tRNA genes clustered and arranged according to each identical group

Freshwater sediment metagenome lwMethenol_C1

Anticodon = TCC

HIT: 6 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.408590 (1 seq.)
>ENV09001015 ABSQ01016216 Freshwater sediment metagenome lwMethenol_C1 130 206 + Gly TCC [ENA] ¡û
Identical group No.537978 (5 seq.)
>W1911385596 NVQB01000001 Bacteroidota Sphingobacteriaceae bacterium SH-48 [NVQB] 4809982 4809907 - Gly TCC [ENA] ¡û
>SRA1003675 SRR002327.113312 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 180 105 - Gly TCC [SRA]
>SRA1004297 SRR002328.255095 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 173 248 + Gly TCC [SRA]
>ENV09000214 ABSN01031530 Freshwater sediment metagenome lwFormaldehyde_C1 286 213 - Gly TCC [ENA] ¡û
>ENV09001181 ABSQ01044388 Freshwater sediment metagenome lwMethenol_C1 463 538 + Gly TCC [ENA] ¡û
Identical group No.604469 (3 seq.)
>WENV170961458 MLJW01000054 [MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for 41848 41773 - Gly TCC [ENA] ¢þ
>ENV09001044 ABSQ01021434 Freshwater sediment metagenome lwMethenol_C1 309 234 - Gly TCC [ENA] ¡û
>C10109341 CP002056 Betaproteobacteria Methylotenera versatilis 301 [CP002056] 357536 357611 + Gly TCC [Ensembl] ¡û
Identical group No.689322 (13 seq.)
>W1711391149 MEKI01000160 Acidobacteriota Acidobacteria bacterium RBG_13_68_16 [MEKI] 48138 48212 + Gly TCC [ENA] ¡û
>WENV180026690 FTIU01023499 [FTIU] metagenome; soil 529 455 - Gly TCC [ENA] ¢þ
>WENV180028329 FTJA01096835 [FTJA] metagenome; soil 263 189 - Gly TCC [ENA] ¢þ
>WENV180094877 MTBK01036647 [MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge 19053 18979 - Gly TCC [ENA] ¢þ
>WENV180284631 OBID01073795 [OBID] metagenome; sludge 421 347 - Gly TCC [ENA] ¢þ
>WENV180304544 OBJI01117670 [OBJI] soil metagenome; soil 6 80 + Gly TCC [ENA] ¢þ
>WENV180331345 OBLA01008310 [OBLA] soil metagenome; Alaskan Permafrost 185 111 - Gly TCC [ENA] ¢þ
>WENV181155580 OEID01268485 [OEID] soil metagenome; soil 172 98 - Gly TCC [ENA] ¢þ
>WENV183092494 OLLE01000325 [OLLE] soil metagenome; soil 16536 16610 + Gly TCC [ENA] ¢þ
>WENV170557673 CXWL01033478 [CXWL] groundwater metagenome; biofilm material 1625 1551 - Gly TCC [ENA] ¢þ
>WENV170771528 LXNI01001790 [LXNI] sponge metagenome; marine sponge reef 8907 8981 + Gly TCC [ENA] ¢þ
>W141696047 JMFG01000037 Acidobacteriota Thermoanaerobaculum aquaticum [JMFG] 271 197 - Gly TCC [ENA] ¡û
>ENV09001130 ABSQ01036855 Freshwater sediment metagenome lwMethenol_C1 597 671 + Gly TCC [ENA] ¡û
Identical group No.797826 (6 seq.)
>WENV183661793 ORJL010136987 [ORJL] groundwater metagenome; groundwater 817 744 - Gly TCC [ENA] ¢þ
>WENV183689170 ORMF011399431 [ORMF] groundwater metagenome; groundwater 3589 3516 - Gly TCC [ENA] ¢þ
>WENV170176600 CEOS01097897 [CEOS] marine metagenome genome assembly TARA_056_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 466 539 + Gly TCC [ENA] ¢þ
>ENV09000845 ABSP01048807 Freshwater sediment metagenome lwMethane_C1 329 256 - Gly TCC [ENA] ¡û
>ENV09001247 ABSQ01055635 Freshwater sediment metagenome lwMethenol_C1 403 476 + Gly TCC [ENA] ¡û
>WENV077955 AAFX01135146 Soil microbial communities from Minnesota Farm 169 242 + Gly TCC [ENA]
Identical group No.821268 (1 seq.)
>ENV09000922 ABSQ01000220 Freshwater sediment metagenome lwMethenol_C1 778 851 + Gly TCC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
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