tRNA genes clustered and arranged according to each identical group

Marine metagenome, Gulf of Maine surface waters

Anticodon = CGA

HIT: 2 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.181944 (12 seq.)
>WENV181321820 OFKN01015247 [OFKN] marine metagenome; seawater 532 449 - Ser CGA [ENA] ¢þ
>WENV181329390 OFLX01000437 [OFLX] seawater metagenome; seawater 692 608 - Ser CGA [ENA] ¢þ
>WENV183616350 OOED01005023 [OOED] marine metagenome; seawater 370 286 - Ser CGA [ENA] ¢þ
>WENV183621907 OOFV01000609 [OOFV] marine metagenome; seawater 2113 2196 + Ser CGA [ENA] ¢þ
>WENV183630248 OOGS01000329 [OOGS] marine metagenome; seawater 396 313 - Ser CGA [ENA] ¢þ
>WENV170567122 FLLY01054800 [FLLY] seawater metagenome; seawater 168 85 - Ser CGA [ENA] ¢þ
>WENV170601393 FUWD010170892 [FUWD] metagenome; unknown 113 30 - Ser CGA [ENA] ¢þ
>WENV170604394 FUWD010392929 [FUWD] metagenome; unknown 261 178 - Ser CGA [ENA] ¢þ
>WENV170952014 MEHZ011580488 [MEHZ] marine metagenome; marine surface water 74 157 + Ser CGA [ENA] ¢þ
>WENV171002780 NHNJ01162950 [NHNJ] marine metagenome; surface waters at 20 m depth at the end of the Scripps Institution of Oceanography (SIO) pier 152 69 - Ser CGA [ENA] ¢þ
>WENV11101332 AGBE01001791 Marine metagenome, Gulf of Maine surface waters 614 697 + Ser CGA [ENA] ¡û
>WENV11101394 AGBE01002164 Marine metagenome, Gulf of Maine surface waters 4190 4107 - Ser CGA [ENA] ¡û
Identical group No.181945 (17 seq.)
>A171007070 CP021324 Nitrososphaerota Candidatus Nitrosomarinus catalina SPOT01 [CP021324] 773951 773868 - Ser CGA - ¡û
>WENV180115651 OAPT01016002 [OAPT] marine metagenome; seawater 357 274 - Ser CGA [ENA] ¢þ
>WENV180595051 OCPB01007888 [OCPB] marine metagenome; ENVO:00002149 537 454 - Ser CGA [ENA] ¢þ
>WENV170113722 CENF01099149 [CENF] marine metagenome genome assembly TARA_004_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2417 2334 - Ser CGA [ENA] ¢þ
>WENV170154228 CEOF01183574 [CEOF] marine metagenome genome assembly TARA_018_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 135 52 - Ser CGA [ENA] ¢þ
>WENV170272305 CERK01064216 [CERK] marine metagenome genome assembly TARA_066_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3320 3403 + Ser CGA [ENA] ¢þ
>WENV170285660 CERW01008235 [CERW] marine metagenome genome assembly TARA_066_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1700 1617 - Ser CGA [ENA] ¢þ
>WENV170502547 CEVV01003835 [CEVV] marine metagenome genome assembly TARA_152_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2309 2226 - Ser CGA [ENA] ¢þ
>WENV170508573 CEVX01172777 [CEVX] marine metagenome genome assembly TARA_152_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2475 2558 + Ser CGA [ENA] ¢þ
>WENV170566723 FLLY01000393 [FLLY] seawater metagenome; seawater 2018 2101 + Ser CGA [ENA] ¢þ
>WENV170617639 FUWD012932960 [FUWD] metagenome; unknown 931 848 - Ser CGA [ENA] ¢þ
>WENV170756823 LUMP01001823 [LUMP] marine metagenome; Red Sea water column Station 12 - depth 47m 655 572 - Ser CGA [ENA] ¢þ
>WENV170951912 MEHZ011576287 [MEHZ] marine metagenome; marine surface water 322 239 - Ser CGA [ENA] ¢þ
>WENV11101349 AGBE01001943 Marine metagenome, Gulf of Maine surface waters 15139 15222 + Ser CGA [ENA] ¡û
>WENV057020 AACY023280169 Marine microbial communities from Global Ocean Sampling (GOS) 843 757 - Ser CGA [ENA]
>WENV074513 AACY023980303 Marine microbial communities from Global Ocean Sampling (GOS) 786 700 - Ser CGA [ENA]
>W1610855504 LQMW01000006 Nitrososphaerota Nitrosopumilus sp. Nsub [LQMW] 26908 26825 - Ser CGA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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