tRNA genes clustered and arranged according to each identical group

Freshwater sediment metagenome lwFormaldehyde_C1

Anticodon = GCT

HIT: 13 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.6556 (5 seq.)
>W1711585379 MNZQ01000100 Thermodesulfobacteriota Syntrophaceae bacterium CG2_30_58_14 [MNZQ] 25947 26041 + Ser GCT [ENA] ¡û
>WENV170006336 AMWB02016711 [AMWB] bioreactor metagenome; anode biofilm in microbial fuel cells 95 1 - Ser GCT [ENA] ¢þ
>WENV170671483 LAHU01065067 [LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from 50 144 + Ser GCT [ENA] ¢þ
>WENV170976011 MTKZ01003817 [MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 7602 7508 - Ser GCT [ENA] ¢þ
>ENV09000075 ABSN01006024 Freshwater sediment metagenome lwFormaldehyde_C1 646 740 + Ser GCT [ENA] ¡û
Identical group No.8443 (5 seq.)
>W131163872 ARAC01000001 Betaproteobacteria Methylophilus sp. 42 [ARAC] 1026860 1026953 + Ser GCT [ENA] ¡û
>W131170279 ARFK01000004 Betaproteobacteria Methylophilus sp. 1 [ARFK] 447751 447844 + Ser GCT [ENA] ¡û
>W141231893 BAUS01000002 Betaproteobacteria Methylophilus sp. OH31 [BAUS] 443909 444002 + Ser GCT [ENA] ¡û
>ENV09000016 ABSN01000619 Freshwater sediment metagenome lwFormaldehyde_C1 577 670 + Ser GCT [ENA] ¡û
>W1511433419 JUHE01000001 Betaproteobacteria Methylophilus sp. Q8 [JUHE] 175575 175482 - Ser GCT [ENA] ¡û
Identical group No.12104 (1 seq.)
>ENV09000304 ABSN01047592 Freshwater sediment metagenome lwFormaldehyde_C1 339 246 - Ser GCT [ENA] ¡û
Identical group No.12105 (1 seq.)
>ENV09000328 ABSN01052868 Freshwater sediment metagenome lwFormaldehyde_C1 42 135 + Ser GCT [ENA] ¡û
Identical group No.12106 (1 seq.)
>ENV09000410 ABSN01065735 Freshwater sediment metagenome lwFormaldehyde_C1 297 388 + Ser GCT [ENA] ¡û
Identical group No.19645 (1 seq.)
>ENV09000001 ABSN01000012 Freshwater sediment metagenome lwFormaldehyde_C1 696 604 - Ser GCT [ENA] ¡û
Identical group No.19646 (1 seq.)
>ENV09000106 ABSN01011520 Freshwater sediment metagenome lwFormaldehyde_C1 572 661 + Ser GCT [ENA] ¡û
Identical group No.19647 (1 seq.)
>ENV09000162 ABSN01020870 Freshwater sediment metagenome lwFormaldehyde_C1 519 429 - Ser GCT [ENA] ¡û
Identical group No.19649 (1 seq.)
>ENV09000366 ABSN01058483 Freshwater sediment metagenome lwFormaldehyde_C1 598 506 - Ser GCT [ENA] ¡û
Identical group No.26801 (12 seq.)
>W1711081798 LSTC01000024 Nitrospirota Nitrospira sp. SCGC AG-212-E16 [LSTC] 30029 30120 + Ser GCT [ENA] ¡û
>WENV180247524 OBEQ010036980 [OBEQ] groundwater metagenome; groundwater 65054 64963 - Ser GCT [ENA] ¢þ
>WENV181184933 OEKW01000613 [OEKW] metagenome; 1998 14363 14272 - Ser GCT [ENA] ¢þ
>WENV183694791 ORMF012291212 [ORMF] groundwater metagenome; groundwater 111 20 - Ser GCT [ENA] ¢þ
>WENV170555405 CXWL01000491 [CXWL] groundwater metagenome; biofilm material 23167 23076 - Ser GCT [ENA] ¢þ
>WENV170555614 CXWL01001428 [CXWL] groundwater metagenome; biofilm material 20800 20891 + Ser GCT [ENA] ¢þ
>WENV170555615 CXWL01001429 [CXWL] groundwater metagenome; biofilm material 5190 5281 + Ser GCT [ENA] ¢þ
>WENV170555616 CXWL01001430 [CXWL] groundwater metagenome; biofilm material 917 1008 + Ser GCT [ENA] ¢þ
>WENV170557338 CXWL01024441 [CXWL] groundwater metagenome; biofilm material 4856 4765 - Ser GCT [ENA] ¢þ
>WENV170557913 CXWL01042452 [CXWL] groundwater metagenome; biofilm material 1863 1954 + Ser GCT [ENA] ¢þ
>ENV09000029 ABSN01001706 Freshwater sediment metagenome lwFormaldehyde_C1 201 292 + Ser GCT [ENA] ¡û
>W1610920633 LSTC01000024 Nitrospirota Nitrospira sp. SCGC AG-212-E16 [LSTC] 30029 30120 + Ser GCT [ENA] ¡û
Identical group No.30021 (1 seq.)
>ENV09000236 ABSN01035868 Freshwater sediment metagenome lwFormaldehyde_C1 729 820 + Ser GCT [ENA] ¡û
Identical group No.56419 (3 seq.)
>WENV180275160 OBHS01029045 [OBHS] metagenome; freshwater sediment 110 198 + Ser GCT [ENA] ¢þ
>CHL1810008352 KC509523 Stramenopiles Didymosphenia geminata BCC011 (KC509523) 17744 17833 + Ser GCT [ENA] ¡û
>ENV09000025 ABSN01001437 Freshwater sediment metagenome lwFormaldehyde_C1 563 477 - Ser GCT [ENA] ¡û
Identical group No.72031 (1 seq.)
>ENV09000419 ABSN01066418 Freshwater sediment metagenome lwFormaldehyde_C1 712 801 + Ser GCT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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