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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Freshwater sediment metagenome lwMethenol_C1
Anticodon = TAG
HIT:
7 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.94118 (3 seq.)
>W1711409330
MGOD01000039
Chloroflexota
Chloroflexi bacterium RBG_16_70_13 [MGOD]
23364
23277
-
Leu
TAG
[ENA]
¡û
>WENV180355957
OBNJ01010810
[OBNJ] sediment metagenome; sediment
246
333
+
Leu
TAG
[ENA]
¢þ
>ENV09001165
ABSQ01042369
Freshwater sediment metagenome lwMethenol_C1
519
606
+
Leu
TAG
[ENA]
¡û
Identical group No.112730 (292 seq.)
>W1710807300
LKCX01000011
Betaproteobacteria
Curvibacter sp. PAE-UM [LKCX]
48880
48966
+
Leu
TAG
[ENA]
¡û
>W1710822428
LKUW01000049
Betaproteobacteria
Paracidovorax citrulli [LKUW]
185302
185388
+
Leu
TAG
[ENA]
¡û
>W1710861012
LMDI01000015
Betaproteobacteria
Rhizobacter sp. Root1221 [LMDI]
74664
74750
+
Leu
TAG
[ENA]
¡û
>W1710861472
LMDQ01000014
Betaproteobacteria
Acidovorax sp. Root402 [LMDQ]
1038201
1038115
-
Leu
TAG
[ENA]
¡û
>W1710865363
LMGP01000017
Betaproteobacteria
Acidovorax sp. Root568 [LMGP]
222551
222637
+
Leu
TAG
[ENA]
¡û
>W1710866638
LMHQ01000003
Betaproteobacteria
Acidovorax sp. Root70 [LMHQ]
31666
31752
+
Leu
TAG
[ENA]
¡û
>W1710867343
LMIE01000031
Betaproteobacteria
Hydrogenophaga sp. Root209 [LMIE]
74748
74662
-
Leu
TAG
[ENA]
¡û
>W1710868492
LMJC01000031
Betaproteobacteria
Acidovorax sp. Root267 [LMJC]
204549
204635
+
Leu
TAG
[ENA]
¡û
>W1710868692
LMJH01000001
Betaproteobacteria
Acidovorax sp. Root275 [LMJH]
339807
339893
+
Leu
TAG
[ENA]
¡û
>W1710872391
LMLY01000025
Betaproteobacteria
Acidovorax sp. Leaf76 [LMLY]
164802
164716
-
Leu
TAG
[ENA]
¡û
>W1710872448
LMLZ01000021
Betaproteobacteria
Acidovorax sp. Leaf78 [LMLZ]
164325
164239
-
Leu
TAG
[ENA]
¡û
>W1710872611
LMMC01000024
Betaproteobacteria
Acidovorax sp. Leaf84 [LMMC]
249837
249751
-
Leu
TAG
[ENA]
¡û
>W1710873399
LMMT01000003
Betaproteobacteria
Pseudorhodoferax sp. Leaf265 [LMMT]
188097
188183
+
Leu
TAG
[ENA]
¡û
>W1710873485
LMMV01000001
Betaproteobacteria
Pseudorhodoferax sp. Leaf267 [LMMV]
356799
356885
+
Leu
TAG
[ENA]
¡û
>W1710873721
LMNA01000001
Betaproteobacteria
Pseudorhodoferax sp. Leaf274 [LMNA]
293691
293605
-
Leu
TAG
[ENA]
¡û
>W1710875986
LMOV01000024
Betaproteobacteria
Acidovorax sp. Leaf160 [LMOV]
359206
359120
-
Leu
TAG
[ENA]
¡û
>W1710877024
LMPT01000019
Betaproteobacteria
Acidovorax sp. Leaf191 [LMPT]
597240
597154
-
Leu
TAG
[ENA]
¡û
>W1710892953
LNEG01000215
Betaproteobacteria
Burkholderiales bacterium Ga0074133 [LNEG]
9461
9547
+
Leu
TAG
[ENA]
¡û
>W1711073555
LSIQ01000609
Betaproteobacteria
Comamonadaceae bacterium CCH12-A10 [LSIQ]
8434
8520
+
Leu
TAG
[ENA]
¡û
>W1711073662
LSIU01000457
Betaproteobacteria
Comamonadaceae bacterium CCH4-C5 [LSIU]
4843
4929
+
Leu
TAG
[ENA]
¡û
>W1711125009
LUKZ01000019
Betaproteobacteria
Acidovorax sp. GW101-3H11 [LUKZ]
51267
51353
+
Leu
TAG
[ENA]
¡û
>W1711172982
LWCN01000004
Betaproteobacteria
Delftia sp. GW456-R20 [LWCN]
1425095
1425009
-
Leu
TAG
[ENA]
¡û
>W1711343205
MCIC01000014
Betaproteobacteria
Hydrogenophaga sp. H7 [MCIC]
85193
85279
+
Leu
TAG
[ENA]
¡û
>W1711384817
MEDK01000067
Betaproteobacteria
Acidovorax sp. SCN 65-108 [MEDK]
89
3
-
Leu
TAG
[ENA]
¡û
>W1711384842
MEDL01000042
Betaproteobacteria
Acidovorax sp. SCN 68-22 [MEDL]
11802
11716
-
Leu
TAG
[ENA]
¡û
>W1711384877
MEDM01000080
Betaproteobacteria
Acidovorax sp. SCN 65-28 [MEDM]
30434
30520
+
Leu
TAG
[ENA]
¡û
>W1711385288
MEEA01000052
Betaproteobacteria
Hydrogenophaga sp. SCN 70-13 [MEEA]
6829
6915
+
Leu
TAG
[ENA]
¡û
>W1711394766
MERR01000014
Betaproteobacteria
Burkholderiales bacterium GWA2_64_37 [MERR]
223824
223910
+
Leu
TAG
[ENA]
¡û
>W1711394807
MERS01000004
Betaproteobacteria
Burkholderiales bacterium GWE1_65_30 [MERS]
121707
121621
-
Leu
TAG
[ENA]
¡û
>W1711394873
MERT01000028
Betaproteobacteria
Burkholderiales bacterium GWF1_66_17 [MERT]
121704
121618
-
Leu
TAG
[ENA]
¡û
>W1711409739
MGPC01000029
Betaproteobacteria
Curvibacter sp. GWA2_64_110 [MGPC]
84153
84067
-
Leu
TAG
[ENA]
¡û
>W1711453657
MIYM01000003
Betaproteobacteria
Hydrogenophaga sp. PML113 [MIYM]
91659
91745
+
Leu
TAG
[ENA]
¡û
>W1711501333
MKRM01000157
Betaproteobacteria
Acidovorax sp. 65-7 [MKRM]
6101
6015
-
Leu
TAG
[ENA]
¡û
>W1711502461
MKSS01000155
Betaproteobacteria
Hydrogenophaga sp. 70-12 [MKSS]
854
768
-
Leu
TAG
[ENA]
¡û
>W1711503013
MKTF01000065
Betaproteobacteria
Burkholderiales bacterium 64-34 [MKTF]
113471
113385
-
Leu
TAG
[ENA]
¡û
>W1711504302
MKUK01000042
Betaproteobacteria
Alicycliphilus sp. 69-12 [MKUK]
31930
32016
+
Leu
TAG
[ENA]
¡û
>W1711504605
MKUS01000048
Betaproteobacteria
Burkholderiales bacterium 68-12 [MKUS]
52702
52788
+
Leu
TAG
[ENA]
¡û
>W1711504778
MKUX01000021
Betaproteobacteria
Delftia sp. 67-8 [MKUX]
84635
84549
-
Leu
TAG
[ENA]
¡û
>W1711574839
MNGK01000133
Betaproteobacteria
Delftia sp. 13_1_40CM_3_66_6 [MNGK]
13545
13631
+
Leu
TAG
[ENA]
¡û
>W1711575572
MNIU01000037
Betaproteobacteria
Delftia sp. 13_1_20CM_4_67_18 [MNIU]
53985
54071
+
Leu
TAG
[ENA]
¡û
>W1711751397
MUNS01000027
Betaproteobacteria
Polaromonas sp. C04 [MUNS]
57789
57875
+
Leu
TAG
[ENA]
¡û
>W1711751716
MUNZ01000101
Betaproteobacteria
Hydrogenophaga sp. A37 [MUNZ]
88872
88958
+
Leu
TAG
[ENA]
¡û
>W1711853524
MYFL01000001
Betaproteobacteria
Delftia sp. K82 [MYFL]
3434612
3434526
-
Leu
TAG
[ENA]
¡û
>W1712049928
NFUT01000002
Betaproteobacteria
Hydrogenophaga sp. IBVHS2 [NFUT]
528390
528476
+
Leu
TAG
[ENA]
¡û
>W1712049958
NFUU01000001
Betaproteobacteria
Hydrogenophaga sp. IBVHS1 [NFUU]
1418412
1418498
+
Leu
TAG
[ENA]
¡û
>W1712096731
NIAZ01000070
Betaproteobacteria
Acidovorax sp. T1m [NIAZ]
4982
5068
+
Leu
TAG
[ENA]
¡û
>C171035738
CP015118
Betaproteobacteria
Piscinibacter gummiphilus NS21 [CP015118]
2444708
2444794
+
Leu
TAG
-
¡û
>C171049716
CP016447
Betaproteobacteria
Acidovorax sp. RAC01 [CP016447]
70564
70478
-
Leu
TAG
-
¡û
>C171049769
CP016449
Betaproteobacteria
Hydrogenophaga sp. RAC07 [CP016449]
1487993
1488079
+
Leu
TAG
-
¡û
>C171060616
CP017311
Betaproteobacteria
Hydrogenophaga sp. PBC [CP017311]
4349412
4349326
-
Leu
TAG
-
¡û
>C171089884
CP019171
Betaproteobacteria
Delftia acidovorans [CP019171]
2809259
2809345
+
Leu
TAG
-
¡û
>C171091632
CP019236
Betaproteobacteria
Rhodoferax koreense DCY-110 [CP019236]
2125185
2125271
+
Leu
TAG
-
¡û
>C171118041
CP021359
Betaproteobacteria
Acidovorax carolinensis NA2 [CP021359]
1458480
1458566
+
Leu
TAG
-
¡û
>C171118092
CP021361
Betaproteobacteria
Acidovorax carolinensis NA3 [CP021361]
1449318
1449404
+
Leu
TAG
-
¡û
>C171118169
CP021362
Betaproteobacteria
Acidovorax carolinensis P3 [CP021362]
2498904
2498818
-
Leu
TAG
-
¡û
>C171118195
CP021366
Betaproteobacteria
Acidovorax carolinensis P4 [CP021366]
1581802
1581888
+
Leu
TAG
-
¡û
>C171119329
CP021455
Betaproteobacteria
Comamonas serinivorans DSM 26136 [CP021455]
881036
881122
+
Leu
TAG
-
¡û
>C171120942
CP021648
Betaproteobacteria
Acidovorax sp. T1 [CP021648]
2601433
2601347
-
Leu
TAG
-
¡û
>W131002549
AGYX01000036
Betaproteobacteria
Delftia acidovorans CCUG 274B [AGYX]
6519
6433
-
Leu
TAG
[ENA]
¡û
>W131002621
AGYY01000032
Betaproteobacteria
Delftia acidovorans CCUG 15835 [AGYY]
66611
66697
+
Leu
TAG
[ENA]
¡û
>W131043282
AMPI01000023
Bacteroidota
Chryseobacterium taeanense ARB2 [AMPI]
10049
9963
-
Leu
TAG
[ENA]
¡û
>W131045630
AMRP01000026
Betaproteobacteria
Paracidovorax citrulli ZJU1106 [AMRP]
3904
3990
+
Leu
TAG
[ENA]
¡û
>W131066655
ANOY01001704
Betaproteobacteria
Pseudacidovorax intermedius NH-1 [ANOY]
6128
6042
-
Leu
TAG
[ENA]
¡û
>W131104517
APCR01000169
Betaproteobacteria
Comamonas sp. B-9 [APCR]
22434
22348
-
Leu
TAG
[ENA]
¡û
>W131171391
ARGE01000030
Betaproteobacteria
Brachymonas chironomi DSM 19884 [ARGE]
78715
78801
+
Leu
TAG
[ENA]
¡û
>W131178423
ARLO01000069
Betaproteobacteria
Curvibacter lanceolatus ATCC 14669 [ARLO]
250642
250728
+
Leu
TAG
[ENA]
¡û
>W131224257
AUCQ01000023
Betaproteobacteria
Comamonas composti DSM 21721 [AUCQ]
83836
83750
-
Leu
TAG
[ENA]
¡û
>W131227117
AUEX01000010
Betaproteobacteria
Acidovorax sp. JHL-9 [AUEX]
30741
30655
-
Leu
TAG
[ENA]
¡û
>W131229564
AUGX01000003
Betaproteobacteria
Ottowia thiooxydans DSM 14619 [AUGX]
83355
83441
+
Leu
TAG
[ENA]
¡û
>W131239415
BANP01000130
Betaproteobacteria
Acidovorax sp. MR-S7 [BANP]
15037
14951
-
Leu
TAG
[ENA]
¡û
>C000143
CP000512
Betaproteobacteria
Paracidovorax citrulli AAC00-1 [CP000512]
1610851
1610765
-
Leu
TAG
[Ensembl]
¡û
>C000356
CP000539
Betaproteobacteria
Acidovorax sp. JS42 [CP000539]
1281620
1281706
+
Leu
TAG
[Ensembl]
¡û
>C026295
CP000542
Betaproteobacteria
Verminephrobacter eiseniae EF01-2 [CP000542]
4818443
4818529
+
Leu
TAG
[Ensembl]
¡û
>w020822
AAVD01000005
Betaproteobacteria
Delftia acidovorans SPH-1 [AAVD]
404340
404257
-
Leu
TAG
[ENA]
¡û
>WENV180041164
LLBZ010055445
[LLBZ] soil metagenome; soil from tomato rhizosphere
2979
2893
-
Leu
TAG
[ENA]
¢þ
>WENV180111674
OAPN01136920
[OAPN] marine metagenome; 2011
322
236
-
Leu
TAG
[ENA]
¢þ
>WENV180284331
OBID01030240
[OBID] metagenome; sludge
975
889
-
Leu
TAG
[ENA]
¢þ
>WENV180693126
OCZS011020695
[OCZS] soil metagenome; soil
142
228
+
Leu
TAG
[ENA]
¢þ
>WENV181169377
OEIV010001958
[OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
1785
1699
-
Leu
TAG
[ENA]
¢þ
>WENV181169524
OEIV010003590
[OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
4760
4846
+
Leu
TAG
[ENA]
¢þ
>WENV181322581
OFKT01001922
[OFKT] marine metagenome; sea ice
811
725
-
Leu
TAG
[ENA]
¢þ
>WENV181323684
OFKY01035502
[OFKY] marine metagenome; sea ice
281
367
+
Leu
TAG
[ENA]
¢þ
>WENV181369127
OFQO01001674
[OFQO] freshwater metagenome; Freshwater Lake
559
645
+
Leu
TAG
[ENA]
¢þ
>WENV181369614
OFQP01012391
[OFQP] freshwater metagenome; Freshwater Lake
593
507
-
Leu
TAG
[ENA]
¢þ
>WENV181402219
OFTY01000260
[OFTY] sludge metagenome; sludge
32838
32752
-
Leu
TAG
[ENA]
¢þ
>WENV181414949
OGCL01002446
[OGCL] hot springs metagenome; Hot spring water
5606
5692
+
Leu
TAG
[ENA]
¢þ
>WENV181414968
OGCL01002592
[OGCL] hot springs metagenome; Hot spring water
6289
6203
-
Leu
TAG
[ENA]
¢þ
>W141214306
AZSO01000789
Betaproteobacteria
Hydrogenophaga sp. T4 [AZSO]
1172
1086
-
Leu
TAG
[ENA]
¡û
>W141238142
BBJX01000009
Betaproteobacteria
Comamonas granuli NBRC 101663 [BBJX]
113130
113216
+
Leu
TAG
[ENA]
¡û
>C08004013
CP000884
Betaproteobacteria
Delftia acidovorans SPH-1 [CP000884]
2851900
2851986
+
Leu
TAG
[Ensembl]
¡û
>W141260638
CCAE010000076
Betaproteobacteria
Hydrogenophaga intermedia [CCAE]
12067
11981
-
Leu
TAG
[ENA]
¡û
>W141276679
JADZ01000012
Betaproteobacteria
Curvibacter gracilis ATCC BAA-807 [JADZ]
170502
170588
+
Leu
TAG
[ENA]
¡û
>W141278792
JAFU01000004
Betaproteobacteria
Acidovorax sp. JHL-3 [JAFU]
28204
28118
-
Leu
TAG
[ENA]
¡û
>W141319052
JBOK01000015
Betaproteobacteria
Comamonas aquatica DA1877 [JBOK]
6484
6398
-
Leu
TAG
[ENA]
¡û
>WENV183725995
PJQF01055282
[PJQF] biofilm metagenome; biomolecule (vanillin) treated reverse osmosis membrane biofilm
207
293
+
Leu
TAG
[ENA]
¢þ
>WENV183744910
PJUL01000623
[PJUL] feces metagenome; Chicken feces enriched on filter paper
13050
13136
+
Leu
TAG
[ENA]
¢þ
>WENV183745001
PJUL01001259
[PJUL] feces metagenome; Chicken feces enriched on filter paper
100
14
-
Leu
TAG
[ENA]
¢þ
>WENV183745242
PJUL01008444
[PJUL] feces metagenome; Chicken feces enriched on filter paper
563
649
+
Leu
TAG
[ENA]
¢þ
>WENV183750048
PPFU01251351
[PPFU] hypolithon metagenome; Antarctic Hypolithon
155
241
+
Leu
TAG
[ENA]
¢þ
>WENV170011293
APMI01054482
[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
1358
1272
-
Leu
TAG
[ENA]
¢þ
>WENV170012206
APMI01135750
[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
1030
1116
+
Leu
TAG
[ENA]
¢þ
>WENV170378916
CETV01065350
[CETV] marine metagenome genome assembly TARA_133_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
1167
1253
+
Leu
TAG
[ENA]
¢þ
>WENV170554088
CXWK01045891
[CXWK] wastewater metagenome; activated sludge
694
608
-
Leu
TAG
[ENA]
¢þ
>WENV170554238
CXWK01055459
[CXWK] wastewater metagenome; activated sludge
579
493
-
Leu
TAG
[ENA]
¢þ
>WENV170639734
JFJP01006463
[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
2043
2129
+
Leu
TAG
[ENA]
¢þ
>WENV170646166
JQGG01010286
[JQGG] wastewater metagenome; domestic wastewater sediment treated with nitrate and nitrite at 100mg /litre each
380
466
+
Leu
TAG
[ENA]
¢þ
>WENV170650729
JRYE01013984
[JRYE] activated sludge metagenome; activated biomass in a lab-scale reactor treating industrial wastewater at 4 ppm DO
653
567
-
Leu
TAG
[ENA]
¢þ
>WENV170705387
LNAO01000032
[LNAO] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
11201
11115
-
Leu
TAG
[ENA]
¢þ
>WENV170707474
LNAP01022014
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
3758
3844
+
Leu
TAG
[ENA]
¢þ
>WENV170711675
LNFM01006449
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
19412
19326
-
Leu
TAG
[ENA]
¢þ
>WENV170712251
LNFM01011326
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
88
2
-
Leu
TAG
[ENA]
¢þ
>WENV170712305
LNFM01012045
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
4259
4345
+
Leu
TAG
[ENA]
¢þ
>WENV170713067
LNFM01023271
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
7
93
+
Leu
TAG
[ENA]
¢þ
>WENV170714299
LNFM01066142
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
2159
2073
-
Leu
TAG
[ENA]
¢þ
>WENV170975063
MTKY01089715
[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
1354
1440
+
Leu
TAG
[ENA]
¢þ
>W141484642
JFYT01000096
Betaproteobacteria
Delftia sp. RIT313 [JFYT]
13939
13853
-
Leu
TAG
[ENA]
¡û
>C181019012
CP016278
Betaproteobacteria
Diaphorobacter nitroreducens SL-205 [CP016278]
1773200
1773114
-
Leu
TAG
-
¡û
>C181088964
CP023687
Betaproteobacteria
Paracidovorax citrulli KACC17005 [CP023687]
2942218
2942304
+
Leu
TAG
-
¡û
>C181103482
CP024645
Betaproteobacteria
Piscinibacter gummiphilus NBRC 109400 [CP024645]
2444710
2444796
+
Leu
TAG
-
¡û
>C181158443
CP027666
Betaproteobacteria
Ottowia oryzae KADR8-3 [CP027666]
3185676
3185590
-
Leu
TAG
-
¡û
>C181158500
CP027667
Betaproteobacteria
Melaminivora suipulveris SC2-9 [CP027667]
536859
536773
-
Leu
TAG
-
¡û
>C181159964
CP027792
Betaproteobacteria
Pulveribacter suum SC2-7 [CP027792]
1480187
1480273
+
Leu
TAG
-
¡û
>C181176220
CP029210
Betaproteobacteria
Aquabacterium olei NBRC 110486 [CP029210]
2259705
2259619
-
Leu
TAG
-
¡û
>C191063793
CP029373
Betaproteobacteria
Paracidovorax citrulli M6 [CP029373]
3503216
3503130
-
Leu
TAG
-
¡û
>C191073178
CP031013
Betaproteobacteria
Polaromonas sp. SP1 [CP031013]
4233039
4232953
-
Leu
TAG
-
¡û
>C191154118
CP037867
Betaproteobacteria
Hydrogenophaga pseudoflava DSM 1084 [CP037867]
3162268
3162182
-
Leu
TAG
-
¡û
>C191163877
CP039252
Betaproteobacteria
Hydrogenophaga sp. PAMC20947 [CP039252]
656533
656619
+
Leu
TAG
-
¡û
>W09105970
AASD01000040
Betaproteobacteria
Acidovorax sp. JS42 [AASD]
8563
8477
-
Leu
TAG
[ENA]
¡û
>W09106021
AASQ01000001
Betaproteobacteria
Verminephrobacter eiseniae EF01-2 [AASQ]
694949
694863
-
Leu
TAG
[ENA]
¡û
>W09106088
AASX01000015
Betaproteobacteria
Paracidovorax citrulli subsp. citrulli AAC00-1 [AASX]
73056
73142
+
Leu
TAG
[ENA]
¡û
>W09117922
ACCM01000001
Betaproteobacteria
[Acidovorax] ebreus TPSY [ACCM]
205735
205649
-
Leu
TAG
[ENA]
¡û
>W09133911
ACQT01000031
Betaproteobacteria
Acidovorax delafieldii 2AN [ACQT]
22887
22801
-
Leu
TAG
[ENA]
¡û
>W141701634
JMKU01000016
Betaproteobacteria
Paracidovorax oryzae ATCC 19882 [JMKU]
114098
114184
+
Leu
TAG
[ENA]
¡û
>W141754989
JNWH01000044
Betaproteobacteria
Delftia tsuruhatensis [JNWH]
20486
20400
-
Leu
TAG
[ENA]
¡û
>W141755066
JNWI01000050
Betaproteobacteria
Delftia sp. 670 [JNWI]
34174
34260
+
Leu
TAG
[ENA]
¡û
>W141789900
JOUB01000005
Betaproteobacteria
Delftia acidovorans [JOUB]
2002702
2002788
+
Leu
TAG
[ENA]
¡û
>W141816786
JQKD01000005
Betaproteobacteria
Xenophilus azovorans DSM 13620 [JQKD]
101290
101376
+
Leu
TAG
[ENA]
¡û
>W1910179203
BJHU01000035
Betaproteobacteria
Acidovorax sp. NB1 [BJHU]
376878
376792
-
Leu
TAG
[ENA]
¡û
>C09104042
CP001392
Betaproteobacteria
[Acidovorax] ebreus TPSY [CP001392]
1183588
1183674
+
Leu
TAG
[Ensembl]
¡û
>W1910699711
MERU01000004
Betaproteobacteria
Burkholderiales bacterium RIFCSPHIGHO2_01_FULL_63_240 [MERU]
20441
20355
-
Leu
TAG
[ENA]
¡û
>W1910699750
MERV01000012
Betaproteobacteria
Burkholderiales bacterium RIFCSPHIGHO2_01_FULL_64_960 [MERV]
82587
82501
-
Leu
TAG
[ENA]
¡û
>W1910699781
MERW01000002
Betaproteobacteria
Burkholderiales bacterium RIFCSPHIGHO2_02_FULL_64_19 [MERW]
34852
34766
-
Leu
TAG
[ENA]
¡û
>W1910699931
MESA01000034
Betaproteobacteria
Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_63_20 [MESA]
22058
22144
+
Leu
TAG
[ENA]
¡û
>W1910699951
MESB01000054
Betaproteobacteria
Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_65_48 [MESB]
2199
2285
+
Leu
TAG
[ENA]
¡û
>W1910700023
MESC01000449
Betaproteobacteria
Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_67_38 [MESC]
12745
12659
-
Leu
TAG
[ENA]
¡û
>W1910700135
MESF01000186
Betaproteobacteria
Burkholderiales bacterium RIFCSPLOWO2_02_FULL_66_35 [MESF]
32993
33079
+
Leu
TAG
[ENA]
¡û
>W1910700149
MESG01000046
Betaproteobacteria
Burkholderiales bacterium RIFCSPLOWO2_02_FULL_67_64 [MESG]
7780
7866
+
Leu
TAG
[ENA]
¡û
>W1910700185
MESH01000157
Betaproteobacteria
Burkholderiales bacterium RIFCSPLOWO2_12_67_14 [MESH]
48574
48488
-
Leu
TAG
[ENA]
¡û
>W1910700283
MESJ01000038
Betaproteobacteria
Burkholderiales bacterium RIFCSPLOWO2_12_FULL_64_33 [MESJ]
68503
68417
-
Leu
TAG
[ENA]
¡û
>W1910700302
MESK01000001
Betaproteobacteria
Burkholderiales bacterium RIFCSPLOWO2_12_FULL_64_99 [MESK]
20702
20788
+
Leu
TAG
[ENA]
¡û
>W1910700385
MESL01000051
Betaproteobacteria
Burkholderiales bacterium RIFCSPLOWO2_12_FULL_65_40 [MESL]
14711
14797
+
Leu
TAG
[ENA]
¡û
>W1910700403
MESM01000181
Betaproteobacteria
Burkholderiales bacterium RIFCSPLOWO2_12_FULL_67_210 [MESM]
2216
2130
-
Leu
TAG
[ENA]
¡û
>W1910803609
MTBE01000031
Betaproteobacteria
Diaphorobacter sp. LR2014-1 [MTBE]
41360
41446
+
Leu
TAG
[ENA]
¡û
>W1910972110
NKDB02000004
Betaproteobacteria
Alicycliphilus denitrificans BQ1 [NKDB]
320700
320614
-
Leu
TAG
[ENA]
¡û
>W1911114309
NOIG01000004
Betaproteobacteria
Acidovorax kalamii KNDSW-TSA6 [NOIG]
688209
688295
+
Leu
TAG
[ENA]
¡û
>W1911390927
NWBQ01000053
Betaproteobacteria
Macromonas bipunctata DSM 12705 [NWBQ]
45152
45238
+
Leu
TAG
[ENA]
¡û
>W1911398054
NWMV01000031
Betaproteobacteria
Macromonas nakdongensis BK-30 [NWMV]
5237
5323
+
Leu
TAG
[ENA]
¡û
>W1911497679
OCRO01000001
Betaproteobacteria
Delftia acidovorans ATCC 11299b [OCRO]
3507269
3507183
-
Leu
TAG
[ENA]
¡û
>W1911647691
QAJR01000015
Betaproteobacteria
Acidovorax sp. FJL06 [QAJR]
42944
43030
+
Leu
TAG
[ENA]
¡û
>W1911768531
QXGR01000005
Betaproteobacteria
Simplicispira lacusdiani CPCC 100842 [QXGR]
291063
290977
-
Leu
TAG
[ENA]
¡û
>W1911775032
QXMG01000056
Betaproteobacteria
Caldimonas tepidiphila YIM 730274 [QXMG]
9926
9840
-
Leu
TAG
[ENA]
¡û
>W1810071497
PEET01000001
Betaproteobacteria
Acidovorax sp. 59 [PEET]
2833583
2833497
-
Leu
TAG
[ENA]
¡û
>W1810071633
PEEV01000001
Betaproteobacteria
Acidovorax sp. 56 [PEEV]
1484053
1483967
-
Leu
TAG
[ENA]
¡û
>W1810071683
PEEW01000001
Betaproteobacteria
Burkholderiales bacterium 23 [PEEW]
4385337
4385251
-
Leu
TAG
[ENA]
¡û
>SRA1002148
SRR001308.273944
Metagenomic characterization of a wastewater treatment plant (SRP000180)
191
276
+
Leu
TAG
[SRA]
>W1810072097
PEFD01000001
Betaproteobacteria
Delftia sp. 60 [PEFD]
2746120
2746206
+
Leu
TAG
[ENA]
¡û
>W1810072498
PEFJ01000001
Betaproteobacteria
Acidovorax sp. 62 [PEFJ]
2202352
2202266
-
Leu
TAG
[ENA]
¡û
>W1810088935
PGEI01000005
Betaproteobacteria
Comamonadaceae bacterium CD01 [PGEI]
37244
37330
+
Leu
TAG
[ENA]
¡û
>W1810088998
PGEJ01000017
Betaproteobacteria
Alicycliphilus denitrificans CD02 [PGEJ]
41050
41136
+
Leu
TAG
[ENA]
¡û
>W1810173327
PJMZ01000001
Betaproteobacteria
Acidovorax sp. 30 [PJMZ]
2120256
2120342
+
Leu
TAG
[ENA]
¡û
>W1810474414
QAIH01000034
Betaproteobacteria
Acidovorax sp. HMWF029 [QAIH]
11406
11320
-
Leu
TAG
[ENA]
¡û
>W1810474706
QAIM01000595
Betaproteobacteria
Acidovorax sp. HMWF018 [QAIM]
26082
25996
-
Leu
TAG
[ENA]
¡û
>W1810486311
QAXU01000009
Betaproteobacteria
Acidovorax sp. CF301 [QAXU]
174001
174087
+
Leu
TAG
[ENA]
¡û
>W1810513795
QBTZ01000001
Betaproteobacteria
Acidovorax sp. 107 [QBTZ]
998907
998993
+
Leu
TAG
[ENA]
¡û
>W1810573152
QEKN01000001
Betaproteobacteria
Paracidovorax citrulli AAC00-1 #5684 [QEKN]
3944120
3944034
-
Leu
TAG
[ENA]
¡û
>W1810573546
QEKU01000001
Betaproteobacteria
Acidovorax sp. 99 [QEKU]
396176
396090
-
Leu
TAG
[ENA]
¡û
>W1810577594
QEOJ01000001
Betaproteobacteria
Rhodoferax sp. YR267 [QEOJ]
261147
261061
-
Leu
TAG
[ENA]
¡û
>W1810580607
QETI01000002
Betaproteobacteria
Comamonas sp. JNW [QETI]
489951
490037
+
Leu
TAG
[ENA]
¡û
>W1810609654
QGUB01000011
Betaproteobacteria
Melaminivora alkalimesophila DSM 26006 [QGUB]
7833
7747
-
Leu
TAG
[ENA]
¡û
>W1810672019
QJTC01000006
Betaproteobacteria
Xylophilus ampelinus CECT 7646 [QJTC]
15338
15424
+
Leu
TAG
[ENA]
¡û
>W1810677469
QKMS01000018
Betaproteobacteria
Acidovorax sp. OV235 [QKMS]
109657
109571
-
Leu
TAG
[ENA]
¡û
>W1810683050
QKVP01000005
Betaproteobacteria
Acidovorax sp. ST3 [QKVP]
220100
220186
+
Leu
TAG
[ENA]
¡û
>W1810696128
QLTA01000006
Betaproteobacteria
Paracidovorax anthurii CFPB 3232 [QLTA]
61714
61628
-
Leu
TAG
[ENA]
¡û
>W1810697080
QLTU01000013
Betaproteobacteria
Acidovorax defluvii DSM 12644 [QLTU]
97660
97574
-
Leu
TAG
[ENA]
¡û
>W1810759451
QPJK01000014
Betaproteobacteria
Pseudorhodoferax soli DSM 21634 [QPJK]
154260
154346
+
Leu
TAG
[ENA]
¡û
>W1810759921
QPJU01000001
Betaproteobacteria
Extensimonas vulgaris DSM 100911 [QPJU]
59405
59319
-
Leu
TAG
[ENA]
¡û
>W1810763103
QQAV01000004
Betaproteobacteria
Pseudacidovorax intermedius DSM 21352 [QQAV]
79312
79226
-
Leu
TAG
[ENA]
¡û
>W1810885125
QUNC01000001
Betaproteobacteria
Paracidovorax citrulli AAC00-1 #5596 [QUNC]
2939852
2939938
+
Leu
TAG
[ENA]
¡û
>W1810912322
QVLS01000001
Betaproteobacteria
Hydrogenophaga borbori LA-38 [QVLS]
366207
366293
+
Leu
TAG
[ENA]
¡û
>C151081663
CP011371
Betaproteobacteria
Caldimonas brevitalea DSM 7029 [CP011371]
2085134
2085220
+
Leu
TAG
[Ensembl]
¡û
>ENV09000908
ABSP01059218
Freshwater sediment metagenome lwMethane_C1
342
428
+
Leu
TAG
[ENA]
¡û
>ENV09001191
ABSQ01045712
Freshwater sediment metagenome lwMethenol_C1
816
730
-
Leu
TAG
[ENA]
¡û
>W1510016592
BBSJ01000052
Betaproteobacteria
Alicycliphilus sp. B1 [BBSJ]
454248
454162
-
Leu
TAG
[ENA]
¡û
>W10110534
ADCB01000002
Betaproteobacteria
Paracidovorax avenae subsp. avenae ATCC 19860 [ADCB]
27503
27417
-
Leu
TAG
[ENA]
¡û
>W10119598
ADWA01000010
Betaproteobacteria
Alicycliphilus denitrificans BC [ADWA]
63711
63625
-
Leu
TAG
[ENA]
¡û
>C11100171
CP002521
Betaproteobacteria
Paracidovorax avenae ATCC 19860 [CP002521]
1667142
1667056
-
Leu
TAG
[Ensembl]
¡û
>C11100626
CP002657
Betaproteobacteria
Alicycliphilus denitrificans K601 [CP002657]
1546785
1546871
+
Leu
TAG
[Ensembl]
¡û
>C11107006
CP002735
Betaproteobacteria
Delftia sp. Cs1-4 [CP002735]
4599796
4599710
-
Leu
TAG
[Ensembl]
¡û
>W11112971
ADCB01000002
Betaproteobacteria
Paracidovorax avenae subsp. avenae ATCC 19860 [ADCB]
27503
27417
-
Leu
TAG
[ENA]
¡û
>W1510742435
CYIG01000037
Betaproteobacteria
Paenacidovorax caeni R-24608 [CYIG]
8652
8566
-
Leu
TAG
[ENA]
¡û
>W1510766080
JANU01000016
Betaproteobacteria
Caenimonas sp. SL110 [JANU]
159961
159875
-
Leu
TAG
[ENA]
¡û
>W1511220555
JNCQ01000016
Betaproteobacteria
Delftia lacustris LZ-C [JNCQ]
65910
65996
+
Leu
TAG
[ENA]
¡û
>W1511348532
JRKM01000001
Betaproteobacteria
Aquabacterium sp. NJ1 [JRKM]
689132
689046
-
Leu
TAG
[ENA]
¡û
>W1511390773
JSYI01000123
Betaproteobacteria
Diaphorobacter sp. J5-51 [JSYI]
14084
14170
+
Leu
TAG
[ENA]
¡û
>W1511403294
JTKZ01000779
Betaproteobacteria
Delftia sp. ZNC0008 [JTKZ]
139
53
-
Leu
TAG
[ENA]
¡û
>W11125864
ADWA01000010
Betaproteobacteria
Alicycliphilus denitrificans BC [ADWA]
63711
63625
-
Leu
TAG
[ENA]
¡û
>W1511503072
JXDJ01000024
Betaproteobacteria
Paracidovorax citrulli tw6 [JXDJ]
255960
256046
+
Leu
TAG
[ENA]
¡û
>W1511516994
JXWN01000099
Betaproteobacteria
Comamonas aquatica CJG [JXWN]
39012
38926
-
Leu
TAG
[ENA]
¡û
>W1511518954
JXYQ01000082
Betaproteobacteria
Acidovorax temperans KY4 [JXYQ]
25233
25319
+
Leu
TAG
[ENA]
¡û
>W1511527450
JYHM01000024
Betaproteobacteria
Paracidovorax citrulli pslbtw65 [JYHM]
446697
446611
-
Leu
TAG
[ENA]
¡û
>W1511552103
JZUE01000005
Betaproteobacteria
Aquincola tertiaricarbonis MIMtkpLc11 [JZUE]
6230
6144
-
Leu
TAG
[ENA]
¡û
>W1511583334
LATT01000619
Betaproteobacteria
Delftia tsuruhatensis CM13 [LATT]
3825
3739
-
Leu
TAG
[ENA]
¡û
>W1511596003
LBNQ01000014
Betaproteobacteria
Lampropedia cohaerens CT6 [LBNQ]
17904
17818
-
Leu
TAG
[ENA]
¡û
>W1511625807
LCZH01000022
Betaproteobacteria
Delftia tsuruhatensis MTQ3 [LCZH]
76955
77041
+
Leu
TAG
[ENA]
¡û
>W11156536
AFBG01000018
Betaproteobacteria
Acidovorax radicis N35 [AFBG]
333596
333682
+
Leu
TAG
[ENA]
¡û
>W11156582
AFBH01000012
Betaproteobacteria
Acidovorax radicis N35v [AFBH]
333563
333649
+
Leu
TAG
[ENA]
¡û
>W11170759
AFPT01000066
Betaproteobacteria
Paracidovorax oryzae subsp. avenae RS-1 [AFPT]
30715
30629
-
Leu
TAG
[ENA]
¡û
>C161002858
CP016603
Betaproteobacteria
Comamonas aquatica CJG [CP016603]
2766807
2766721
-
Leu
TAG
-
¡û
>C161029952
CP010951
Betaproteobacteria
Ramlibacter tataouinensis 5-10 [CP010951]
310664
310578
-
Leu
TAG
[Ensembl]
¡û
>W121019090
AGTS01000101
Betaproteobacteria
Acidovorax sp. NO-1 [AGTS]
112926
112840
-
Leu
TAG
[ENA]
¡û
>W121070110
AJWL01000027
Betaproteobacteria
Hydrogenophaga sp. PBC [AJWL]
11857
11771
-
Leu
TAG
[ENA]
¡û
>W121084921
AKIV01000076
Betaproteobacteria
Polaromonas sp. CF318 [AKIV]
48268
48354
+
Leu
TAG
[ENA]
¡û
>W121086442
AKJX01000221
Betaproteobacteria
Acidovorax sp. CF316 [AKJX]
32874
32788
-
Leu
TAG
[ENA]
¡û
>W121108900
ALEE01000154
Betaproteobacteria
Melaminivora alkalimesophila CRZ1 [ALEE]
6514
6428
-
Leu
TAG
[ENA]
¡û
>WENV061472
AACY023433120
Marine microbial communities from Global Ocean Sampling (GOS)
472
560
+
Leu
TAG
[ENA]
>W1610042809
BAZJ01000013
Betaproteobacteria
Diaphorobacter nitroreducens JCM 11421 [BAZJ]
238
324
+
Leu
TAG
[ENA]
¡û
>W1610070382
BCTF01000013
Betaproteobacteria
Hydrogenophaga flava NBRC 102514 [BCTF]
108451
108537
+
Leu
TAG
[ENA]
¡û
>W1610070550
BCTI01000066
Betaproteobacteria
Hydrogenophaga intermedia NBRC 102510 [BCTI]
8912
8998
+
Leu
TAG
[ENA]
¡û
>W1610070563
BCTJ01000004
Betaproteobacteria
Hydrogenophaga palleronii NBRC 102513 [BCTJ]
7418
7504
+
Leu
TAG
[ENA]
¡û
>W1610070853
BCTO01000051
Betaproteobacteria
Delftia tsuruhatensis NBRC 16741 [BCTO]
63452
63538
+
Leu
TAG
[ENA]
¡û
>W1610074358
BCWP01000022
Betaproteobacteria
Curvibacter delicatus NBRC 14919 [BCWP]
67392
67478
+
Leu
TAG
[ENA]
¡û
>W1610074386
BCWQ01000002
Betaproteobacteria
Hydrogenophaga pseudoflava NBRC 102511 [BCWQ]
277595
277509
-
Leu
TAG
[ENA]
¡û
>W1610074453
BCWR01000022
Betaproteobacteria
Hydrogenophaga taeniospiralis NBRC 102512 [BCWR]
55594
55508
-
Leu
TAG
[ENA]
¡û
>W1610076190
BCYO01000003
Betaproteobacteria
Polaromonas jejuensis NBRC 106434 [BCYO]
234621
234707
+
Leu
TAG
[ENA]
¡û
>W1610077649
BCZP01000036
Betaproteobacteria
Delftia acidovorans NBRC 14950 [BCZP]
29005
29091
+
Leu
TAG
[ENA]
¡û
>C131008680
CP003872
Betaproteobacteria
Acidovorax sp. KKS102 [CP003872]
3503411
3503325
-
Leu
TAG
[Ensembl]
¡û
>W1610591943
LDSL01000061
Betaproteobacteria
Pseudacidovorax intermedius [LDSL]
61991
62077
+
Leu
TAG
[ENA]
¡û
>W1610599232
LFJT01000096
Betaproteobacteria
Delftia sp. JD2 [LFJT]
148
62
-
Leu
TAG
[ENA]
¡û
>W1610604916
LFRI01000516
Betaproteobacteria
Aquabacterium parvum [LFRI]
18582
18496
-
Leu
TAG
[ENA]
¡û
>W1610671404
LKCX01000011
Betaproteobacteria
Curvibacter sp. PAE-UM [LKCX]
48880
48966
+
Leu
TAG
[ENA]
¡û
>W1610686293
LKUW01000049
Betaproteobacteria
Paracidovorax citrulli [LKUW]
185302
185388
+
Leu
TAG
[ENA]
¡û
>W1610723358
LMDI01000015
Betaproteobacteria
Rhizobacter sp. Root1221 [LMDI]
74664
74750
+
Leu
TAG
[ENA]
¡û
>W1610723818
LMDQ01000014
Betaproteobacteria
Acidovorax sp. Root402 [LMDQ]
1038201
1038115
-
Leu
TAG
[ENA]
¡û
>W1610727709
LMGP01000017
Betaproteobacteria
Acidovorax sp. Root568 [LMGP]
222551
222637
+
Leu
TAG
[ENA]
¡û
>W1610728984
LMHQ01000003
Betaproteobacteria
Acidovorax sp. Root70 [LMHQ]
31666
31752
+
Leu
TAG
[ENA]
¡û
>W1610729689
LMIE01000031
Betaproteobacteria
Hydrogenophaga sp. Root209 [LMIE]
74748
74662
-
Leu
TAG
[ENA]
¡û
>W1610730838
LMJC01000031
Betaproteobacteria
Acidovorax sp. Root267 [LMJC]
204549
204635
+
Leu
TAG
[ENA]
¡û
>W1610731038
LMJH01000001
Betaproteobacteria
Acidovorax sp. Root275 [LMJH]
339807
339893
+
Leu
TAG
[ENA]
¡û
>W1610734737
LMLY01000025
Betaproteobacteria
Acidovorax sp. Leaf76 [LMLY]
164802
164716
-
Leu
TAG
[ENA]
¡û
>W1610734794
LMLZ01000021
Betaproteobacteria
Acidovorax sp. Leaf78 [LMLZ]
164325
164239
-
Leu
TAG
[ENA]
¡û
>W1610734957
LMMC01000024
Betaproteobacteria
Acidovorax sp. Leaf84 [LMMC]
249837
249751
-
Leu
TAG
[ENA]
¡û
>W1610735745
LMMT01000003
Betaproteobacteria
Pseudorhodoferax sp. Leaf265 [LMMT]
188097
188183
+
Leu
TAG
[ENA]
¡û
>W1610735831
LMMV01000001
Betaproteobacteria
Pseudorhodoferax sp. Leaf267 [LMMV]
356799
356885
+
Leu
TAG
[ENA]
¡û
>W1610736067
LMNA01000001
Betaproteobacteria
Pseudorhodoferax sp. Leaf274 [LMNA]
293691
293605
-
Leu
TAG
[ENA]
¡û
>W1610738332
LMOV01000024
Betaproteobacteria
Acidovorax sp. Leaf160 [LMOV]
359206
359120
-
Leu
TAG
[ENA]
¡û
>W1610739370
LMPT01000019
Betaproteobacteria
Acidovorax sp. Leaf191 [LMPT]
597240
597154
-
Leu
TAG
[ENA]
¡û
>W1610753219
LNEG01000215
Betaproteobacteria
Burkholderiales bacterium Ga0074133 [LNEG]
9461
9547
+
Leu
TAG
[ENA]
¡û
>W1610912860
LSIQ01000609
Betaproteobacteria
Comamonadaceae bacterium CCH12-A10 [LSIQ]
8434
8520
+
Leu
TAG
[ENA]
¡û
>W1610912967
LSIU01000457
Betaproteobacteria
Comamonadaceae bacterium CCH4-C5 [LSIU]
4843
4929
+
Leu
TAG
[ENA]
¡û
>W1610935942
LUKZ01000019
Betaproteobacteria
Acidovorax sp. GW101-3H11 [LUKZ]
51267
51353
+
Leu
TAG
[ENA]
¡û
>W1610981587
LWCN01000004
Betaproteobacteria
Delftia sp. GW456-R20 [LWCN]
1425095
1425009
-
Leu
TAG
[ENA]
¡û
>WENV080228
AATO01014400
Wastewater EBPR microbial communities from Bioreactor (USA sludge)
410
496
+
Leu
TAG
[ENA]
>W1710039969
BAZJ01000013
Betaproteobacteria
Diaphorobacter nitroreducens JCM 11421 [BAZJ]
238
324
+
Leu
TAG
[ENA]
¡û
>W1710067755
BCTF01000013
Betaproteobacteria
Hydrogenophaga flava NBRC 102514 [BCTF]
108451
108537
+
Leu
TAG
[ENA]
¡û
>W1710067923
BCTI01000066
Betaproteobacteria
Hydrogenophaga intermedia NBRC 102510 [BCTI]
8912
8998
+
Leu
TAG
[ENA]
¡û
>W1710067936
BCTJ01000004
Betaproteobacteria
Hydrogenophaga palleronii NBRC 102513 [BCTJ]
7418
7504
+
Leu
TAG
[ENA]
¡û
>W1710068175
BCTO01000051
Betaproteobacteria
Delftia tsuruhatensis NBRC 16741 [BCTO]
63452
63538
+
Leu
TAG
[ENA]
¡û
>W1710071476
BCWP01000022
Betaproteobacteria
Curvibacter delicatus NBRC 14919 [BCWP]
67392
67478
+
Leu
TAG
[ENA]
¡û
>W1710071504
BCWQ01000002
Betaproteobacteria
Hydrogenophaga pseudoflava NBRC 102511 [BCWQ]
277595
277509
-
Leu
TAG
[ENA]
¡û
>W1710071571
BCWR01000022
Betaproteobacteria
Hydrogenophaga taeniospiralis NBRC 102512 [BCWR]
55594
55508
-
Leu
TAG
[ENA]
¡û
>W1710074005
BCYO01000003
Betaproteobacteria
Polaromonas jejuensis NBRC 106434 [BCYO]
234621
234707
+
Leu
TAG
[ENA]
¡û
>W1710075287
BCZP01000036
Betaproteobacteria
Delftia acidovorans NBRC 14950 [BCZP]
29005
29091
+
Leu
TAG
[ENA]
¡û
>W1710512049
FMZC01000002
Betaproteobacteria
Paracidovorax valerianellae [FMZC]
228462
228376
-
Leu
TAG
[ENA]
¡û
>W1710519709
FNEY01000005
Betaproteobacteria
Paracidovorax citrulli [FNEY]
180858
180944
+
Leu
TAG
[ENA]
¡û
>W1710523392
FNHX01000002
Betaproteobacteria
Polaromonas sp. JS666 [FNHX]
241242
241156
-
Leu
TAG
[ENA]
¡û
>W1710524797
FNJA01000001
Betaproteobacteria
Rhodoferax sp. OV413 OV413 [FNJA]
1040506
1040420
-
Leu
TAG
[ENA]
¡û
>W1710525322
FNJL01000032
Betaproteobacteria
Paracidovorax cattleyae [FNJL]
19943
19857
-
Leu
TAG
[ENA]
¡û
>W1710530916
FNPE01000036
Betaproteobacteria
Delftia lacustris [FNPE]
55346
55432
+
Leu
TAG
[ENA]
¡û
>W1710532512
FNQJ01000007
Betaproteobacteria
Acidovorax soli [FNQJ]
49198
49284
+
Leu
TAG
[ENA]
¡û
>W1710547367
FOCW01000001
Betaproteobacteria
Brachymonas denitrificans DSM 15123 [FOCW]
1218536
1218622
+
Leu
TAG
[ENA]
¡û
>W1710551522
FOGD01000002
Betaproteobacteria
Giesbergeria anulus [FOGD]
105179
105265
+
Leu
TAG
[ENA]
¡û
>W1710556899
FOKN01000021
Betaproteobacteria
Delftia tsuruhatensis [FOKN]
63528
63614
+
Leu
TAG
[ENA]
¡û
>W1710557401
FOKZ01000017
Betaproteobacteria
Polaromonas sp. OV174 [FOKZ]
28118
28032
-
Leu
TAG
[ENA]
¡û
>W1710559450
FOMQ01000011
Betaproteobacteria
Paracidovorax konjaci [FOMQ]
135378
135464
+
Leu
TAG
[ENA]
¡û
>W1710561132
FONX01000006
Betaproteobacteria
Paracidovorax wautersii [FONX]
243606
243692
+
Leu
TAG
[ENA]
¡û
>W1710578294
FPBM01000002
Betaproteobacteria
Polaromonas sp. YR568 [FPBM]
650348
650262
-
Leu
TAG
[ENA]
¡û
>W1710578883
FPBX01000036
Betaproteobacteria
Paenacidovorax caeni [FPBX]
8416
8330
-
Leu
TAG
[ENA]
¡û
>W1710583667
FQUZ01000014
Betaproteobacteria
Lampropedia hyalina DSM 16112 [FQUZ]
25274
25360
+
Leu
TAG
[ENA]
¡û
>W1710597068
FTMY01000001
Betaproteobacteria
Pseudacidovorax sp. RU35E [FTMY]
278430
278516
+
Leu
TAG
[ENA]
¡û
>W1710711223
LDSL01000061
Betaproteobacteria
Pseudacidovorax intermedius [LDSL]
61991
62077
+
Leu
TAG
[ENA]
¡û
>W1710720590
LFJT01000096
Betaproteobacteria
Delftia sp. JD2 [LFJT]
148
62
-
Leu
TAG
[ENA]
¡û
>W1710726359
LFRI01000516
Betaproteobacteria
Aquabacterium parvum [LFRI]
18582
18496
-
Leu
TAG
[ENA]
¡û
Identical group No.182008 (11 seq.)
>W131166806
ARCT01000001
Alphaproteobacteria
Methylocystis rosea SV97 [ARCT]
1865734
1865818
+
Leu
TAG
[ENA]
¡û
>W141188908
AYNA01000090
Alphaproteobacteria
Methylocystis sp. SB2 [AYNA]
50881
50797
-
Leu
TAG
[ENA]
¡û
>WENV183660759
ORJL010050639
[ORJL] groundwater metagenome; groundwater
9806
9890
+
Leu
TAG
[ENA]
¢þ
>WENV183694442
ORMF012234043
[ORMF] groundwater metagenome; groundwater
413
497
+
Leu
TAG
[ENA]
¢þ
>C191118882
CP034086
Alphaproteobacteria
Methylocystis rosea GW6 [CP034086]
822234
822318
+
Leu
TAG
-
¡û
>W1911747223
QWDD01000001
Alphaproteobacteria
Methylocystis hirsuta CSC1 [QWDD]
1481557
1481641
+
Leu
TAG
[ENA]
¡û
>W1810397184
PYDU01000003
Alphaproteobacteria
Methylocystis sp. MitZ-2018 [PYDU]
55306
55222
-
Leu
TAG
[ENA]
¡û
>ENV09001102
ABSQ01032488
Freshwater sediment metagenome lwMethenol_C1
145
61
-
Leu
TAG
[ENA]
¡û
>W11150254
AEVM01000026
Alphaproteobacteria
Methylocystis sp. ATCC 49242 [AEVM]
14920
14836
-
Leu
TAG
[ENA]
¡û
>W121067971
AJTV01000005
Alphaproteobacteria
Methylocystis parvus OBBP [AJTV]
44609
44693
+
Leu
TAG
[ENA]
¡û
>C131019923
HE956757
Alphaproteobacteria
Methylocystis sp. SC2 [HE956757]
3299007
3299091
+
Leu
TAG
[Ensembl]
¡û
Identical group No.182498 (51 seq.)
>W1711076426
LSLI01000009
Betaproteobacteria
Candidatus Gallionella acididurans [LSLI]
60119
60203
+
Leu
TAG
[ENA]
¡û
>W1711223903
LXTQ01000001
Betaproteobacteria
Methylobacillus sp. MM3 MM2 [LXTQ]
358908
358824
-
Leu
TAG
[ENA]
¡û
>W1711339971
MCAW01000001
Betaproteobacteria
Methylophilales bacterium LSUCC0135 [MCAW]
228557
228641
+
Leu
TAG
[ENA]
¡û
>W1711421855
MIAE01000275
Betaproteobacteria
Sideroxydans sp. RIFOXYB12_FULL_59_6 [MIAE]
1473
1389
-
Leu
TAG
[ENA]
¡û
>W1711680572
MRWL01000844
Betaproteobacteria
Sulfuricella sp. BIN3 [MRWL]
1935
1851
-
Leu
TAG
[ENA]
¡û
>W1711747627
MUKT01000031
Betaproteobacteria
Chromobacterium haemolyticum [MUKT]
48208
48292
+
Leu
TAG
[ENA]
¡û
>W1711747672
MUKU01000009
Betaproteobacteria
Chromobacterium haemolyticum [MUKU]
171318
171402
+
Leu
TAG
[ENA]
¡û
>W1711747784
MUKV01000037
Betaproteobacteria
Chromobacterium haemolyticum [MUKV]
32057
32141
+
Leu
TAG
[ENA]
¡û
>WENV180038491
FZPX01000161
[FZPX] metagenome; underground water
2307
2391
+
Leu
TAG
[ENA]
¢þ
>WENV180261727
OBEQ011320657
[OBEQ] groundwater metagenome; groundwater
747
663
-
Leu
TAG
[ENA]
¢þ
>WENV180266255
OBEQ011735068
[OBEQ] groundwater metagenome; groundwater
400
484
+
Leu
TAG
[ENA]
¢þ
>WENV180343006
OBLJ01241619
[OBLJ] soil metagenome; Clay
251
167
-
Leu
TAG
[ENA]
¢þ
>WENV180351597
OBLQ010077358
[OBLQ] soil metagenome; soil
479
563
+
Leu
TAG
[ENA]
¢þ
>WENV181288082
OFGY01008132
[OFGY] soil metagenome; Clay
721
805
+
Leu
TAG
[ENA]
¢þ
>WENV181293510
OFHG01006025
[OFHG] soil metagenome; Clay
2073
1989
-
Leu
TAG
[ENA]
¢þ
>WENV183678838
ORJL011930356
[ORJL] groundwater metagenome; groundwater
383
467
+
Leu
TAG
[ENA]
¢þ
>WENV170000129
AERA01014531
[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
163
79
-
Leu
TAG
[ENA]
¢þ
>WENV170557219
CXWL01021581
[CXWL] groundwater metagenome; biofilm material
1696
1612
-
Leu
TAG
[ENA]
¢þ
>WENV170557795
CXWL01038091
[CXWL] groundwater metagenome; biofilm material
3997
3913
-
Leu
TAG
[ENA]
¢þ
>WENV170559565
CXWL01129336
[CXWL] groundwater metagenome; biofilm material
2881
2965
+
Leu
TAG
[ENA]
¢þ
>WENV170559726
CXWL01143034
[CXWL] groundwater metagenome; biofilm material
937
853
-
Leu
TAG
[ENA]
¢þ
>WENV170559894
CXWL01169508
[CXWL] groundwater metagenome; biofilm material
2998
2914
-
Leu
TAG
[ENA]
¢þ
>WENV170574809
FLYN01010417
[FLYN] hot springs metagenome; Sediment
3194
3110
-
Leu
TAG
[ENA]
¢þ
>WENV170705394
LNAO01000049
[LNAO] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
11396
11480
+
Leu
TAG
[ENA]
¢þ
>WENV170706504
LNAP01003684
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
2677
2761
+
Leu
TAG
[ENA]
¢þ
>WENV170961329
MLJW01000007
[MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for
156792
156876
+
Leu
TAG
[ENA]
¢þ
>C191083699
CP031968
Betaproteobacteria
Chromobacterium rhizoryzae JP2-74 [CP031968]
3427908
3427992
+
Leu
TAG
-
¡û
>W09134942
ACVF01000001
Betaproteobacteria
Sideroxydans lithotrophicus ES-1 [ACVF]
515361
515277
-
Leu
TAG
[ENA]
¡û
>W141778931
JONK01000005
Betaproteobacteria
Chromobacterium haemolyticum DSM 19808 [JONK]
121085
121001
-
Leu
TAG
[ENA]
¡û
>C09107584
CP001674
Betaproteobacteria
Methylovorus glucosotrophus SIP3-4 [CP001674]
1573010
1572926
-
Leu
TAG
[Ensembl]
¡û
>W1910647290
LXRL01000019
Betaproteobacteria
Chromobacterium haemolyticum IR17 [LXRL]
55228
55144
-
Leu
TAG
[ENA]
¡û
>W1910728355
MGWW01000276
Betaproteobacteria
Gallionellales bacterium RIFCSPHIGHO2_02_FULL_57_16 [MGWW]
2843
2759
-
Leu
TAG
[ENA]
¡û
>W1910728438
MGWZ01000115
Betaproteobacteria
Gallionellales bacterium RIFCSPLOWO2_02_FULL_57_47 [MGWZ]
9461
9377
-
Leu
TAG
[ENA]
¡û
>W1910728492
MGXB01000036
Betaproteobacteria
Gallionellales bacterium RIFCSPLOWO2_12_FULL_57_18 [MGXB]
9442
9358
-
Leu
TAG
[ENA]
¡û
>W1810483122
QARW01000002
Betaproteobacteria
Chromobacterium haemolyticum NRRL B-11053 [QARW]
1321557
1321473
-
Leu
TAG
[ENA]
¡û
>W1810483156
QARX01000001
Betaproteobacteria
Chromobacterium sp. Panama [QARX]
3195500
3195584
+
Leu
TAG
[ENA]
¡û
>ENV09001065
ABSQ01024607
Freshwater sediment metagenome lwMethenol_C1
128
44
-
Leu
TAG
[ENA]
¡û
>C10111882
CP001965
Betaproteobacteria
Sideroxydans lithotrophicus ES-1 [CP001965]
1861251
1861167
-
Leu
TAG
[Ensembl]
¡û
>WENV11100487
AERA01014531
[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
163
79
-
Leu
TAG
[ENA]
¡û
>C11114217
CP002252
Betaproteobacteria
Methylovorus sp. MP688 [CP002252]
1573036
1572952
-
Leu
TAG
[Ensembl]
¡û
>W1511344583
JRFR01000037
Betaproteobacteria
Chromobacterium haemolyticum T124 [JRFR]
5450
5534
+
Leu
TAG
[ENA]
¡û
>W1511640553
LDUI01000001
Betaproteobacteria
Chromobacterium sp. LK1 [LDUI]
97096
97012
-
Leu
TAG
[ENA]
¡û
>W1511641311
LDUR01000032
Betaproteobacteria
Chromobacterium sp. LK11 [LDUR]
26927
26843
-
Leu
TAG
[ENA]
¡û
>W11187303
CAEE01000069
Betaproteobacteria
Chromobacterium haemolyticum C-61 [CAEE]
21452
21536
+
Leu
TAG
[ENA]
¡û
>WENV058647
AACY023336966
Marine microbial communities from Global Ocean Sampling (GOS)
1451
1365
-
Leu
TAG
[ENA]
>W121126938
CAEE01000069
Betaproteobacteria
Chromobacterium haemolyticum C-61 [CAEE]
21452
21536
+
Leu
TAG
[ENA]
¡û
>W1610915731
LSLI01000009
Betaproteobacteria
Candidatus Gallionella acididurans [LSLI]
60119
60203
+
Leu
TAG
[ENA]
¡û
>W1611008274
LXTQ01000001
Betaproteobacteria
Methylobacillus sp. MM3 MM2 [LXTQ]
358908
358824
-
Leu
TAG
[ENA]
¡û
>WENV080855
ABEF01007661
Marine planktonic communities from Hawaii Ocean Times Series Station (HOT/ALOHA)
224
138
-
Leu
TAG
[ENA]
>W1710561347
FOOC01000002
Gammaproteobacteria
Fontimonas thermophila [FOOC]
161795
161879
+
Leu
TAG
[ENA]
¡û
>W1710602231
FUYB01000001
Gammaproteobacteria
Thiothrix eikelboomii [FUYB]
142642
142558
-
Leu
TAG
[ENA]
¡û
Identical group No.191097 (18 seq.)
>W131164726
ARBA01000002
Betaproteobacteria
Methylotenera mobilis 13 [ARBA]
790532
790616
+
Leu
TAG
[ENA]
¡û
>W131186191
ARVX01000001
Betaproteobacteria
Methylotenera versatilis 79 [ARVX]
1953514
1953598
+
Leu
TAG
[ENA]
¡û
>W131186550
ARWF01000001
Betaproteobacteria
Methylotenera sp. 73s [ARWF]
224212
224296
+
Leu
TAG
[ENA]
¡û
>WENV181187874
OEOE01000789
[OEOE] activated sludge metagenome; Activated Sludge
1270
1354
+
Leu
TAG
[ENA]
¢þ
>WENV181379939
OFRD01015254
[OFRD] wastewater metagenome; Exp Tend CN 100WW
1154
1070
-
Leu
TAG
[ENA]
¢þ
>WENV181845795
OGVX01009402
[OGVX] freshwater metagenome; freshwater
252
336
+
Leu
TAG
[ENA]
¢þ
>WENV170558817
CXWL01093233
[CXWL] groundwater metagenome; biofilm material
91
7
-
Leu
TAG
[ENA]
¢þ
>WENV170961464
MLJW01000057
[MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for
52156
52240
+
Leu
TAG
[ENA]
¢þ
>W141819362
JQMG01000001
Betaproteobacteria
Methylotenera sp. L2L1 [JQMG]
1921966
1922050
+
Leu
TAG
[ENA]
¡û
>W1910730019
MHBU01000001
Betaproteobacteria
Methylotenera sp. RIFCSPLOWO2_02_FULL_45_14 [MHBU]
50227
50143
-
Leu
TAG
[ENA]
¡û
>ENV09000137
ABSN01016812
Freshwater sediment metagenome lwFormaldehyde_C1
649
733
+
Leu
TAG
[ENA]
¡û
>ENV09000957
ABSQ01002348
Freshwater sediment metagenome lwMethenol_C1
1058
974
-
Leu
TAG
[ENA]
¡û
>ENV09001039
ABSQ01020873
Freshwater sediment metagenome lwMethenol_C1
216
132
-
Leu
TAG
[ENA]
¡û
>ENV09001125
ABSQ01036370
Freshwater sediment metagenome lwMethenol_C1
176
92
-
Leu
TAG
[ENA]
¡û
>ENV09001507
ABSR01020457
Freshwater sediment metagenome lwMethylamine_C1
581
497
-
Leu
TAG
[ENA]
¡û
>ENV09001532
ABSR01024756
Freshwater sediment metagenome lwMethylamine_C1
616
532
-
Leu
TAG
[ENA]
¡û
>ENV09001565
ABSR01030293
Freshwater sediment metagenome lwMethylamine_C1
130
46
-
Leu
TAG
[ENA]
¡û
>C10109369
CP002056
Betaproteobacteria
Methylotenera versatilis 301 [CP002056]
1717214
1717130
-
Leu
TAG
[Ensembl]
¡û
Identical group No.225907 (1 seq.)
>ENV09000972
ABSQ01006527
Freshwater sediment metagenome lwMethenol_C1
399
316
-
Leu
TAG
[ENA]
¡û
Identical group No.225908 (1 seq.)
>ENV09001092
ABSQ01031352
Freshwater sediment metagenome lwMethenol_C1
534
451
-
Leu
TAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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