tRNA genes clustered and arranged according to each identical group

Bacterial carbon processing by generalist species in the coastal ocean. (SRP000056)

Anticodon = CCG

HIT: 3 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.306940 (20 seq.)
>WENV180042476 LQAF01000302 [LQAF] bioreactor metagenome; bioreactor_2 inoculated with Wadden Sea sediment; 2nd replicate of a sulfate-reducing system that 4417 4493 + Arg CCG [ENA]
>WENV180210295 OBAL01195724 [OBAL] marine metagenome; ENVO:00002019, 'BRACKISH WATER 162 238 + Arg CCG [ENA]
>WENV180368609 OBOF01151932 [OBOF] marine metagenome; ENVO:00002010 270 346 + Arg CCG [ENA]
>W141055186 AONB01000013 Gammaproteobacteria Nitrincola nitratireducens AK23 [AONB] 43119 43195 + Arg CCG [ENA]
>WENV180636608 OCRF01024152 [OCRF] marine metagenome; niskin bottle 223 147 - Arg CCG [ENA]
>WENV170150852 CEOC01162703 [CEOC] marine metagenome genome assembly TARA_036_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 188 112 - Arg CCG [ENA]
>WENV170167175 CEOO01183923 [CEOO] marine metagenome genome assembly TARA_036_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 513 589 + Arg CCG [ENA]
>WENV170626125 FUWD013214069 [FUWD] metagenome; unknown 297 221 - Arg CCG [ENA]
>WENV170655963 JTFN01103891 [JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating 20 96 + Arg CCG [ENA]
>WENV170656233 JTFO01005177 [JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater 3267 3191 - Arg CCG [ENA]
>WENV170657194 JTFO01099380 [JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater 256 180 - Arg CCG [ENA]
>WENV170658434 JTFP01112493 [JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater 470 394 - Arg CCG [ENA]
>WENV170837467 MDSZ01149782 [MDSZ] marine metagenome; seawater 29878 29954 + Arg CCG [ENA]
>W141557267 JHUZ01000014 Gammaproteobacteria Balneatrix alpica DSM 16621 [JHUZ] 132678 132754 + Arg CCG [ENA]
>W141712329 JMQN01000036 Gammaproteobacteria Marinobacterium lacunae AK27 [JMQN] 135015 134939 - Arg CCG [ENA]
>SRA1000061 SRR000285.14552 Bacterial carbon processing by generalist species in the coastal ocean. (SRP000056) 25 101 + Arg CCG [SRA]
>W1511349169 JRLB01000022 Gammaproteobacteria Nitrincola sp. A-D6 [JRLB] 9018 8942 - Arg CCG [ENA]
>WENV050688 AACY022894055 Marine microbial communities from Global Ocean Sampling (GOS) 724 648 - Arg CCG [ENA]
>WENV069194 AACY023756320 Marine microbial communities from Global Ocean Sampling (GOS) 1151 1227 + Arg CCG [ENA]
>WENV076742 AACY024108384 Marine microbial communities from Global Ocean Sampling (GOS) 997 921 - Arg CCG [ENA]
Identical group No.381051 (1 seq.)
>SRA1000056 SRR000285.4865 Bacterial carbon processing by generalist species in the coastal ocean. (SRP000056) 8 84 + Arg CCG [SRA]
Identical group No.812640 (1 seq.)
>SRA1000015 SRR000281.18016 Bacterial carbon processing by generalist species in the coastal ocean. (SRP000056) 21 94 + Arg CCG [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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