tRNA genes clustered and arranged according to each identical group

Alveolata

Anticodon = TAC

HIT: 6 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.480777 (2 seq.)
>CHL1810003192 HM222968 Alveolata Chromerida sp. RM11 (HM222968) 84725 84799 + Val TAC [ENA] ¡û
>CHL1810003202 HM222968 Alveolata Chromerida sp. RM11 (HM222968) 59032 58958 - Val TAC [ENA] ¡û
Identical group No.639039 (1 seq.)
>CHL1810046773 LC008447 Alveolata Lepidodinium chlorophorum (LC008447) 35877 35951 + Val TAC [ENA] ¡û
Identical group No.662102 (76 seq.)
>WENV180036767 FVAA010317339 [FVAA] soil metagenome; Soil 75 2 - Val TAC [ENA] ¢þ
>WENV180038605 LLBY010000546 [LLBY] soil metagenome; soil from tomato rhizosphere 32329 32256 - Val TAC [ENA] ¢þ
>WENV180040783 LLBZ010014679 [LLBZ] soil metagenome; soil from tomato rhizosphere 14856 14929 + Val TAC [ENA] ¢þ
>WENV180357442 OBNN01010534 [OBNN] marine metagenome; Coastal water 471 544 + Val TAC [ENA] ¢þ
>WENV180359125 OBNR01008494 [OBNR] marine metagenome; Seawater_00002010_00002149 309 236 - Val TAC [ENA] ¢þ
>WENV180367841 OBOF01006078 [OBOF] marine metagenome; ENVO:00002010 280 353 + Val TAC [ENA] ¢þ
>WENV180368750 OBOG01000010 [OBOG] marine metagenome; seawater 3408 3335 - Val TAC [ENA] ¢þ
>WENV180375290 OBOL01001474 [OBOL] marine metagenome; Surface water 1491 1564 + Val TAC [ENA] ¢þ
>WENV180394635 OBPS01030132 [OBPS] marine metagenome; ENVO:00002010 seawater 287 214 - Val TAC [ENA] ¢þ
>WENV180591354 OCOV01013914 [OCOV] marine metagenome; ENVO:01000301 592 519 - Val TAC [ENA] ¢þ
>WENV180594042 OCOY01018796 [OCOY] marine metagenome; ENVO:00002010 502 575 + Val TAC [ENA] ¢þ
>WENV180650558 OCSY01072847 [OCSY] marine metagenome; 30 L Plastic container 32 105 + Val TAC [ENA] ¢þ
>WENV181162820 OEIO01018292 [OEIO] marine metagenome; sea ice 577 504 - Val TAC [ENA] ¢þ
>WENV181306871 OFIN01011365 [OFIN] marine metagenome; sea ice 532 459 - Val TAC [ENA] ¢þ
>WENV181315118 OFJM01012938 [OFJM] marine metagenome; sea ice 351 422 + Val TAC [ENA] ¢þ
>WENV181322389 OFKR01000976 [OFKR] marine metagenome; sea ice 1211 1140 - Val TAC [ENA] ¢þ
>WENV181322870 OFKV01004663 [OFKV] marine metagenome; sea ice 569 641 + Val TAC [ENA] ¢þ
>WENV181322927 OFKV01020072 [OFKV] marine metagenome; sea ice 547 474 - Val TAC [ENA] ¢þ
>WENV181323905 OFKZ01028858 [OFKZ] marine metagenome; sea ice 431 359 - Val TAC [ENA] ¢þ
>WENV181324054 OFLB01000425 [OFLB] marine metagenome; seawater 890 817 - Val TAC [ENA] ¢þ
>WENV181324243 OFLD01002047 [OFLD] marine metagenome; sea ice 1021 948 - Val TAC [ENA] ¢þ
>WENV181329600 OFLX01026663 [OFLX] seawater metagenome; seawater 181 109 - Val TAC [ENA] ¢þ
>WENV183060139 OLHW01019825 [OLHW] seawater metagenome; Sea water 283 210 - Val TAC [ENA] ¢þ
>WENV183614855 OOEA01004162 [OOEA] marine metagenome; sea ice 935 863 - Val TAC [ENA] ¢þ
>WENV183615924 OOEC01005551 [OOEC] marine metagenome; sea ice 1168 1095 - Val TAC [ENA] ¢þ
>WENV183615941 OOEC01008040 [OOEC] marine metagenome; sea ice 841 914 + Val TAC [ENA] ¢þ
>WENV183616488 OOED01045426 [OOED] marine metagenome; seawater 181 109 - Val TAC [ENA] ¢þ
>WENV183616738 OOEE01000119 [OOEE] marine metagenome; sea ice 2004 2077 + Val TAC [ENA] ¢þ
>WENV183617602 OOEG01014289 [OOEG] marine metagenome; sea ice 436 509 + Val TAC [ENA] ¢þ
>WENV183620401 OOFR01050454 [OOFR] marine metagenome; seawater 476 549 + Val TAC [ENA] ¢þ
>WENV183620868 OOFS01068485 [OOFS] marine metagenome; sea ice 58 131 + Val TAC [ENA] ¢þ
>WENV183621409 OOFU01000330 [OOFU] marine metagenome; sea ice 647 574 - Val TAC [ENA] ¢þ
>WENV183622649 OOFW01000770 [OOFW] marine metagenome; sea ice 2269 2341 + Val TAC [ENA] ¢þ
>WENV183622749 OOFW01005380 [OOFW] marine metagenome; sea ice 294 366 + Val TAC [ENA] ¢þ
>WENV183622975 OOFX01000203 [OOFX] marine metagenome; sea ice 4102 4175 + Val TAC [ENA] ¢þ
>WENV183623259 OOFX01045240 [OOFX] marine metagenome; sea ice 315 243 - Val TAC [ENA] ¢þ
>WENV183623374 OOFY01001454 [OOFY] marine metagenome; sea ice 582 510 - Val TAC [ENA] ¢þ
>WENV183623633 OOGA01023372 [OOGA] marine metagenome; sea ice 409 337 - Val TAC [ENA] ¢þ
>WENV183624325 OOGD01001103 [OOGD] marine metagenome; sea ice 797 724 - Val TAC [ENA] ¢þ
>WENV183624428 OOGD01008970 [OOGD] marine metagenome; sea ice 648 576 - Val TAC [ENA] ¢þ
>WENV183624646 OOGD01078429 [OOGD] marine metagenome; sea ice 327 400 + Val TAC [ENA] ¢þ
>WENV183624955 OOGE01045325 [OOGE] marine metagenome; sea ice 522 449 - Val TAC [ENA] ¢þ
>WENV183625630 OOGG01004608 [OOGG] marine metagenome; sea ice 248 320 + Val TAC [ENA] ¢þ
>WENV183627554 OOGL01011912 [OOGL] marine metagenome; sea ice 627 699 + Val TAC [ENA] ¢þ
>WENV183628234 OOGN01000363 [OOGN] marine metagenome; sea ice 4180 4251 + Val TAC [ENA] ¢þ
>WENV183628447 OOGN01053461 [OOGN] marine metagenome; sea ice 133 206 + Val TAC [ENA] ¢þ
>WENV183628614 OOGO01003437 [OOGO] marine metagenome; sea ice 1669 1742 + Val TAC [ENA] ¢þ
>WENV183629841 OOGQ01020123 [OOGQ] marine metagenome; seawater 163 90 - Val TAC [ENA] ¢þ
>WENV183631084 OOGU01026982 [OOGU] marine metagenome; sea ice 789 716 - Val TAC [ENA] ¢þ
>ENV08001516 ABNF01027519 freshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton See, CA) 10 83 + Val TAC [ENA] ¡û
>WENV170024576 BCQL01077975 [BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa 533 460 - Val TAC [ENA] ¢þ
>WENV170567067 FLLY01038718 [FLLY] seawater metagenome; seawater 181 109 - Val TAC [ENA] ¢þ
>WENV170568726 FLMP01071408 [FLMP] seawater metagenome; seawater 955 882 - Val TAC [ENA] ¢þ
>WENV170639214 JFJP01001700 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 22764 22691 - Val TAC [ENA] ¢þ
>WENV170639236 JFJP01001704 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 4209 4282 + Val TAC [ENA] ¢þ
>WENV170639251 JFJP01001711 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 3919 3992 + Val TAC [ENA] ¢þ
>CHL1810000400 AP011960 Stramenopiles Fistulifera solaris JPCC DA0580 (AP011960) 114490 114417 - Val TAC [ENA] ¡û
>CHL1810002629 GU591327 Alveolata Durinskia baltica CS-38 (GU591327) 16821 16894 + Val TAC [ENA] ¡û
>CHL1810008316 KC509521 Stramenopiles Coscinodiscus radiatus ccmp310 (KC509521) 42672 42599 - Val TAC [ENA] ¡û
>CHL1810008372 KC509523 Stramenopiles Didymosphenia geminata BCC011 (KC509523) 16968 16897 - Val TAC [ENA] ¡û
>CHL1810013632 KJ958479 Stramenopiles Chaetoceros simplex (KJ958479) 55863 55790 - Val TAC [ENA] ¡û
>CHL1810013698 KJ958484 Stramenopiles Cerataulina daemon (KJ958484) 8299 8372 + Val TAC [ENA] ¡û
>CHL1810013725 KJ958485 Stramenopiles Thalassiosira weissflogii (KJ958485) 19636 19709 + Val TAC [ENA] ¡û
>CHL1810034287 KX619437 Stramenopiles Toxarium undulatum ECT3802 (KX619437) 46986 46913 - Val TAC [ENA] ¡û
>CHL1810059289 MG755793 Stramenopiles Rhizosolenia setigera (MG755793) 42746 42675 - Val TAC [ENA] ¡û
>CHL1810059399 MG755799 Stramenopiles Actinocyclus subtilis (MG755799) 43205 43132 - Val TAC [ENA] ¡û
>CHL1810059428 MG755800 Stramenopiles Entomoneis sp. (MG755800) 16765 16692 - Val TAC [ENA] ¡û
>CHL1810059452 MG755801 Stramenopiles Triceratium dubium (MG755801) 53506 53433 - Val TAC [ENA] ¡û
>CHL1810059514 MG755803 Stramenopiles Psammoneis obaidii (MG755803) 34976 34903 - Val TAC [ENA] ¡û
>CHL1810059517 MG755804 Stramenopiles Cyclotella pseudostelligera (MG755804) 19595 19668 + Val TAC [ENA] ¡û
>CHL090102744 EF067920 stramenopiles Phaeodactylum tricornutum 17042 16969 - Val TAC [ENA] ¡û
>CHL090102747 EF067921 stramenopiles Thalassiosira pseudonana 19666 19739 + Val TAC [ENA] ¡û
>CHL090103360 Z67753 stramenopiles Odontella sinensis 66555 66627 + Val TAC [ENA] ¡û
>SRA1001611 SRR001073.48862 Tilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton See, CA) (SRP000161) 10 83 + Val TAC [SRA]
>SRA1003621 SRR002327.71134 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 142 215 + Val TAC [SRA]
>SRA1004113 SRR002328.155627 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 81 8 - Val TAC [SRA]
Identical group No.670054 (3 seq.)
>WENV180636635 OCRF01026532 [OCRF] marine metagenome; niskin bottle 588 661 + Val TAC [ENA] ¢þ
>CHL1810002656 GU591328 Alveolata Kryptoperidinium foliaceum CCMP1326 (GU591328) 19504 19575 + Val TAC [ENA] ¡û
>CHL1810019280 KR709240 Stramenopiles Pseudo-nitzschia multiseries (KR709240) 56080 56153 + Val TAC [ENA] ¡û
Identical group No.706697 (2 seq.)
>CHL090101385 AY217738 Alveolata Eimeria tenella 32469 32540 + Val TAC [ENA] ¡û
>CHL090101395 AY217738 Alveolata Eimeria tenella 2253 2182 - Val TAC [ENA] ¡û
Identical group No.762139 (2 seq.)
>CHL090200160 U87145 Alveolata Toxoplasma gondii 32751 32822 + Val TAC [ENA] ¡û
>CHL090200162 U87145 Alveolata Toxoplasma gondii 2246 2175 - Val TAC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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