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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Euryarchaeota
Anticodon = GAT
HIT:
31 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.248070 (2 seq.)
>A171005695
CP009552
Euryarchaeota
Geoglobus acetivorans SBH6 [CP009552]
440596
440522
-
Ile
GAT
-
¡û
>A171006133
CP011267
Euryarchaeota
Geoglobus ahangari 234 [CP011267]
983858
983784
-
Ile
GAT
-
¡û
Identical group No.250604 (4 seq.)
>A173000138
CP004050
Euryarchaeota
Methanobrevibacter sp. AbM4 [CP004050]
306318
306243
-
Ile
GAT
-
¡û
>A173000139
CP004050
Euryarchaeota
Methanobrevibacter sp. AbM4 [CP004050]
306209
306134
-
Ile
GAT
-
¡û
>W1630001478
BAGX02000023
Euryarchaeota
Methanobrevibacter boviskoreani JH1 [BAGX]
87362
87285
-
Ile
GAT
[ENA]
¡û
>W1630001479
BAGX02000023
Euryarchaeota
Methanobrevibacter boviskoreani JH1 [BAGX]
87253
87176
-
Ile
GAT
[ENA]
¡û
Identical group No.250758 (2 seq.)
>A171001532
CP002057
Euryarchaeota
Methanococcus voltae [CP002057]
1255755
1255830
+
Ile
GAT
-
¡û
>W1610000608
ABHB01000001
Euryarchaeota
Methanococcus voltae A3 [ABHB]
318988
318913
-
Ile
GAT
[ENA]
¡û
Identical group No.250769 (2 seq.)
>A171001221
CP001899
Euryarchaeota
Ferroglobus placidus DSM 10642 [CP001899]
2108470
2108549
+
Ile
GAT
-
¡û
>W1610001621
ACYZ01000037
Euryarchaeota
Ferroglobus placidus DSM 10642 [ACYZ]
4375
4454
+
Ile
GAT
[ENA]
¡û
Identical group No.252655 (8 seq.)
>A171000274
CP000867
Euryarchaeota
Methanococcus maripaludis [CP000867]
1061183
1061108
-
Ile
GAT
-
¡û
>At1062
CP000609
Euryarchaeota
Methanococcus maripaludis C5 [CP000609]
27772
27698
-
Ile
GAT
[Ensembl]
¡û
>At1085
CP000745
Euryarchaeota
Methanococcus maripaludis [CP000745]
769262
769336
+
Ile
GAT
[Ensembl]
¡û
>At1159
CP000742
Euryarchaeota
Methanococcus vannielii SB [CP000742]
882075
882149
+
Ile
GAT
[Ensembl]
¡û
>W1610000337
AAWI01000004
Euryarchaeota
Methanococcus maripaludis C5 [AAWI]
97878
97953
+
Ile
GAT
[ENA]
¡û
>W1610000349
AAWX01000001
Euryarchaeota
Methanococcus vannielii SB [AAWX]
618645
618720
+
Ile
GAT
[ENA]
¡û
>W1610000463
AAZM01000001
Euryarchaeota
Methanococcus maripaludis C7 [AAZM]
219448
219373
-
Ile
GAT
[ENA]
¡û
>W1610000587
ABFP01000001
Euryarchaeota
Methanococcus maripaludis C6 [ABFP]
161956
161881
-
Ile
GAT
[ENA]
¡û
Identical group No.252722 (7 seq.)
>A171002182
CP002670
Euryarchaeota
Pyrococcus sp. NA2 [CP002670]
1727104
1727027
-
Ile
GAT
-
¡û
>A171002318
CP002779
Euryarchaeota
Pyrococcus yayanosii CH1 [CP002779]
443696
443619
-
Ile
GAT
-
¡û
>A171003271
CP003534
Euryarchaeota
Pyrococcus sp. ST04 [CP003534]
1196909
1196986
+
Ile
GAT
-
¡û
>A171005887
CP010835
Euryarchaeota
Pyrococcus kukulkanii NCB100 [CP010835]
1953291
1953214
-
Ile
GAT
-
¡û
>A171007502
LN999010
Euryarchaeota
Thermococcus chitonophagus [LN999010]
1397040
1397117
+
Ile
GAT
-
¡û
>At1813
AL096836
Euryarchaeota
Pyrococcus abyssi [AL096836]
1103101
1103024
-
Ile
GAT
[Ensembl]
¡û
>At1898
BA000001
Euryarchaeota
Pyrococcus horikoshii OT3 [BA000001]
1140795
1140718
-
Ile
GAT
[Ensembl]
¡û
Identical group No.256443 (1 seq.)
>A171001790
CP002278
Euryarchaeota
Methanothermus fervidus DSM 2088 [CP002278]
94814
94889
+
Ile
GAT
-
¡û
Identical group No.258322 (1 seq.)
>At1293
AE009439
Euryarchaeota
Methanopyrus kandleri AV19 [AE009439]
51735
51812
+
Ile
GAT
[Ensembl]
¡û
Identical group No.264338 (2 seq.)
>At2079
AM114193
Euryarchaeota
Methanocella arvoryzae MRE50 [AM114193]
2821338
2821433
+
Ile
GAT
[Ensembl]
¡û
>At2080
AM114193
Euryarchaeota
Methanocella arvoryzae MRE50 [AM114193]
2821549
2821644
+
Ile
GAT
[Ensembl]
¡û
Identical group No.265368 (1 seq.)
>A171003665
CP005290
Euryarchaeota
Archaeoglobus sulfaticallidus PM70-1 [CP005290]
1857354
1857430
+
Ile
GAT
-
¡û
Identical group No.268546 (1 seq.)
>A178000233
CP002588
Euryarchaeota
Archaeoglobus veneficus SNP6 [CP002588]
73965
74057
+
Ile
GAT
-
¡û
Identical group No.274426 (33 seq.)
>A171001114
CP001860
Euryarchaeota
Haloterrigena turkmenica DSM 5511 [CP001860]
512194
512267
+
Ile
GAT
-
¡û
>A171002702
CP003050
Euryarchaeota
Halovivax ruber XH-70 [CP003050]
1241694
1241767
+
Ile
GAT
-
¡û
>A171003058
CP003372
Euryarchaeota
Natrinema pellirubrum DSM 15624 [CP003372]
3415103
3415176
+
Ile
GAT
-
¡û
>A171003150
CP003412
Euryarchaeota
Natrinema sp. J7-2 [CP003412]
102970
103043
+
Ile
GAT
-
¡û
>A171003469
CP003929
Euryarchaeota
Natronococcus occultus SP4 [CP003929]
328406
328480
+
Ile
GAT
-
¡û
>W1910229810
FOFD01000003
Euryarchaeota
Natrinema salaciae DSM 25055 [FOFD]
703195
703122
-
Ile
GAT
[ENA]
¡û
>W1910229954
FOIS01000004
Euryarchaeota
Natrinema salifodinae CGMCC 1.12284 [FOIS]
239420
239494
+
Ile
GAT
[ENA]
¡û
>W1910568503
JDTG01000010
Euryarchaeota
Natrinema thermotolerans A29 [JDTG]
175486
175413
-
Ile
GAT
[ENA]
¡û
>W1910569068
JHUT02000003
Euryarchaeota
Natrinema mahii H13 [JHUT]
307856
307783
-
Ile
GAT
[ENA]
¡û
>W1910572726
JNCS01000010
Euryarchaeota
Natrinema altunense AJ2 [JNCS]
64968
65041
+
Ile
GAT
[ENA]
¡û
>W1910575901
JROF01000052
Euryarchaeota
Natrinema salifodinae KCY07-B2 [JROF]
7163
7089
-
Ile
GAT
[ENA]
¡û
>W1910583008
JXAN01000029
Euryarchaeota
Natrinema altunense 1A4-DGR [JXAN]
13016
13089
+
Ile
GAT
[ENA]
¡û
>W1910646123
LWLN01000001
Euryarchaeota
Natrinema saccharevitans AB14 [LWLN]
2877879
2877953
+
Ile
GAT
[ENA]
¡û
>W1911433989
NXNI01000001
Euryarchaeota
Natrinema ejinorense JCM 13890 [NXNI]
3292708
3292635
-
Ile
GAT
[ENA]
¡û
>W1911572210
PDBS01000001
Euryarchaeota
Natrinema sp. CBA1119 [PDBS]
1148811
1148884
+
Ile
GAT
[ENA]
¡û
>W1911709991
QPND01000011
Euryarchaeota
Saliphagus sp. LR7 [QPND]
123641
123568
-
Ile
GAT
[ENA]
¡û
>W1610004156
AGIN01000016
Euryarchaeota
Natrinema pellirubrum DSM 15624 [AGIN]
47427
47354
-
Ile
GAT
[ENA]
¡û
>W1610005351
AJVG01000001
Euryarchaeota
Natrinema sp. J7-1 [AJVG]
6779
6852
+
Ile
GAT
[ENA]
¡û
>W1610012104
AOIA01000167
Euryarchaeota
Natronococcus jeotgali DSM 18795 [AOIA]
87065
86992
-
Ile
GAT
[ENA]
¡û
>W1610012122
AOIB01000014
Euryarchaeota
Natronococcus amylolyticus DSM 10524 [AOIB]
120600
120526
-
Ile
GAT
[ENA]
¡û
>W1610012220
AOID01000048
Euryarchaeota
Natrinema versiforme JCM 10478 [AOID]
139958
139885
-
Ile
GAT
[ENA]
¡û
>W1610012265
AOIE01000102
Euryarchaeota
Natrinema pellirubrum DSM 15624 [AOIE]
72472
72545
+
Ile
GAT
[ENA]
¡û
>W1610012282
AOII01000019
Euryarchaeota
Natrinema pallidum DSM 3751 [AOII]
22944
23017
+
Ile
GAT
[ENA]
¡û
>W1610012356
AOIJ01000057
Euryarchaeota
Natrinema gari JCM 14663 [AOIJ]
23574
23501
-
Ile
GAT
[ENA]
¡û
>W1610012405
AOIK01000037
Euryarchaeota
Natrinema altunense JCM 12890 [AOIK]
23769
23696
-
Ile
GAT
[ENA]
¡û
>W1610012440
AOIL01000049
Euryarchaeota
Natrialba taiwanensis DSM 12281 [AOIL]
104544
104617
+
Ile
GAT
[ENA]
¡û
>W1610012568
AOIO01000035
Euryarchaeota
Natrialba asiatica DSM 12278 [AOIO]
18246
18173
-
Ile
GAT
[ENA]
¡û
>W1610012595
AOIP01000015
Euryarchaeota
Natrialba aegyptia DSM 13077 [AOIP]
473435
473362
-
Ile
GAT
[ENA]
¡û
>W1610012630
AOIQ01000006
Euryarchaeota
Halovivax asiaticus JCM 14624 [AOIQ]
310469
310393
-
Ile
GAT
[ENA]
¡û
>W1610012684
AOIR01000053
Euryarchaeota
Natrinema thermotolerans DSM 11522 [AOIR]
152462
152389
-
Ile
GAT
[ENA]
¡û
>W1610012715
AOIS01000011
Euryarchaeota
Haloterrigena salina JCM 13891 [AOIS]
1112
1039
-
Ile
GAT
[ENA]
¡û
>W1610012758
AOIT01000010
Euryarchaeota
Natrinema limicola JCM 13563 [AOIT]
69522
69448
-
Ile
GAT
[ENA]
¡û
>W1610082982
CBMA010000025
Euryarchaeota
Halopiger djelfimassiliensis IIH2 [CBMA]
226718
226644
-
Ile
GAT
[ENA]
¡û
Identical group No.274444 (11 seq.)
>A171003089
CP003377
Euryarchaeota
Natronobacterium gregoryi SP2 [CP003377]
1142565
1142639
+
Ile
GAT
-
¡û
>A171006944
CP019285
Euryarchaeota
Halobiforma lacisalsi AJ5 [CP019285]
478335
478261
-
Ile
GAT
-
¡û
>W1910230230
FOKW01000001
Euryarchaeota
Halobiforma haloterrestris DSM 13078 [FOKW]
144964
145038
+
Ile
GAT
[ENA]
¡û
>W1910230451
FORO01000018
Euryarchaeota
Natronobacterium gregoryi SP2 [FORO]
7739
7665
-
Ile
GAT
[ENA]
¡û
>W1911591339
PKKI01000028
Euryarchaeota
Natronobacterium gregoryi SP2 [PKKI]
7666
7592
-
Ile
GAT
[ENA]
¡û
>W1610004048
AGFZ01000022
Euryarchaeota
Halobiforma lacisalsi AJ5 [AGFZ]
9762
9836
+
Ile
GAT
[ENA]
¡û
>W1610004083
AGIM01000004
Euryarchaeota
Natronobacterium gregoryi SP2 [AGIM]
74957
75033
+
Ile
GAT
[ENA]
¡û
>W1610012182
AOIC01000109
Euryarchaeota
Natronobacterium gregoryi SP2 [AOIC]
7820
7744
-
Ile
GAT
[ENA]
¡û
>W1610014428
AOLZ01000042
Euryarchaeota
Halobiforma lacisalsi AJ5 [AOLZ]
115920
115994
+
Ile
GAT
[ENA]
¡û
>W1610014456
AOMA01000063
Euryarchaeota
Halobiforma nitratireducens JCM 10879 [AOMA]
71552
71626
+
Ile
GAT
[ENA]
¡û
>W1610083016
CBMB010000003
Euryarchaeota
Halopiger goleimassiliensis IIH3 [CBMB]
195279
195205
-
Ile
GAT
[ENA]
¡û
Identical group No.274463 (3 seq.)
>A171000793
CP001688
Euryarchaeota
Halomicrobium mukohataei DSM 12286 [CP001688]
1505642
1505569
-
Ile
GAT
-
¡û
>W1610000801
ABTY01000001
Euryarchaeota
Halomicrobium mukohataei DSM 12286 [ABTY]
2221071
2221144
+
Ile
GAT
[ENA]
¡û
>W1610018978
AQZY01000010
Euryarchaeota
Halomicrobium katesii DSM 19301 [AQZY]
286005
286078
+
Ile
GAT
[ENA]
¡û
Identical group No.274780 (9 seq.)
>A171007446
LN831302
Euryarchaeota
Halobacterium hubeiense JI20-1 [LN831302]
2034645
2034719
+
Ile
GAT
-
¡û
>W1610061866
BCMZ01000001
Euryarchaeota
Halobacterium sp. CBA1132 [BCMZ]
2066205
2066279
+
Ile
GAT
[ENA]
¡û
>W1610085064
CEML01000001
Euryarchaeota
Halobacterium hubeiense JI20-4 [CEML]
793543
793617
+
Ile
GAT
[ENA]
¡û
>W1610085129
CEMN01000001
Euryarchaeota
Halobacterium hubeiense JI20-3 [CEMN]
666102
666028
-
Ile
GAT
[ENA]
¡û
>W1610085168
CEMO01000001
Euryarchaeota
Halobacterium hubeiense JI20-2 [CEMO]
708857
708783
-
Ile
GAT
[ENA]
¡û
>W1610085207
CEMP01000001
Euryarchaeota
Halobacterium hubeiense JI20-6 [CEMP]
707932
707858
-
Ile
GAT
[ENA]
¡û
>W1610085230
CEMQ01000001
Euryarchaeota
Halobacterium hubeiense JI20-7 [CEMQ]
1850866
1850940
+
Ile
GAT
[ENA]
¡û
>W1610085263
CEMR01000001
Euryarchaeota
Halobacterium hubeiense JI20-5 [CEMR]
793609
793683
+
Ile
GAT
[ENA]
¡û
>W1610085312
CEMZ01000001
Euryarchaeota
Halobacterium hubeiense JI20-8 [CEMZ]
1807447
1807521
+
Ile
GAT
[ENA]
¡û
Identical group No.275040 (54 seq.)
>A171001432
CP001994
Euryarchaeota
Methanohalophilus mahii DSM 5219 [CP001994]
432729
432805
+
Ile
GAT
-
¡û
>A171004350
CP008746
Euryarchaeota
Methanosarcina barkeri CM1 [CP008746]
2418621
2418697
+
Ile
GAT
-
¡û
>A171004746
CP009505
Euryarchaeota
Methanosarcina sp. MTP4 [CP009505]
3009038
3008962
-
Ile
GAT
-
¡û
>A171004747
CP009505
Euryarchaeota
Methanosarcina sp. MTP4 [CP009505]
3008892
3008818
-
Ile
GAT
-
¡û
>A171004810
CP009506
Euryarchaeota
Methanosarcina siciliae T4/M [CP009506]
1432150
1432074
-
Ile
GAT
-
¡û
>A171005072
CP009512
Euryarchaeota
Methanosarcina mazei S-6 [CP009512]
1092278
1092205
-
Ile
GAT
-
¡û
>A171005425
CP009520
Euryarchaeota
Methanosarcina vacuolata Z-761 [CP009520]
3599245
3599169
-
Ile
GAT
-
¡û
>A171005481
CP009524
Euryarchaeota
Methanosarcina sp. Kolksee [CP009524]
3603931
3603855
-
Ile
GAT
-
¡û
>A171005532
CP009526
Euryarchaeota
Methanosarcina barkeri str. Wiesmoor [CP009526]
3629640
3629564
-
Ile
GAT
-
¡û
>A171005533
CP009526
Euryarchaeota
Methanosarcina barkeri str. Wiesmoor [CP009526]
3629489
3629413
-
Ile
GAT
-
¡û
>A171005602
CP009528
Euryarchaeota
Methanosarcina barkeri MS [CP009528]
932310
932234
-
Ile
GAT
-
¡û
>A171005617
CP009530
Euryarchaeota
Methanosarcina barkeri 227 [CP009530]
2153808
2153884
+
Ile
GAT
-
¡û
>A171006824
CP017921
Euryarchaeota
Methanohalophilus halophilus Z-7982 [CP017921]
286370
286294
-
Ile
GAT
-
¡û
>At1446
CP000099
Euryarchaeota
Methanosarcina barkeri [CP000099]
2435508
2435584
+
Ile
GAT
[Ensembl]
¡û
>At1447
CP000099
Euryarchaeota
Methanosarcina barkeri [CP000099]
2435659
2435735
+
Ile
GAT
[Ensembl]
¡û
>W1910228309
FNMU01000001
Euryarchaeota
Methanohalophilus halophilus Z-7982 [FNMU]
100590
100514
-
Ile
GAT
[ENA]
¡û
>W1910471798
FXBN01000001
Euryarchaeota
Methanohalophilus portucalensis FDF-1 [FXBN]
626750
626674
-
Ile
GAT
[ENA]
¡û
>W1910569473
JJOV01000090
Euryarchaeota
Methanosarcina sp. 2.H.A.1B.4 [JJOV]
219990
220066
+
Ile
GAT
[ENA]
¡û
>W1910569474
JJOV01000090
Euryarchaeota
Methanosarcina sp. 2.H.A.1B.4 [JJOV]
220143
220219
+
Ile
GAT
[ENA]
¡û
>W1910569513
JJOW01000215
Euryarchaeota
Methanosarcina sp. 2.H.T.1A.15 [JJOW]
7486
7412
-
Ile
GAT
[ENA]
¡û
>W1910569537
JJOX01000027
Euryarchaeota
Methanosarcina sp. 2.H.T.1A.3 [JJOX]
16406
16332
-
Ile
GAT
[ENA]
¡û
>W1910569624
JJOY01000051
Euryarchaeota
Methanosarcina sp. 2.H.T.1A.6 [JJOY]
13441
13515
+
Ile
GAT
[ENA]
¡û
>W1910569668
JJOZ01000055
Euryarchaeota
Methanosarcina sp. 2.H.T.1A.8 [JJOZ]
1638
1712
+
Ile
GAT
[ENA]
¡û
>W1910569691
JJPA01000060
Euryarchaeota
Methanosarcina mazei 3.F.A.1A.1 [JJPA]
13081
13008
-
Ile
GAT
[ENA]
¡û
>W1910569774
JJPB01000122
Euryarchaeota
Methanosarcina mazei 3.F.A.1A.3 [JJPB]
30598
30671
+
Ile
GAT
[ENA]
¡û
>W1910569883
JJPD01000185
Euryarchaeota
Methanosarcina mazei 3.F.A.2.12 [JJPD]
7087
7014
-
Ile
GAT
[ENA]
¡û
>W1910569925
JJPE01000126
Euryarchaeota
Methanosarcina mazei 3.F.A.2.3 [JJPE]
12837
12764
-
Ile
GAT
[ENA]
¡û
>W1910569973
JJPF01000085
Euryarchaeota
Methanosarcina mazei 3.F.A.2.5 [JJPF]
13102
13029
-
Ile
GAT
[ENA]
¡û
>W1910570027
JJPG01000141
Euryarchaeota
Methanosarcina mazei 3.F.A.2.6 [JJPG]
31945
32018
+
Ile
GAT
[ENA]
¡û
>W1910570067
JJPH01000071
Euryarchaeota
Methanosarcina mazei 3.F.A.2.7 [JJPH]
30598
30671
+
Ile
GAT
[ENA]
¡û
>W1910570254
JJPL01000055
Euryarchaeota
Methanosarcina mazei 3.F.T.2.1 [JJPL]
87875
87948
+
Ile
GAT
[ENA]
¡û
>W1910570327
JJPM01000195
Euryarchaeota
Methanosarcina mazei 3.H.A.1A.1 [JJPM]
2993
2920
-
Ile
GAT
[ENA]
¡û
>W1910570463
JJPP01000045
Euryarchaeota
Methanosarcina mazei 3.H.A.2.4 [JJPP]
8388
8461
+
Ile
GAT
[ENA]
¡û
>W1910570721
JJPU01000104
Euryarchaeota
Methanosarcina mazei 3.H.M.1B.1 [JJPU]
12786
12713
-
Ile
GAT
[ENA]
¡û
>W1910570765
JJPV01000035
Euryarchaeota
Methanosarcina mazei 3.H.M.1B.2 [JJPV]
18337
18264
-
Ile
GAT
[ENA]
¡û
>W1910570832
JJPW01000056
Euryarchaeota
Methanosarcina mazei 3.H.M.1B.5 [JJPW]
60232
60305
+
Ile
GAT
[ENA]
¡û
>W1910571030
JJQA01000089
Euryarchaeota
Methanosarcina mazei 1.F.A.1A.3 [JJQA]
109801
109874
+
Ile
GAT
[ENA]
¡û
>W1910571057
JJQB01000023
Euryarchaeota
Methanosarcina mazei 1.F.A.1B.3 [JJQB]
108466
108539
+
Ile
GAT
[ENA]
¡û
>W1910571146
JJQC01000148
Euryarchaeota
Methanosarcina mazei 1.F.A.1B.4 [JJQC]
17364
17291
-
Ile
GAT
[ENA]
¡û
>W1910571152
JJQD01000005
Euryarchaeota
Methanosarcina mazei 1.F.A.2.8 [JJQD]
62401
62474
+
Ile
GAT
[ENA]
¡û
>W1910571240
JJQE01000154
Euryarchaeota
Methanosarcina mazei 1.F.M.0.5 [JJQE]
30731
30804
+
Ile
GAT
[ENA]
¡û
>W1910571411
JJQI01000005
Euryarchaeota
Methanosarcina mazei 1.H.A.1A.4 [JJQI]
30753
30826
+
Ile
GAT
[ENA]
¡û
>W1910571516
JJQK01000041
Euryarchaeota
Methanosarcina mazei 1.H.A.2.1 [JJQK]
1261
1188
-
Ile
GAT
[ENA]
¡û
>W1910571609
JJQL01000089
Euryarchaeota
Methanosarcina sp. 1.H.A.2.2 [JJQL]
103583
103507
-
Ile
GAT
[ENA]
¡û
>W1910572285
JJQY01000140
Euryarchaeota
Methanosarcina sp. 1.H.T.1A.1 [JJQY]
6976
6900
-
Ile
GAT
[ENA]
¡û
>W1910582967
JWTK01000002
Euryarchaeota
Methanohalophilus portucalensis FDF-1 [JWTK]
383218
383294
+
Ile
GAT
[ENA]
¡û
>W1910635271
LMVP01000516
Euryarchaeota
Methanosarcina spelaei MC-15 [LMVP]
14592
14516
-
Ile
GAT
[ENA]
¡û
>W1910655408
LZPK01000374
Euryarchaeota
Methanosarcina sp. A14 [LZPK]
2295
2371
+
Ile
GAT
[ENA]
¡û
>W1911633759
PVBU01000004
Euryarchaeota
Methanohalophilus euhalobius DSM 10369 [PVBU]
32081
32005
-
Ile
GAT
[ENA]
¡û
>W1610000021
AAAR03000004
Euryarchaeota
Methanosarcina barkeri str. fusaro [AAAR]
207991
208067
+
Ile
GAT
[ENA]
¡û
>W1610000022
AAAR03000004
Euryarchaeota
Methanosarcina barkeri str. fusaro [AAAR]
208142
208218
+
Ile
GAT
[ENA]
¡û
>W1610048627
BBEF01000222
Euryarchaeota
Methanosarcina barkeri JCM 10043 [BBEF]
967
891
-
Ile
GAT
[ENA]
¡û
>W1610919859
LSRU01000020
Euryarchaeota
Methanohalophilus sp. T328-1 [LSRU]
11077
11001
-
Ile
GAT
[ENA]
¡û
>W1611052505
MAFX01000027
Euryarchaeota
Methanohalophilus sp. DAL1 [MAFX]
4485
4561
+
Ile
GAT
[ENA]
¡û
Identical group No.281627 (3 seq.)
>At1632
CP000254
Euryarchaeota
Methanospirillum hungatei JF-1 [CP000254]
2609678
2609605
-
Ile
GAT
[Ensembl]
¡û
>W1610000162
AALU01000001
Euryarchaeota
Methanospirillum hungatei JF-1 [AALU]
99796
99869
+
Ile
GAT
[ENA]
¡û
>W1610946067
LUYJ01000376
Euryarchaeota
Methanomicrobiales archaeon Methan_06 [LUYJ]
486
559
+
Ile
GAT
[ENA]
¡û
Identical group No.298876 (41 seq.)
>A171000809
CP001690
Euryarchaeota
Halogeometricum borinquense DSM 11551 PR 3 [CP001690]
708838
708913
+
Ile
GAT
-
¡û
>A171001179
CP001868
Euryarchaeota
Haloferax mediterranei ATCC 33500 CGMCC 1.2087 [CP001868]
2284809
2284735
-
Ile
GAT
-
¡û
>A171001395
CP001956
Euryarchaeota
Haloferax volcanii DS2 [CP001956]
2217987
2218061
+
Ile
GAT
-
¡û
>A171006205
CP011947
Euryarchaeota
Haloferax gibbonsii ARA6 [CP011947]
2305017
2305091
+
Ile
GAT
-
¡û
>W1910186216
CCDK010000001
Euryarchaeota
Haloferax prahovense Arc-Hr [CCDK]
642221
642299
+
Ile
GAT
[ENA]
¡û
>W1910193565
CSTE01000006
Euryarchaeota
Haloferax massiliensis Arc-Hr [CSTE]
223622
223544
-
Ile
GAT
[ENA]
¡û
>W1910229629
FOAD01000005
Euryarchaeota
Haloferax larsenii CDM_5 [FOAD]
218716
218642
-
Ile
GAT
[ENA]
¡û
>W1910573474
JPES01000005
Euryarchaeota
Haloferax sp. ATB1 [JPES]
1404
1478
+
Ile
GAT
[ENA]
¡û
>W1911629784
PSYS01000002
Euryarchaeota
Haloferax sp. Atlit-47N [PSYS]
154488
154410
-
Ile
GAT
[ENA]
¡û
>W1911629836
PSYT01000002
Euryarchaeota
Haloferax sp. Atlit-24N [PSYT]
542459
542385
-
Ile
GAT
[ENA]
¡û
>W1911629860
PSYU01000001
Euryarchaeota
Haloferax sp. Atlit-19N [PSYU]
545610
545536
-
Ile
GAT
[ENA]
¡û
>W1911629935
PSYV01000002
Euryarchaeota
Haloferax sp. Atlit-16N [PSYV]
713057
712983
-
Ile
GAT
[ENA]
¡û
>W1911629984
PSYW01000002
Euryarchaeota
Haloferax sp. Atlit-12N [PSYW]
555447
555373
-
Ile
GAT
[ENA]
¡û
>W1911630027
PSYX01000002
Euryarchaeota
Haloferax sp. Atlit-10N [PSYX]
629885
629959
+
Ile
GAT
[ENA]
¡û
>W1911630086
PSYY01000002
Euryarchaeota
Haloferax sp. Atlit-4N [PSYY]
554744
554670
-
Ile
GAT
[ENA]
¡û
>W1911655697
QEQI01000002
Euryarchaeota
Haloferax sp. Atlit-48N [QEQI]
287954
288028
+
Ile
GAT
[ENA]
¡û
>W1911655746
QEQJ01000002
Euryarchaeota
Haloferax sp. Atlit-6N [QEQJ]
390617
390543
-
Ile
GAT
[ENA]
¡û
>W1911682218
QKMU01000001
Euryarchaeota
Halogeometricum sp. wsp3 [QKMU]
2868099
2868174
+
Ile
GAT
[ENA]
¡û
>W1911709516
QPLO01000002
Euryarchaeota
Haloferax sp. Atlit-109R [QPLO]
542459
542385
-
Ile
GAT
[ENA]
¡û
>W1911709564
QPLP01000002
Euryarchaeota
Haloferax sp. Atlit-105R [QPLP]
542459
542385
-
Ile
GAT
[ENA]
¡û
>C151003915
CP002988
Euryarchaeota
halophilic archaeon DL31 [CP002988]
2031991
2032069
+
Ile
GAT
[Ensembl]
¡û
>W1610000753
ABTX01000001
Euryarchaeota
Halogeometricum borinquense DSM 11551 [ABTX]
1916029
1916104
+
Ile
GAT
[ENA]
¡û
>W1610011514
ANPG01000186
Euryarchaeota
Haloferax sp. BAB-2207 BAB2207 [ANPG]
5828
5906
+
Ile
GAT
[ENA]
¡û
>W1610011768
AOHT01000032
Euryarchaeota
Halogeometricum borinquense DSM 11551 [AOHT]
5745
5670
-
Ile
GAT
[ENA]
¡û
>W1610011802
AOHU01000044
Euryarchaeota
Haloferax volcanii DS2 [AOHU]
20627
20701
+
Ile
GAT
[ENA]
¡û
>W1610013484
AOLD01000043
Euryarchaeota
Haloferax sp. ATCC BAA-646 [AOLD]
130438
130512
+
Ile
GAT
[ENA]
¡û
>W1610013505
AOLE01000010
Euryarchaeota
Haloferax sp. ATCC BAA-645 [AOLE]
122688
122762
+
Ile
GAT
[ENA]
¡û
>W1610013567
AOLF01000022
Euryarchaeota
Haloferax sp. ATCC BAA-644 [AOLF]
49297
49371
+
Ile
GAT
[ENA]
¡û
>W1610013642
AOLG01000048
Euryarchaeota
Haloferax prahovense DSM 18310 [AOLG]
26467
26393
-
Ile
GAT
[ENA]
¡û
>W1610013664
AOLH01000009
Euryarchaeota
Haloferax lucentense DSM 14919 [AOLH]
14588
14514
-
Ile
GAT
[ENA]
¡û
>W1610013716
AOLI01000019
Euryarchaeota
Haloferax larsenii JCM 13917 [AOLI]
178321
178395
+
Ile
GAT
[ENA]
¡û
>W1610013781
AOLJ01000015
Euryarchaeota
Haloferax gibbonsii ATCC 33959 [AOLJ]
189795
189721
-
Ile
GAT
[ENA]
¡û
>W1610013843
AOLK01000022
Euryarchaeota
Haloferax elongans ATCC BAA-1513 [AOLK]
298963
298889
-
Ile
GAT
[ENA]
¡û
>W1610013892
AOLL01000029
Euryarchaeota
Haloferax alexandrinus JCM 10717 [AOLL]
49174
49248
+
Ile
GAT
[ENA]
¡û
>W1610013921
AOLM01000012
Euryarchaeota
Haloferax sulfurifontis ATCC BAA-897 [AOLM]
13387
13461
+
Ile
GAT
[ENA]
¡û
>W1610013961
AOLN01000006
Euryarchaeota
Haloferax mucosum ATCC BAA-1512 [AOLN]
140854
140780
-
Ile
GAT
[ENA]
¡û
>W1610014039
AOLO01000011
Euryarchaeota
Haloferax mediterranei ATCC 33500 [AOLO]
176790
176864
+
Ile
GAT
[ENA]
¡û
>W1610014079
AOLP01000012
Euryarchaeota
Haloferax denitrificans ATCC 35960 [AOLP]
39304
39378
+
Ile
GAT
[ENA]
¡û
>W1610784302
LOEP01000027
Euryarchaeota
Haloferax sp. Q22 [LOEP]
250721
250647
-
Ile
GAT
[ENA]
¡û
>W1610799838
LOPV01000135
Euryarchaeota
Haloferax profundi SB29 [LOPV]
2858
2932
+
Ile
GAT
[ENA]
¡û
>W1610799876
LOPW01000014
Euryarchaeota
Haloferax marisrubri SB3 [LOPW]
6889
6967
+
Ile
GAT
[ENA]
¡û
Identical group No.322032 (2 seq.)
>A171004409
CP008874
Euryarchaeota
Halanaeroarchaeum sulfurireducens HSR2 [CP008874]
1845950
1845877
-
Ile
GAT
-
¡û
>A171006167
CP011564
Euryarchaeota
Halanaeroarchaeum sulfurireducens M27-SA2 [CP011564]
1846058
1845985
-
Ile
GAT
-
¡û
Identical group No.324166 (2 seq.)
>A171000014
AM774415
Euryarchaeota
Halobacterium salinarum R1 DSM 671 [AM774415]
1401930
1402004
+
Ile
GAT
-
¡û
>At0808
AE004437
Euryarchaeota
Halobacterium salinarum NRC-1; ATCC 700922 [AE004437]
1412690
1412763
+
Ile
GAT
[Ensembl]
¡û
Identical group No.372480 (2 seq.)
>At1363
CP000477
Euryarchaeota
Methanothrix thermoacetophila PT [CP000477]
915515
915442
-
Ile
GAT
[Ensembl]
¡û
>W1610000219
AAOR01000001
Euryarchaeota
Methanothrix thermoacetophila PT [AAOR]
152045
151972
-
Ile
GAT
[ENA]
¡û
Identical group No.391781 (2 seq.)
>A171004182
CP007060
Euryarchaeota
Halobacterium sp. DL1 [CP007060]
2425925
2425999
+
Ile
GAT
-
¡û
>W1610004187
AGIR01000001
Euryarchaeota
Halobacterium sp. DL1 [AGIR]
932555
932481
-
Ile
GAT
[ENA]
¡û
Identical group No.391897 (2 seq.)
>A171006884
CP019067
Euryarchaeota
Halorientalis sp. IM1011 [CP019067]
2242616
2242542
-
Ile
GAT
-
¡û
>W1910226745
FNBK01000012
Euryarchaeota
Halorientalis regularis IBRC-M 10760 [FNBK]
114083
114009
-
Ile
GAT
[ENA]
¡û
Identical group No.399198 (2 seq.)
>A171007250
HF571520
Euryarchaeota
Halorhabdus tiamatea SARL4B type strain: SARL4B [HF571520]
2013113
2013039
-
Ile
GAT
-
¡û
>W1610003257
AFNT02000004
Euryarchaeota
Halorhabdus tiamatea SARL4B [AFNT]
321
245
-
Ile
GAT
[ENA]
¡û
Identical group No.407501 (1 seq.)
>A171002842
CP003167
Euryarchaeota
Methanoregula formicica SMSP [CP003167]
2607629
2607702
+
Ile
GAT
-
¡û
Identical group No.415935 (1 seq.)
>A171005354
CP009518
Euryarchaeota
Methanococcoides methylutens MM1 [CP009518]
442107
442183
+
Ile
GAT
-
¡û
Identical group No.422920 (1 seq.)
>A171002996
CP003362
Euryarchaeota
Methanomethylovorans hollandica DSM 15978 [CP003362]
702513
702587
+
Ile
GAT
-
¡û
Identical group No.446328 (1 seq.)
>A171000966
CP001719
Euryarchaeota
Methanobrevibacter ruminantium M1 [CP001719]
361457
361382
-
Ile
GAT
-
¡û
Identical group No.446329 (1 seq.)
>A171001082
CP001857
Euryarchaeota
Archaeoglobus profundus DSM 5631 [CP001857]
980705
980781
+
Ile
GAT
-
¡û
Identical group No.485701 (2 seq.)
>A171002271
CP002772
Euryarchaeota
Methanobacterium paludis SWAN1 [CP002772]
646888
646814
-
Ile
GAT
-
¡û
>A171007683
LT607756
Euryarchaeota
Methanobacterium congolense [LT607756]
615641
615569
-
Ile
GAT
-
¡û
Identical group No.574231 (1 seq.)
>A171007335
HG425166
Euryarchaeota
Methanobacterium sp. MB1 [HG425166]
614107
614035
-
Ile
GAT
-
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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