 + Gly TCC [SRA]
>SRA1047931 SRR035094.69912 454 Sequencing (SRP001815) 241 311 + Gly TCC [SRA]
Identical group No.805294 (3 seq.)
>WENV170612760 FUWD012682631 [FUWD] metagenome; unknown 197 124 - Gly TCC [ENA] ¢þ
>SRA1048144 SRR035094.116009 454 Sequencing (SRP001815) 207 134 - Gly TCC [SRA]
>SRA1048820 SRR035094.256393 454 Sequencing (SRP001815) 207 134 - Gly TCC [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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