tRNA genes clustered and arranged according to each identical group

Freshwater sediment metagenome lwMethylamine_C1

Anticodon = TGG

HIT: 8 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.268731 (1 seq.)
>ENV09001588 ABSR01033912 Freshwater sediment metagenome lwMethylamine_C1 199 122 - Pro TGG [ENA] ¡û
Identical group No.303514 (43 seq.)
>W131164720 ARBA01000001 Betaproteobacteria Methylotenera mobilis 13 [ARBA] 100983 100907 - Pro TGG [ENA] ¡û
>W131164748 ARBA01000003 Betaproteobacteria Methylotenera mobilis 13 [ARBA] 660413 660337 - Pro TGG [ENA] ¡û
>W131186205 ARVX01000001 Betaproteobacteria Methylotenera versatilis 79 [ARVX] 674636 674560 - Pro TGG [ENA] ¡û
>W131186567 ARWF01000001 Betaproteobacteria Methylotenera sp. 73s [ARWF] 1554106 1554030 - Pro TGG [ENA] ¡û
>WENV180099060 MTBK01284931 [MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge 1223 1299 + Pro TGG [ENA] ¢þ
>WENV181189049 OEOF01000037 [OEOF] activated sludge metagenome; Activated Sludge 13228 13304 + Pro TGG [ENA] ¢þ
>WENV181379712 OFRD01006614 [OFRD] wastewater metagenome; Exp Tend CN 100WW 337 261 - Pro TGG [ENA] ¢þ
>WENV170558762 CXWL01088777 [CXWL] groundwater metagenome; biofilm material 1698 1774 + Pro TGG [ENA] ¢þ
>WENV170577504 FSSH01000094 [FSSH] freshwater metagenome; drinking water 10629 10705 + Pro TGG [ENA] ¢þ
>WENV170705460 LNAO01000611 [LNAO] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 1576 1500 - Pro TGG [ENA] ¢þ
>WENV170705833 LNAP01000436 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 48368 48292 - Pro TGG [ENA] ¢þ
>WENV170707068 LNAP01012147 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 4205 4129 - Pro TGG [ENA] ¢þ
>WENV170708647 LNAP01100863 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 31 107 + Pro TGG [ENA] ¢þ
>WENV170710976 LNFM01003165 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 32981 32905 - Pro TGG [ENA] ¢þ
>WENV170961526 MLJW01000110 [MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for 84457 84533 + Pro TGG [ENA] ¢þ
>WENV170961610 MLJW01000232 [MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for 30930 30854 - Pro TGG [ENA] ¢þ
>W141819346 JQMG01000001 Betaproteobacteria Methylotenera sp. L2L1 [JQMG] 955862 955938 + Pro TGG [ENA] ¡û
>W141819351 JQMG01000001 Betaproteobacteria Methylotenera sp. L2L1 [JQMG] 1091141 1091217 + Pro TGG [ENA] ¡û
>W1910730041 MHBU01000029 Betaproteobacteria Methylotenera sp. RIFCSPLOWO2_02_FULL_45_14 [MHBU] 22515 22591 + Pro TGG [ENA] ¡û
>C09107776 CP001672 Betaproteobacteria Methylotenera mobilis JLW8 [CP001672] 127754 127830 + Pro TGG [Ensembl] ¡û
>C09107779 CP001672 Betaproteobacteria Methylotenera mobilis JLW8 [CP001672] 239293 239369 + Pro TGG [Ensembl] ¡û
>W1911623983 PQVH01000006 Betaproteobacteria Methylotenera oryzisoli La3113 [PQVH] 88896 88820 - Pro TGG [ENA] ¡û
>W1911623996 PQVH01000010 Betaproteobacteria Methylotenera oryzisoli La3113 [PQVH] 99462 99386 - Pro TGG [ENA] ¡û
>ENV09000758 ABSP01031374 Freshwater sediment metagenome lwMethane_C1 324 400 + Pro TGG [ENA] ¡û
>ENV09001141 ABSQ01037617 Freshwater sediment metagenome lwMethenol_C1 405 481 + Pro TGG [ENA] ¡û
>ENV09001282 ABSR01000169 Freshwater sediment metagenome lwMethylamine_C1 555 631 + Pro TGG [ENA] ¡û
>ENV09001304 ABSR01000873 Freshwater sediment metagenome lwMethylamine_C1 1364 1288 - Pro TGG [ENA] ¡û
>ENV09001312 ABSR01001194 Freshwater sediment metagenome lwMethylamine_C1 2136 2212 + Pro TGG [ENA] ¡û
>ENV09001322 ABSR01001345 Freshwater sediment metagenome lwMethylamine_C1 1380 1304 - Pro TGG [ENA] ¡û
>ENV09001326 ABSR01001481 Freshwater sediment metagenome lwMethylamine_C1 4194 4270 + Pro TGG [ENA] ¡û
>ENV09001343 ABSR01002296 Freshwater sediment metagenome lwMethylamine_C1 823 747 - Pro TGG [ENA] ¡û
>ENV09001348 ABSR01002410 Freshwater sediment metagenome lwMethylamine_C1 664 740 + Pro TGG [ENA] ¡û
>ENV09001364 ABSR01003424 Freshwater sediment metagenome lwMethylamine_C1 26 102 + Pro TGG [ENA] ¡û
>ENV09001370 ABSR01003714 Freshwater sediment metagenome lwMethylamine_C1 1410 1334 - Pro TGG [ENA] ¡û
>ENV09001390 ABSR01004580 Freshwater sediment metagenome lwMethylamine_C1 4059 4135 + Pro TGG [ENA] ¡û
>ENV09001424 ABSR01006578 Freshwater sediment metagenome lwMethylamine_C1 1090 1014 - Pro TGG [ENA] ¡û
>ENV09001471 ABSR01013550 Freshwater sediment metagenome lwMethylamine_C1 266 190 - Pro TGG [ENA] ¡û
>ENV09001533 ABSR01025017 Freshwater sediment metagenome lwMethylamine_C1 10 86 + Pro TGG [ENA] ¡û
>C10109336 CP002056 Betaproteobacteria Methylotenera versatilis 301 [CP002056] 163400 163476 + Pro TGG [Ensembl] ¡û
>C10109361 CP002056 Betaproteobacteria Methylotenera versatilis 301 [CP002056] 2954670 2954594 - Pro TGG [Ensembl] ¡û
>W1511432014 JUGF01000002 Betaproteobacteria Methylotenera versatilis 7 [JUGF] 838327 838403 + Pro TGG [ENA] ¡û
>W1511433534 JUHH01000001 Betaproteobacteria Methylotenera sp. G11 [JUHH] 1954368 1954444 + Pro TGG [ENA] ¡û
>W1511433551 JUHH01000001 Betaproteobacteria Methylotenera sp. G11 [JUHH] 1727839 1727763 - Pro TGG [ENA] ¡û
Identical group No.310060 (10 seq.)
>W1710798311 LJTI01000019 Gammaproteobacteria Gammaproteobacteria bacterium SG8_31 [LJTI] 43566 43642 + Pro TGG [ENA] ¡û
>WENV180017079 FSWL01000051 [FSWL] metagenome; soil 7214 7290 + Pro TGG [ENA] ¢þ
>WENV180039573 LLBY010095808 [LLBY] soil metagenome; soil from tomato rhizosphere 2571 2495 - Pro TGG [ENA] ¢þ
>WENV180591207 OCOV01003796 [OCOV] marine metagenome; ENVO:01000301 957 881 - Pro TGG [ENA] ¢þ
>WENV180691557 OCZS010151771 [OCZS] soil metagenome; soil 258 334 + Pro TGG [ENA] ¢þ
>WENV170771810 LXNI01004422 [LXNI] sponge metagenome; marine sponge reef 307 231 - Pro TGG [ENA] ¢þ
>WENV170959717 MKWU01007427 [MKWU] sponge metagenome; 6948 7024 + Pro TGG [ENA] ¢þ
>ENV09001215 ABSQ01051039 Freshwater sediment metagenome lwMethenol_C1 239 315 + Pro TGG [ENA] ¡û
>ENV09001503 ABSR01019714 Freshwater sediment metagenome lwMethylamine_C1 346 422 + Pro TGG [ENA] ¡û
>W1610662268 LJTI01000019 Gammaproteobacteria Gammaproteobacteria bacterium SG8_31 [LJTI] 43566 43642 + Pro TGG [ENA] ¡û
Identical group No.430987 (2 seq.)
>W131231755 AUIS01000001 Acidithiobacillia Thermithiobacillus tepidarius DSM 3134 [AUIS] 70712 70636 - Pro TGG [ENA] ¡û
>ENV09001576 ABSR01032828 Freshwater sediment metagenome lwMethylamine_C1 134 210 + Pro TGG [ENA] ¡û
Identical group No.436598 (2 seq.)
>WENV183680513 ORMF010192645 [ORMF] groundwater metagenome; groundwater 6133 6209 + Pro TGG [ENA] ¢þ
>ENV09001521 ABSR01024205 Freshwater sediment metagenome lwMethylamine_C1 692 616 - Pro TGG [ENA] ¡û
Identical group No.441297 (1 seq.)
>ENV09001454 ABSR01010455 Freshwater sediment metagenome lwMethylamine_C1 162 236 + Pro TGG [ENA] ¡û
Identical group No.441299 (1 seq.)
>ENV09001477 ABSR01015080 Freshwater sediment metagenome lwMethylamine_C1 141 68 - Pro TGG [ENA] ¡û
Identical group No.441300 (1 seq.)
>ENV09001495 ABSR01018752 Freshwater sediment metagenome lwMethylamine_C1 701 625 - Pro TGG [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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