tRNA genes clustered and arranged according to each identical group

Alphaproteobacteria

Anticodon = CGA

HIT: 5 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.10062 (1 seq.)
>PL171001241 CP016463 Alphaproteobacteria Bosea sp. RAC05 plasmid:pBSY19_1 470544 470637 + Ser CGA [ENA]
Identical group No.24863 (1 seq.)
>PL173000153 CP016463 Alphaproteobacteria Bosea sp. RAC05 plasmid:pBSY19_1 470374 470465 + Ser CGA [ENA]
Identical group No.46148 (42 seq.)
>W1711294782 MABH01000164 Alphaproteobacteria Rhodobacter johrii (MABH) 37370 37281 - Ser CGA [ENA]
>PL171000285 CP000662 Alphaproteobacteria Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01 697867 697778 - Ser CGA [Ensembl]
>C171037031 CP015211 Alphaproteobacteria Rhodobacter sphaeroides MBTLJ-13 15083 14994 - Ser CGA -
>C171067795 CP017781 Alphaproteobacteria Rhodobacter sp. LPB0142 (CP017781) 1817186 1817097 - Ser CGA -
>W131058664 ANFS01000059 Alphaproteobacteria Rhodobacter sp. AKP1 [ANFS] 18362 18451 + Ser CGA [ENA]
>C019256 CP000144 Alphaproteobacteria Rhodobacter sphaeroides 2.4.1 15083 14994 - Ser CGA [Ensembl]
>C019349 CP000578 Alphaproteobacteria Rhodobacter sphaeroides ATCC 17029 592951 592862 - Ser CGA [Ensembl]
>WENV180232436 OBCO01000432 [OBCO] synthetic metagenome; purchased from BEI Resources HM-276D 18419 18508 + Ser CGA [ENA]
>WENV180233384 OBCP01000433 [OBCP] synthetic metagenome; purchased from BEI Resources HM-276D 18419 18508 + Ser CGA [ENA]
>w001247 AAAE01000111 Alphaproteobacteria Rhodobacter sphaeroides [AAAE] 10175 10084 - Ser CGA [ENA]
>WENV180569873 OCLR01000637 [OCLR] synthetic metagenome; purchased from BEI Resources HM-276D 18419 18508 + Ser CGA [ENA]
>WENV180570769 OCLS01000535 [OCLS] synthetic metagenome; purchased from BEI Resources HM-276D 18419 18508 + Ser CGA [ENA]
>WENV180571759 OCLT01000421 [OCLT] synthetic metagenome; purchased from BEI Resources HM-276D 18419 18508 + Ser CGA [ENA]
>WENV180574011 OCLW01000434 [OCLW] synthetic metagenome; purchased from BEI Resources HM-276D 18923 19012 + Ser CGA [ENA]
>WENV180640068 OCRL01000419 [OCRL] synthetic metagenome; purchased from BEI Resources HM-276D 18419 18508 + Ser CGA [ENA]
>WENV180641029 OCRM01000445 [OCRM] synthetic metagenome; purchased from BEI Resources HM-276D 18419 18508 + Ser CGA [ENA]
>C181017263 CP015288 Alphaproteobacteria Rhodobacter sphaeroides MBTLJ-20 (CP015287, CP015288) 15083 14994 - Ser CGA -
>C181084435 CP023548 Alphaproteobacteria Rhodobacter sp. CZR27 (CP023548) 252588 252499 - Ser CGA -
>C181191148 CP030272 Alphaproteobacteria Rhodobacter sphaeroides 2.4.1 (CP030271, CP030272) 15083 14994 - Ser CGA -
>C191079683 CP031751 Alphaproteobacteria Rhodobacter sphaeroides EBL0706 (CP031750, CP031751) 656156 656067 - Ser CGA -
>W09104747 AAME01000053 Alphaproteobacteria Rhodobacter sphaeroides ATCC 17025 [AAME] 2697 2786 + Ser CGA [ENA]
>W09104798 AAMF01000015 Alphaproteobacteria Rhodobacter sphaeroides ATCC 17029 [AAMF] 19278 19367 + Ser CGA [ENA]
>C191151038 CP036420 Alphaproteobacteria Rhodobacter sphaeroides HJ (CP036419, CP036420) 1167385 1167296 - Ser CGA -
>W1910548886 FZOV01000015 Alphaproteobacteria Rhodobacter megalophilus DSM 18937 (FZOV) 18409 18498 + Ser CGA [ENA]
>W1910574845 JQHS01000004 Alphaproteobacteria Falsirhodobacter deserti W402 (JQHS) 309224 309313 + Ser CGA [ENA]
>C09109094 CP001151 Alphaproteobacteria Rhodobacter sphaeroides KD131 39937 39848 - Ser CGA [Ensembl]
>W1911491946 OAOQ01000031 Alphaproteobacteria Rhodobacter ovatus JA234 (OAOQ) 724 635 - Ser CGA [ENA]
>W1911495369 OBMT01000009 Alphaproteobacteria Rhodobacter maris JA276 (OBMT) 153638 153727 + Ser CGA [ENA]
>W1911749468 QWGP01000042 Alphaproteobacteria Rhodobacter sphaeroides FY (QWGP) 9112 9023 - Ser CGA [ENA]
>W1911766300 QXDK01000036 Alphaproteobacteria Rhodobacter sphaeroides SCJ (QXDK) 1340 1251 - Ser CGA [ENA]
>W1810116291 PHOB01000144 Alphaproteobacteria Rhodobacter sphaeroides YL101 (PHOB) 726 637 - Ser CGA [ENA]
>W1810119967 PHSI01000102 Alphaproteobacteria Rhodobacter azotoformans YLK20 (PHSI) 17945 18034 + Ser CGA [ENA]
>W1810463843 PZZW01000006 Alphaproteobacteria Rhodobacter johrii JA192 (PZZW) 19159 19248 + Ser CGA [ENA]
>W1810477389 QAOT01000032 Alphaproteobacteria Rhodobacter azotoformans KA25 (QAOT) 8502 8413 - Ser CGA [ENA]
>W1810699124 QMCC01000013 Alphaproteobacteria Rhodobacter johrii CDR-SL 7Cii (QMCC) 19126 19215 + Ser CGA [ENA]
>W1810785209 QRBG01000040 Alphaproteobacteria Rhodobacter sphaeroides f. sp. denitrificans IL106 (QRBG) 152785 152696 - Ser CGA [ENA]
>W11160210 AFER01000002 Alphaproteobacteria Rhodobacter sphaeroides WS8N [AFER] 210159 210070 - Ser CGA [ENA]
>C161048391 CP012961 Alphaproteobacteria Rhodobacter sphaeroides MBTLJ-8 15083 14994 - Ser CGA -
>W121076818 AKBU01000002 Alphaproteobacteria Rhodobacter sphaeroides 2.4.1 [AKBU] 151390 151301 - Ser CGA [ENA]
>W121102162 AKVW01000002 Alphaproteobacteria Rhodobacter sphaeroides 2.4.1 [AKVW] 15083 14994 - Ser CGA [ENA]
>W1610081494 BDDO01000010 Alphaproteobacteria Paenirhodobacter sp. MME-103 (BDDO) 54417 54328 - Ser CGA [ENA]
>W1710080145 BDDO01000010 Alphaproteobacteria Paenirhodobacter sp. MME-103 (BDDO) 54417 54328 - Ser CGA [ENA]
Identical group No.49095 (18 seq.)
>W1710785270 LJHS01000012 Alphaproteobacteria Rhizobium sp. AAP43 (LJHS) 296202 296113 - Ser CGA [ENA]
>W1710785675 LJIB01000025 Alphaproteobacteria Rhizobium sp. AAP116 (LJIB) 24858 24947 + Ser CGA [ENA]
>W1710861528 LMDR01000008 Alphaproteobacteria Rhizobium sp. Root1240 (LMDR) 101736 101825 + Ser CGA [ENA]
>W1710868579 LMJE01000008 Alphaproteobacteria Rhizobium sp. Root274 (LMJE) 101711 101800 + Ser CGA [ENA]
>W131036187 ALJF01000009 Alphaproteobacteria Agrobacterium albertimagni AOL15 [ALJF] 46382 46293 - Ser CGA [ENA]
>W1711384742 MEDI01000795 Alphaproteobacteria Kaistia sp. SCN 65-12 (MEDI) 18 107 + Ser CGA [ENA]
>PL171001256 CP016500 Alphaproteobacteria Agrobacterium sp. RAC06 plasmid:pBSY240_1 107625 107714 + Ser CGA [ENA]
>WENV180022143 FTFQ01000265 [FTFQ] metagenome; soil 1120 1031 - Ser CGA [ENA]
>WENV180031375 FTJO01038200 [FTJO] metagenome; soil 871 960 + Ser CGA [ENA]
>WENV181414332 OGCL01000223 [OGCL] hot springs metagenome; Hot spring water 62348 62437 + Ser CGA [ENA]
>WENV170680695 LFEF01011152 [LFEF] freshwater metagenome; waterbloom 6354 6265 - Ser CGA [ENA]
>WENV171003569 NNBU01000546 [NNBU] plant metagenome; symbiotic tissue sample KVJ2 68856 68945 + Ser CGA [ENA]
>W1810195492 PKRP01000001 Alphaproteobacteria Rhizobium sp. TH135 (PKRP) 7065 6976 - Ser CGA [ENA]
>W1810670706 QJRY01000003 Alphaproteobacteria Rhizobium sp. W44 (QJRY) 404242 404153 - Ser CGA [ENA]
>W1610649076 LJHS01000012 Alphaproteobacteria Rhizobium sp. AAP43 (LJHS) 296202 296113 - Ser CGA [ENA]
>W1610649481 LJIB01000025 Alphaproteobacteria Rhizobium sp. AAP116 (LJIB) 24858 24947 + Ser CGA [ENA]
>W1610723874 LMDR01000008 Alphaproteobacteria Rhizobium sp. Root1240 (LMDR) 101736 101825 + Ser CGA [ENA]
>W1610730925 LMJE01000008 Alphaproteobacteria Rhizobium sp. Root274 (LMJE) 101711 101800 + Ser CGA [ENA]
Identical group No.71927 (1 seq.)
>PL173000054 CP001511 Alphaproteobacteria Methylobacterium extorquens AM1 plasmid:megaplasmid 1013193 1013282 + Ser CGA [ENA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK