tRNA genes clustered and arranged according to each identical group

Freshwater sediment metagenome lwFormate_C1

Anticodon = CTC

HIT: 2 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.378480 (4 seq.)
>WENV183724245 PJQE01003036 [PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane 3175 3248 + Glu CTC [ENA] ¢þ
>WENV183725178 PJQE01184910 [PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane 76 3 - Glu CTC [ENA] ¢þ
>WENV170653728 JRYJ01060194 [JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated 465 541 + Glu CTC [ENA] ¢þ
>ENV09000527 ABSO01013645 Freshwater sediment metagenome lwFormate_C1 12 85 + Glu CTC [ENA] ¡û
Identical group No.492412 (19 seq.)
>WENV180019862 FTCS01000228 [FTCS] metagenome; soil 2451 2524 + Glu CTC [ENA] ¢þ
>WENV180038730 LLBY010004066 [LLBY] soil metagenome; soil from tomato rhizosphere 1900 1828 - Glu CTC [ENA] ¢þ
>WENV180039405 LLBY010064603 [LLBY] soil metagenome; soil from tomato rhizosphere 1669 1597 - Glu CTC [ENA] ¢þ
>WENV180039442 LLBY010070898 [LLBY] soil metagenome; soil from tomato rhizosphere 8 80 + Glu CTC [ENA] ¢þ
>WENV180041387 LLBZ010116117 [LLBZ] soil metagenome; soil from tomato rhizosphere 7 79 + Glu CTC [ENA] ¢þ
>WENV180690411 OCZS010005605 [OCZS] soil metagenome; soil 3881 3953 + Glu CTC [ENA] ¢þ
>WENV181184749 OEKP01000808 [OEKP] metagenome; 1998 6840 6768 - Glu CTC [ENA] ¢þ
>WENV183661435 ORJL010108687 [ORJL] groundwater metagenome; groundwater 1197 1270 + Glu CTC [ENA] ¢þ
>WENV183669509 ORJL010848970 [ORJL] groundwater metagenome; groundwater 11318 11246 - Glu CTC [ENA] ¢þ
>WENV183671991 ORJL011124370 [ORJL] groundwater metagenome; groundwater 1563 1491 - Glu CTC [ENA] ¢þ
>WENV183675739 ORJL011544321 [ORJL] groundwater metagenome; groundwater 75 3 - Glu CTC [ENA] ¢þ
>WENV183677775 ORJL011798409 [ORJL] groundwater metagenome; groundwater 74 2 - Glu CTC [ENA] ¢þ
>WENV183679732 ORMF010099237 [ORMF] groundwater metagenome; groundwater 216 144 - Glu CTC [ENA] ¢þ
>WENV183680199 ORMF010149588 [ORMF] groundwater metagenome; groundwater 363 290 - Glu CTC [ENA] ¢þ
>WENV183690486 ORMF011606868 [ORMF] groundwater metagenome; groundwater 1963 2035 + Glu CTC [ENA] ¢þ
>WENV183724773 PJQE01064866 [PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane 108 181 + Glu CTC [ENA] ¢þ
>WENV170566371 FKKE01020588 [FKKE] freshwater metagenome; freshwater 1519 1446 - Glu CTC [ENA] ¢þ
>W1810784108 QQZY01000002 Actinomycetota Gaiella occulta F2-233 [QQZY] 118115 118041 - Glu CTC [ENA] ¡û
>ENV09000524 ABSO01013385 Freshwater sediment metagenome lwFormate_C1 212 284 + Glu CTC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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